Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J07
(873 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 44 2e-06
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 44 2e-06
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 41 1e-05
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 40 3e-05
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 40 3e-05
AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory recept... 23 4.1
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.2
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 7.2
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.6
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 43.6 bits (98), Expect = 2e-06
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 456
+LW+PDV++ N+A G + V +NGS ++
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYV 119
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDXMDFXI 580
P D Q C KFGS ++ + +D +
Sbjct: 136 PFDDQHCDMKFGSWTYDGNQLDLVL 160
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 43.6 bits (98), Expect = 2e-06
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 456
+LW+PDV++ N+A G + V +NGS ++
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYV 119
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDXMDFXI 580
P D Q C KFGS ++ + +D +
Sbjct: 136 PFDDQHCDMKFGSWTYDGNQLDLVL 160
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 41.1 bits (92), Expect = 1e-05
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 172 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 348
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 349 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 456
+LW+PDV++ N+A G + V + GS ++
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYV 119
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDXMDFXI 580
P D Q C KFGS ++ + +D +
Sbjct: 136 PFDDQHCDMKFGSWTYDGNQLDLVL 160
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 39.5 bits (88), Expect = 3e-05
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 445 VSWI 456
++
Sbjct: 116 CLYV 119
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDXMDFXI 580
P D Q C KFGS ++ + +D +
Sbjct: 136 PFDDQHCDMKFGSWTYDGNQLDLVL 160
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 39.5 bits (88), Expect = 3e-05
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 271 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 444
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 445 VSWI 456
++
Sbjct: 116 CLYV 119
Score = 23.0 bits (47), Expect = 3.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 506 PNDMQTCTFKFGSRMHNSDXMDFXI 580
P D Q C KFGS ++ + +D +
Sbjct: 136 PFDDQHCDMKFGSWTYDGNQLDLVL 160
>AM292348-1|CAL23160.2| 346|Tribolium castaneum gustatory receptor
candidate 27 protein.
Length = 346
Score = 22.6 bits (46), Expect = 4.1
Identities = 12/56 (21%), Positives = 22/56 (39%)
Frame = +1
Query: 34 SCHKMSTTYIILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVV 201
+C ++ T + F TC I +CE + +D ++ R KI +
Sbjct: 174 ACISIAYTNVSTDAFFYTCLIQIETQCEIVSDTLRNLDKIVTNGFRNVAESRKIFI 229
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 459 LYPG-DGAVIRYTGAESVVPGGGC 391
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 412 ALRARVSNNGSVSWIKRLDISTPISMQLDNW 504
A+ + N + SW + ++ + + M LDNW
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNW 302
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.4 bits (43), Expect = 9.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 114 AFCRTSYSTSEEKR*QNNIS 55
A C YST EEK Q N S
Sbjct: 1374 AVCDACYSTIEEKNLQVNES 1393
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,897
Number of Sequences: 336
Number of extensions: 3448
Number of successful extensions: 20
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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