Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J06
(888 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 149 1e-34
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 134 2e-30
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 134 3e-30
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 132 1e-29
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 124 2e-27
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 122 9e-27
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 119 9e-26
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 117 3e-25
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 108 2e-22
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 107 4e-22
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 107 5e-22
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 97 5e-19
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 95 2e-18
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 95 2e-18
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 89 2e-16
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 84 4e-15
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 84 5e-15
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 78 3e-13
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 75 2e-12
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 73 1e-11
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 69 2e-10
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 67 6e-10
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 65 2e-09
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 58 4e-07
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 57 5e-07
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 57 5e-07
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 56 9e-07
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 54 6e-06
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 50 8e-05
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 48 2e-04
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 48 3e-04
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 47 7e-04
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.028
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 38 0.34
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 38 0.34
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 37 0.79
UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of str... 36 1.0
UniRef50_Q7YWV7 Cluster: Putative uncharacterized protein; n=2; ... 36 1.8
UniRef50_Q17641 Cluster: Putative uncharacterized protein; n=11;... 36 1.8
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 33 7.4
UniRef50_UPI0000DD83F5 Cluster: PREDICTED: similar to keratin as... 33 9.7
UniRef50_Q8CJI7 Cluster: Putative secreted beta-galactosidase; n... 33 9.7
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 149 bits (360), Expect = 1e-34
Identities = 71/90 (78%), Positives = 79/90 (87%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+YKR++DG ++INL+RTWEKL+LAARA+VAIENPADV VISSR GQRAVLKFAA TGAT
Sbjct: 38 IYKRKSDGIYIINLKRTWEKLLLAARAIVAIENPADVSVISSRNTGQRAVLKFAAATGAT 97
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
PIAGRFTPG FTNQIQAAFREPRL P
Sbjct: 98 PIAGRFTPGTFTNQIQAAFREPRLLVVTDP 127
Score = 40.7 bits (91), Expect = 0.048
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLG 151
MSG LDVL + EEDV K LAA THLG
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLG 26
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 134 bits (325), Expect = 2e-30
Identities = 62/86 (72%), Positives = 70/86 (81%)
Frame = +1
Query: 181 PILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTG 360
P ++ R DG HVIN+ +TWEKLVLAAR + AI NP DV ISSR FGQRAVLKFAAHTG
Sbjct: 35 PYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPEDVVAISSRTFGQRAVLKFAAHTG 94
Query: 361 ATPIAGRFTPGAFTNQIQAAFREPRL 438
ATPIAGRFTPG+FTN I +F+EPRL
Sbjct: 95 ATPIAGRFTPGSFTNYITRSFKEPRL 120
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 134 bits (324), Expect = 3e-30
Identities = 59/84 (70%), Positives = 73/84 (86%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
++K + DG +IN+R+TWEKL+LAAR + AIENPADV V++++PFGQRA+LKFA +TGA
Sbjct: 38 VFKTKGDGVPIINVRKTWEKLLLAARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAF 97
Query: 367 PIAGRFTPGAFTNQIQAAFREPRL 438
PIAGRFTPG FTNQIQ AFREPRL
Sbjct: 98 PIAGRFTPGTFTNQIQKAFREPRL 121
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLG 151
