Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J09
(855 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 25 0.67
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 24 1.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 24 2.1
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.7
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.7
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.7
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 3.6
AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor pro... 23 4.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 4.7
AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 8.3
AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 8.3
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 25.4 bits (53), Expect = 0.67
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 364 IPLPTRRVNNPAPAVRPITMFDQPIPWAPKVKY 462
+PLP N P P RP F P+ PK+K+
Sbjct: 21 VPLP----NVPQPGRRPFPTFPGQGPFNPKIKW 49
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 24.2 bits (50), Expect = 1.6
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 20 DYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPXTIQFVYQRYTPVSXRPIWRSS--PM 193
D+L+N + +P+HV G PQ L+ T Q Q++ P+ SS P
Sbjct: 87 DWLANANSPVGSPSAALQPQHVVYGNPQQQQLAAETQQ--QQQHNNGYASPMSTSSYDPY 144
Query: 194 TPPSTTRVGR 223
+P S ++GR
Sbjct: 145 SPNS--KIGR 152
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 112 PLPXYYSVCISTIYPGLRETH 174
P+P S C+ + Y L+E H
Sbjct: 184 PVPTVTSACVGSAYTPLKEDH 204
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +3
Query: 6 DSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRLLFSLYINDIPR 158
+++Y C+ + +I + E++P PV PP P + IPR
Sbjct: 344 NNNYNNNCKKLYYNIINIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPR 394
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 226 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 363
A LH + W + +I++NP+ + V KR P+ ++
Sbjct: 825 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 870
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.7
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 226 ALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTLS 363
A LH + W + +I++NP+ + V KR P+ ++
Sbjct: 821 ATLHCEVHGDTPVTVTWLKGGKIELNPSTNYRVTVKREVTPDGVIA 866
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 392 TPPPPFAQSRCSTSPYRGPRRS 457
TP P AQ YRGP S
Sbjct: 1339 TPVPRLAQDSSEDESYRGPSAS 1360
>AF442147-1|AAL35348.1| 33|Apis mellifera abaecin precursor
protein.
Length = 33
Score = 22.6 bits (46), Expect = 4.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 364 IPLPTRRVNNPAPAVRPITMFDQPIPWAPKV 456
+PLP N P P RP F P+ PK+
Sbjct: 7 VPLP----NVPQPGRRPFPTFPGQGPFNPKI 33
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 69 PGPVTSQPESRKAPPSPRLL 128
PG V PE++ PPS L+
Sbjct: 287 PGEVDLPPETQPTPPSATLV 306
>AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase
protein.
Length = 492
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 447 GPRYGLVEHRDWANGGG 397
GPR GL+ W GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168
>AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase
protein.
Length = 628
Score = 21.8 bits (44), Expect = 8.3
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 447 GPRYGLVEHRDWANGGG 397
GPR GL+ W GGG
Sbjct: 152 GPRNGLLPLLVWIYGGG 168
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,658
Number of Sequences: 438
Number of extensions: 6482
Number of successful extensions: 24
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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