Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J06
(888 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 134 6e-32
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.051
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.051
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.051
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 30 1.9
U13070-12|AAK67222.1| 405|Caenorhabditis elegans Hypothetical p... 29 4.4
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 7.8
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 7.8
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 7.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 134 bits (325), Expect = 6e-32
Identities = 60/96 (62%), Positives = 77/96 (80%)
Frame = +1
Query: 151 GRIMLTSRWRPILYKRRADGTHVINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQR 330
G L + + +YKRR DG ++IN+++TWEKL+LAARA+ A+ENPADV V+S+RP+ QR
Sbjct: 26 GSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAARAIAAVENPADVVVVSARPYAQR 85
Query: 331 AVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRL 438
A+LKFAAHTGAT I GRF+PG TNQIQ F+EPRL
Sbjct: 86 ALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRL 121
Score = 33.5 bits (73), Expect = 0.21
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +2
Query: 74 MSGGLDVLALNEEDVTKMLAATTHLGA 154
MSGG AL EEDV K+LA HLG+
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGS 27
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.039
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.051
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 255 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 377
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = +3
Query: 252 SGCSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCFY*PDPSC 419
S SCC S C+ + +S+C T +C+ +C C T PSC
Sbjct: 38 SSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGPSC 92
>U13070-12|AAK67222.1| 405|Caenorhabditis elegans Hypothetical
protein F01F1.11 protein.
Length = 405
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 453 SNTIEETRFTECSLDLVSKSTWCETSRNRRSTGV--RGKLQY 334
+NT E++F + L L++ S +TS N R+TGV LQY
Sbjct: 166 TNTNSESKFDKIDLSLMNLSHCQQTSYNIRATGVFSNADLQY 207
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 183 YSLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLITALRSACCTEV-CRAH 356
Y TC PC++ S TC G SC C+++ E C R + + + C+
Sbjct: 469 YRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPC 528
Query: 357 RCYAYCGT 380
C+ + T
Sbjct: 529 FCFGHSST 536
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 183 YSLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLITALRSACCTEV-CRAH 356
Y TC PC++ S TC G SC C+++ E C R + + + C+
Sbjct: 469 YRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPC 528
Query: 357 RCYAYCGT 380
C+ + T
Sbjct: 529 FCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +3
Query: 183 YSLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLITALRSACCTEV-CRAH 356
Y TC PC++ S TC G SC C+++ E C R + + + C+
Sbjct: 469 YRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPC 528
Query: 357 RCYAYCGT 380
C+ + T
Sbjct: 529 FCFGHSST 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,902,196
Number of Sequences: 27780
Number of extensions: 367595
Number of successful extensions: 746
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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