MSGGL+VL++ E+DVTK+LAA THLG
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLG 26
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 132 bits (319), Expect = 1e-29
Identities = 60/90 (66%), Positives = 71/90 (78%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
++KRR+DG H++NL +TWEKLVLAAR + IENPADV V+S+R +G RAVLKFAAHTGAT
Sbjct: 40 VWKRRSDGVHILNLGKTWEKLVLAARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGAT 99
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
IAGRFTPG FTN I +REPRL P
Sbjct: 100 AIAGRFTPGNFTNYITRTYREPRLIVVTDP 129
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 124 bits (300), Expect = 2e-27
Identities = 57/92 (61%), Positives = 70/92 (76%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
++KRR DG ++ NL +TWEKL +AAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA
Sbjct: 42 VFKRRNDGIYIFNLGKTWEKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAN 101
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
IAGR TPG FTNQ+Q +F EPRL P T
Sbjct: 102 AIAGRHTPGTFTNQMQTSFSEPRLLILTDPRT 133
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 122 bits (295), Expect = 9e-27
Identities = 55/92 (59%), Positives = 70/92 (76%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
++KRRADG H+INL +TW+KL+LAAR +VA+ENP DV ++RP+GQRAVLKFA +TGA
Sbjct: 61 VWKRRADGIHIINLGKTWDKLMLAARVIVAVENPQDVIAQAARPYGQRAVLKFAQYTGAK 120
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
+AGR TPG +TNQ A F EPR+ P T
Sbjct: 121 ALAGRHTPGTYTNQKDAVFAEPRVLVVTDPRT 152
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 119 bits (287), Expect = 9e-26
Identities = 53/90 (58%), Positives = 66/90 (73%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+Y R +G H+I+L +TWEKL+LAARA+ AIENPADV +I +P QR LKF +TG T
Sbjct: 38 VYDRNDEGNHIIHLNKTWEKLLLAARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTT 97
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
+ GRFTPGAFTNQIQ+ F+EPRL P
Sbjct: 98 SVPGRFTPGAFTNQIQSGFKEPRLLIVCDP 127
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLGA 154
MSGG++ L L E+D+ M+AA HLG+
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGS 27
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 117 bits (282), Expect = 3e-25
Identities = 57/96 (59%), Positives = 67/96 (69%)
Frame = +1
Query: 175 WRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAH 354
W P + G +INL +TWEKL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +
Sbjct: 35 WDPRNGNFKWSGIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQY 94
Query: 355 TGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
TGA IAGR TPG FTNQ+Q +F EPRL P T
Sbjct: 95 TGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRT 130
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 108 bits (259), Expect = 2e-22
Identities = 58/85 (68%), Positives = 63/85 (74%)
Frame = +1
Query: 184 ILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGA 363
+L D + R EKL+LAARA+ AIEN ADV VISSR GQRAVLKFAA TGA
Sbjct: 117 VLQMNEEDVLKFLAARTHSEKLLLAARAIAAIENLADVSVISSRNTGQRAVLKFAAATGA 176
Query: 364 TPIAGRFTPGAFTNQIQAAFREPRL 438
TPIAG FTPG FT+QIQAAFREPRL
Sbjct: 177 TPIAGCFTPGTFTSQIQAAFREPRL 201
Score = 36.7 bits (81), Expect = 0.79
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +2
Query: 59 QISATMSGGLDVLALNEEDVTKMLAATTH 145
Q + TM G DVL +NEEDV K LAA TH
Sbjct: 106 QETFTMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 107 bits (257), Expect = 4e-22
Identities = 50/98 (51%), Positives = 66/98 (67%)
Frame = +1
Query: 169 SRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFA 348
++ R +Y R +G H+INL T EKL +AARA+V + NP +V V+S+RP+G RAVLKF+
Sbjct: 32 NKMRKYVYSRTQEGVHLINLAHTLEKLKVAARAIVTVSNPEEVVVVSARPYGSRAVLKFS 91
Query: 349 AHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
+ G+ PIAGR+ PG TNQI F EPRL P T
Sbjct: 92 HYVGSHPIAGRWIPGTLTNQITQKFIEPRLLVATDPRT 129
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 107 bits (256), Expect = 5e-22
Identities = 51/114 (44%), Positives = 71/114 (62%)
Frame = +1
Query: 121 QNACCNHPSWGRIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVF 300
Q H +G ++ + ++ R +GT++I+L TWEKL+LAAR + A+ENP DV
Sbjct: 36 QKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQDVT 95
Query: 301 VISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+ P T
Sbjct: 96 VCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRT 149
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 97.1 bits (231), Expect = 5e-19
Identities = 51/104 (49%), Positives = 62/104 (59%)
