Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J08
(848 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 48 1e-07
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 46 4e-07
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 45 7e-07
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 45 7e-07
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 45 7e-07
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 32 0.007
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.33
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 25 1.00
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 24 1.7
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 23 2.3
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 22 5.3
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.0
DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein. 21 9.3
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 9.3
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 47.6 bits (108), Expect = 1e-07
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 466
++ +LW+PDV++ N+A G + V +NGS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 467 QTCTFKFGSRMHNSDEMDFVID 532
Q C KFGS ++ +++D V++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +1
Query: 178 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 273
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 466
++ +LW+PDV++ N+A G + V +NGS ++ + + + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDD 139
Query: 467 QTCTFKFGSRMHNSDEMDFVID 532
Q C KFGS ++ +++D V++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +1
Query: 178 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 273
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 45.2 bits (102), Expect = 7e-07
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 466
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 467 QTCTFKFGSRMHNSDEMDFVID 532
Q C KFGS ++ +++D V++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 45.2 bits (102), Expect = 7e-07
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 466
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 467 QTCTFKFGSRMHNSDEMDFVID 532
Q C KFGS ++ +++D V++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 45.2 bits (102), Expect = 7e-07
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +2
Query: 290 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 466
++ +LW+PDV++ N+A G + V + GS ++ + M + +P D
Sbjct: 80 ITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDD 139
Query: 467 QTCTFKFGSRMHNSDEMDFVID 532
Q C KFGS ++ +++D V++
Sbjct: 140 QHCDMKFGSWTYDGNQLDLVLN 161
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/32 (28%), Positives = 13/32 (40%)
Frame = +1
Query: 178 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 273
++ E + A L + W D L WN G
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYG 73
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 31.9 bits (69), Expect = 0.007
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
Frame = +2
Query: 272 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 424
G T V SE +W PD +N ATT+ ++ RV ++GS++ RL I+
Sbjct: 108 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSITRSIRLTIT 164
Query: 425 TPISMQLDNWPNDMQTCTFKFGS 493
M L P D Q C + S
Sbjct: 165 ASCPMNLQYLPMDRQLCHIEIES 187
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 362 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 463
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 24.6 bits (51), Expect = 1.00
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +1
Query: 622 SSRGNVPXVFPGDAPRHT 675
SS + P VFP DAP H+
Sbjct: 182 SSSSSPPGVFPVDAPMHS 199
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 23.8 bits (49), Expect = 1.7
Identities = 11/49 (22%), Positives = 24/49 (48%)
Frame = -1
Query: 182 MLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQ 36
+++ L C + T +L S GE+R ++ + S + S + +A+
Sbjct: 228 VVSTLSCYLERTELLRSSGETRLFLTHRKPFHPASTQSLSRWIKMVLAE 276
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.4 bits (48), Expect = 2.3
Identities = 9/25 (36%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -2
Query: 637 HCHASFHLATVLAL-HRTGQSRHIP 566
HCH FH+ +AL + G+ +P
Sbjct: 603 HCHIEFHVEVGMALVFKIGEDYEMP 627
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 22.2 bits (45), Expect = 5.3
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +2
Query: 554 ESGAWDVTALSSAVQSQDRGEVEARVAMFXMSFRE 658
E W+ +A S +QDRGE R + +E
Sbjct: 151 EQYVWESSAGGSFTVTQDRGEPLGRGTKIVLHMKE 185
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.0
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 409 LYPG-DGAVIRYTGAESVVPGGGC 341
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>DQ211693-1|ABB16909.1| 314|Tribolium castaneum dorsocross protein.
Length = 314
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 261 RXSGAAALGWCPRN 302
+ S A ALGW P N
Sbjct: 153 KASTAQALGWAPTN 166
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.4 bits (43), Expect = 9.3
Identities = 16/64 (25%), Positives = 25/64 (39%)
Frame = -1
Query: 200 VDSDSRMLACLKCRVRLTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQVRRNG 21
V S+S CR I + ++ V+ + +DS AF+ +AQV
Sbjct: 56 VSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTEMLLKKDSSEAFNEFRTKILAQVHGTN 115
Query: 20 NXNN 9
N N
Sbjct: 116 NGTN 119
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,808
Number of Sequences: 336
Number of extensions: 3901
Number of successful extensions: 29
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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