BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_J08 (848 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4... 30 0.36 SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 27 4.4 SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-ace... 26 5.9 SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|S... 26 7.8 >SPAC4F8.01 |did4|SPAC644.03c, vps2|vacuolar sorting protein Did4|Schizosaccharomyces pombe|chr 1|||Manual Length = 210 Score = 30.3 bits (65), Expect = 0.36 Identities = 11/25 (44%), Positives = 19/25 (76%) Frame = +3 Query: 189 VRVHRANTGRSSNELDRQTTELERR 263 +R H+ + GR+ ELDR+ T+L++R Sbjct: 18 LRAHQRSLGRAERELDRERTKLDQR 42 >SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 650 Score = 26.6 bits (56), Expect = 4.4 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +2 Query: 368 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHN 505 RA +++ + +KR DI + DNW ND+ C + G +H+ Sbjct: 588 RAVIAHMLELDPVKRYDIHRVFA---DNWINDISMCHMENGKVIHS 630 >SPAC56E4.02c |alg13||N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase Alg13 |Schizosaccharomyces pombe|chr 1|||Manual Length = 162 Score = 26.2 bits (55), Expect = 5.9 Identities = 11/31 (35%), Positives = 17/31 (54%) Frame = -1 Query: 113 YVARSESIMRDSDVAFSHSAALAIAQVRRNG 21 Y ES + D+ + SH+ A +I Q R+G Sbjct: 63 YAPEIESYIHDASIVISHAGAGSILQTLRSG 93 >SPAC25H1.09 |mde5|meu30, SPAC4A8.01|alpha-amylase homolog Mde5|Schizosaccharomyces pombe|chr 1|||Manual Length = 513 Score = 25.8 bits (54), Expect = 7.8 Identities = 11/36 (30%), Positives = 18/36 (50%) Frame = +2 Query: 452 WPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSMFES 559 WP D+ T FG+ D D + D+ +Y M ++ Sbjct: 105 WPQDLYTLNPHFGTEQDLIDLADALHDRGMYLMVDT 140 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,052,411 Number of Sequences: 5004 Number of extensions: 59963 Number of successful extensions: 172 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 172 length of database: 2,362,478 effective HSP length: 72 effective length of database: 2,002,190 effective search space used: 420459900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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