Frame = +1
Query: 151 GRIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQR 330
G L+ +P ++ R DGTHVINL T+EK+ LAAR + A+E P DV IS++ FG R
Sbjct: 24 GSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYAVEEPKDVLAISTKSFGTR 83
Query: 331 AVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
AV KFA GA + RFTPG FTN F EPRL P T
Sbjct: 84 AVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDPNT 127
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 95.1 bits (226), Expect = 2e-18
Identities = 41/84 (48%), Positives = 60/84 (71%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
++ R+ DGT V NL++ W K+V AAR +V I++PA++ V+++RP QRA+LKF +T AT
Sbjct: 43 IFDRQKDGTFVFNLQKVWAKIVFAARILVTIDDPAEIAVVANRPDAQRAILKFCKYTHAT 102
Query: 367 PIAGRFTPGAFTNQIQAAFREPRL 438
GRF PG FTN++ + EPRL
Sbjct: 103 AFPGRFIPGNFTNRMNPNYCEPRL 126
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/86 (52%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIEN--PADVFVISSRPFGQRAVLKFAAHTG 360
+Y+R + + NL +TWEKL LAAR + I N P+DV ++ R RA LKF +TG
Sbjct: 47 VYERGNNNECIFNLMKTWEKLSLAARVIAGISNETPSDVVAVAGREMAHRASLKFMKYTG 106
Query: 361 ATPIAGRFTPGAFTNQIQAAFREPRL 438
T +AGRFTPG+FTNQIQ F EPRL
Sbjct: 107 CTAVAGRFTPGSFTNQIQKKFMEPRL 132
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 88.6 bits (210), Expect = 2e-16
Identities = 44/91 (48%), Positives = 61/91 (67%), Gaps = 4/91 (4%)
Frame = +1
Query: 196 RRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPI- 372
R +G++++NL TW+ + LAAR + AIE P DV V+SSRP GQRAV+KFA +T A+
Sbjct: 66 RSDNGSYILNLEETWQHIKLAARVIAAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTR 125
Query: 373 AGRFTPGAFTNQIQAA---FREPRLFDCIGP 456
+ R+TPG TNQ +A F+EP+L P
Sbjct: 126 SARWTPGTLTNQSNSASGKFQEPQLLIVTDP 156
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 84.2 bits (199), Expect = 4e-15
Identities = 41/81 (50%), Positives = 60/81 (74%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+YKR +G ++NL R++EKL+ A +VA+++P++V VISSR GQ A+LK AA +GA+
Sbjct: 21 IYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVISSRNSGQWAMLKLAAASGAS 78
Query: 367 PIAGRFTPGAFTNQIQAAFRE 429
P G FT G FT+Q+QA+ RE
Sbjct: 79 PTVGHFTSGTFTSQVQASCRE 99
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 83.8 bits (198), Expect = 5e-15
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +1
Query: 196 RRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIA 375
R D ++I++ TWEKL++AARA I++P+ + V+S++ FG++ V+KF GATPI
Sbjct: 46 RPRDRINIIDINATWEKLIIAARAFCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPIT 105
Query: 376 GRFTPGAFTNQIQAAFREPRL 438
GRF PG+FTN +PR+
Sbjct: 106 GRFIPGSFTNSEVKRVYDPRV 126
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 78.2 bits (184), Expect = 3e-13
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Frame = +1
Query: 193 KRRADGTHVINLRRTWEKLVLAAR---AVVAIENPADVFVISSRPFGQRAVLKFAAHTGA 363
+R+ADG+ I + WEK++ AAR VV ++NPA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 364 TPIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
IA RFTPG+ TN + F+E R+ I P
Sbjct: 70 INIADRFTPGSSTNYVTRWFKETRVIIVIDP 100
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 75.4 bits (177), Expect = 2e-12
Identities = 33/91 (36%), Positives = 56/91 (61%)
Frame = +1
Query: 166 TSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKF 345
T + ++K+R+DG ++IN+ +T +K+ LAARA+++IE+P + +SS Q A++KF
Sbjct: 24 TQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEHPKHIIAVSSNNIHQTAIIKF 83
Query: 346 AAHTGATPIAGRFTPGAFTNQIQAAFREPRL 438
+ I ++ PG TN+ F EPRL
Sbjct: 84 SQFIQCNCIVDKWIPGKLTNKTSKLFEEPRL 114
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 72.9 bits (171), Expect = 1e-11
Identities = 35/102 (34%), Positives = 59/102 (57%)
Frame = +1
Query: 151 GRIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQR 330
G + +S +P ++K R DG +++++++T KL++A + + E P D+ V++ R + R
Sbjct: 20 GTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQYAFR 78
Query: 331 AVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
V KFA TGAT I GRF PG TN ++E ++ P
Sbjct: 79 PVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/99 (34%), Positives = 57/99 (57%)
Frame = +1
Query: 166 TSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKF 345
T +Y+ RA+G +V+++R+ E+L +AA+ + + P D+ V++SRP+ R V KF
Sbjct: 55 TKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDIIVVASRPYAYRPVQKF 113
Query: 346 AAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
A G+ + GR PG FTN + + EP++ P T
