Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J06
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 165 NFQMETYSLQTTC*WYPCDQLA 230
           N   +TYS  TTC +Y  D L+
Sbjct: 103 NNNFKTYSNVTTCSYYSLDDLS 124


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/28 (32%), Positives = 11/28 (39%)
 Frame = -1

Query: 558  CPTNX*WGVXXCTKPIHQECLTYEASVM 475
            CP    W    C  P + EC    +S M
Sbjct: 2265 CPNGLFWNKDHCDWPENTECHPDASSTM 2292


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 388 PGAFTNQIQAAFREPRLFDCIGPCTRXSTHY 480
           PGAF   + +   + ++ D  GP  R  + Y
Sbjct: 256 PGAFRTTLGSELSKVKVIDMTGPQQRVLSGY 286


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 273 YDSTSSQNKFFPG 235
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,101
Number of Sequences: 336
Number of extensions: 3721
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)