Sbjct: 114 AEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRT 152
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 66.9 bits (156), Expect = 6e-10
Identities = 34/102 (33%), Positives = 55/102 (53%)
Frame = +1
Query: 151 GRIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQR 330
G M + P +Y R DG +++++++T E++ +AA+ ++A +P+ V+S R +G R
Sbjct: 28 GTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAK-MIARYDPSKFVVVSGRQYGHR 86
Query: 331 AVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
V KF G P+ GR PG FTN + F E L P
Sbjct: 87 PVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDP 128
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = +1
Query: 166 TSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKF 345
T +Y+ R+DG +V+++R+T E+L +AA+ + E P D+ +S R + + +F
Sbjct: 26 TKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVSRRIYTMGPLEEF 84
Query: 346 AAHTGATPIAGRFTPGAFTNQIQAAFREPRL 438
+TG +AGRF PG TN F EP +
Sbjct: 85 GKYTGIRTVAGRFVPGTLTNPAYKGFMEPEV 115
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 57.6 bits (133), Expect = 4e-07
Identities = 39/90 (43%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Frame = +1
Query: 190 YKRRADGTHVINLRRTWEKLVLA-ARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
Y ++DGT++ L RTWEKL+L A+ VA EN +V +ISS G TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISS--LGTN-------FTGAI 107
Query: 367 PIAGRFTPGAFTNQIQAAFREPRLFDCIGP 456
P AG F P F N IQA F+ L GP
Sbjct: 108 PTAGSFIPRPFINLIQATFQVTCLLVVTGP 137
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 57.2 bits (132), Expect = 5e-07
Identities = 32/76 (42%), Positives = 46/76 (60%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+YK++ DG +VIN R +L ++ ++ V SSR GQ+AVL FAA G+
Sbjct: 15 VYKKKRDGMYVIN-RSFCSQL----EPLLPLKTQLMSVVTSSRTTGQQAVLSFAAAVGSA 69
Query: 367 PIAGRFTPGAFTNQIQ 414
P +GRFTPG T+Q+Q
Sbjct: 70 PTSGRFTPGTLTDQVQ 85
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 57.2 bits (132), Expect = 5e-07
Identities = 28/82 (34%), Positives = 50/82 (60%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+Y+ R DG +V++++ T E++ +A++ +++ +PA + V+SSR +GQ F+ G
Sbjct: 63 VYRVRTDGLYVLDIQSTDERIRVASK-LLSHYDPARILVVSSRQYGQHPARMFSRALGTR 121
Query: 367 PIAGRFTPGAFTNQIQAAFREP 432
+ GRF PG+ TN F EP
Sbjct: 122 AMLGRFIPGSLTNPQIHGFFEP 143
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 56.4 bits (130), Expect = 9e-07
Identities = 27/48 (56%), Positives = 31/48 (64%)
Frame = +1
Query: 319 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLFDCIGPCT 462
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP L P T
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPIT 80
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 53.6 bits (123), Expect = 6e-06
Identities = 25/76 (32%), Positives = 40/76 (52%)
Frame = +1
Query: 178 RPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHT 357
R ++ R DG + NL+R E++ +AAR + P+ V V S++P+ + + F
Sbjct: 40 RGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PSRVMVHSTKPYAFKPIQMFCKFV 98
Query: 358 GATPIAGRFTPGAFTN 405
G P+ GR PG TN
Sbjct: 99 GCLPVTGRLIPGTLTN 114
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 50.0 bits (114), Expect = 8e-05
Identities = 24/32 (75%), Positives = 24/32 (75%)
Frame = +1
Query: 334 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE 429
VLK TGA PIAG FTPG FTNQIQAAF E
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSE 76
Score = 36.3 bits (80), Expect = 1.0
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLGA 154
MSG LD+L + E+D+ +LAA THLG+
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGS 27
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/82 (34%), Positives = 42/82 (51%)
Frame = +1
Query: 187 LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGAT 366
+++ R DG +V+++ T E++ AA + E P + SSR +G+ KFA GA
Sbjct: 105 IHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQILAASSRQYGRFPAEKFAEAIGAR 163
Query: 367 PIAGRFTPGAFTNQIQAAFREP 432
GRF PG TN + EP
Sbjct: 164 VRTGRFIPGTLTNPDYDGYIEP 185
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 48.0 bits (109), Expect = 3e-04
Identities = 27/92 (29%), Positives = 45/92 (48%)
Frame = +1
Query: 163 LTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLK 342
LT +P + K R DG + ++R+ E+L LA++ + E P ++ V+ R + K
Sbjct: 22 LTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRRETAITPIKK 80
Query: 343 FAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 438
F+ T GR+ PG TN + EP +
Sbjct: 81 FSEITKVKAFPGRYPPGTLTNPQLKYYMEPEV 112
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 46.8 bits (106), Expect = 7e-04
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = -1
Query: 156 SAPRWVVAASILVTSSSLRASTSNPPDIVALI*VTTKRV*CHWE 25
S PRWVVA +ILV SSSLR S PPD++ + T R C WE
Sbjct: 50 SEPRWVVATNILVMSSSLRDRISKPPDMLTWKELRTSR--CRWE 91
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.5 bits (93), Expect = 0.028
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 334 VLKFAAHTGATPIAGRFTPGAF 399
+LKFAA TGATPIAG FTPG F
Sbjct: 1 MLKFAAATGATPIAGHFTPGTF 22
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 37.9 bits (84), Expect = 0.34
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLGAES 160
MSGGL+ LAL E+DV K LA+ H+G+ +
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSN 29
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 37.9 bits (84), Expect = 0.34
Identities = 22/77 (28%), Positives = 37/77 (48%)
Frame = +1
Query: 208 GTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFT 387
GT+ ++L T ++ AA+ + +++ V S + + + KFA G I RF
Sbjct: 43 GTYTLDLEATQGRIKAAAQ-FIEHTGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFM 101
Query: 388 PGAFTNQIQAAFREPRL 438
PG TN + EP+L
Sbjct: 102 PGTLTNPDLPKYMEPKL 118
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 36.7 bits (81), Expect = 0.79
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Frame = +1
Query: 166 TSRWRPI----LYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRA 333
TS W P +Y R G H+I+L T L AAR V + A + + GQ
Sbjct: 144 TSLWNPANSRYIYGVR-QGVHMISLETTAAHLRRAARVVEEVAYNAGLILFVGNRKGQME 202
Query: 334 VLKFAAH-TGATPIAGRFTPGAFTNQ 408
++ AA GA + ++TPG TN+
Sbjct: 203 IVTQAAEMAGACHLFTKWTPGGITNR 228
>UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 36.3 bits (80), Expect = 1.0
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 178 RPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLK-FAAH 354
+P +Y R DG +I+L +T +L AAR A+ + + GQ+ L+ +
Sbjct: 197 QPFIYGVR-DGISIIDLEQTVTQLRRAARITEAVAKQNGLILFVGTRDGQKLALEAMSRR 255
Query: 355 TGATPIAGRFTPGAFTN 405
GA+ + ++ PGA TN
Sbjct: 256 CGASYVHSKWIPGAITN 272
>UniRef50_Q7YWV7 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 212
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>UniRef50_Q17641 Cluster: Putative uncharacterized protein; n=11;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 197
Score = 35.5 bits (78), Expect = 1.8
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 33.5 bits (73), Expect = 7.4
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +1
Query: 208 GTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAA-HTGATPIAGRF 384
G H+I+L +T L AA+ V + + + GQ+ L+ AA T ++ R+
Sbjct: 216 GIHIIDLNQTLSYLKRAAKVVEGVSESGGIILFLGTRQGQKRGLEEAAKKTHGYYVSTRW 275
Query: 385 TPGAFTNQIQ 414
PG TN +
Sbjct: 276 IPGTLTNSTE 285
>UniRef50_UPI0000DD83F5 Cluster: PREDICTED: similar to keratin
associated protein 9.2; n=1; Homo sapiens|Rep:
PREDICTED: similar to keratin associated protein 9.2 -
Homo sapiens
Length = 301
Score = 33.1 bits (72), Expect = 9.7
Identities = 30/95 (31%), Positives = 34/95 (35%), Gaps = 1/95 (1%)
Frame = +3
Query: 93 CSPSTRKMSPKCLLQPPILGQNHVN-FQMETYSLQTTC*WYPCDQLASYLGKTCSGCSCC 269
C PS +P C QP G + T Q TC C + S TC G SCC
Sbjct: 151 CQPSCCS-TPCC--QPTCCGSSCCGQTSCGTTCCQPTCCQPTCCRNTS-CQPTCCGSSCC 206
Query: 270 RSHREPR*CVRHLITALRSACCTEVCRAHRCYAYC 374
+ P C T RS CC C C C
Sbjct: 207 QPCCHPTCCQ----TICRSTCCQPSCVTRCCSTPC 237
>UniRef50_Q8CJI7 Cluster: Putative secreted beta-galactosidase; n=1;
Streptomyces coelicolor|Rep: Putative secreted
beta-galactosidase - Streptomyces coelicolor
Length = 933
Score = 33.1 bits (72), Expect = 9.7
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +1
Query: 154 RIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAV-VAIENPADVFVISSRPFGQR 330
R+ S WR +L K RA G + +++R W + A A D+F+ ++ G
Sbjct: 85 RLPSPSLWRDVLQKMRAYGHNAVDVRLAWNQHSPAPGAYDFTGVRDLDLFLRTAAECGLY 144
Query: 331 AVLKFAAHTGATPIAGRFTPGAFT 402
VL H GA AG PG T
Sbjct: 145 VVLHPGPHIGADVDAGGL-PGWLT 167
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 700,051,589
Number of Sequences: 1657284
Number of extensions: 14839854
Number of successful extensions: 30422
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 29297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30357
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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