Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J04
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 258 3e-69
Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.022
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical ... 28 7.6
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 258 bits (633), Expect = 3e-69
Identities = 127/248 (51%), Positives = 160/248 (64%), Gaps = 2/248 (0%)
Frame = +1
Query: 76 LESIINNNLTGRDLEEFNRIHFGRRNNLEIKLKESSIXXXXXXXXXXXXXXF--PAKDEQ 249
+E+ + L G L+E RI +GR L+ SSI + A+ EQ
Sbjct: 11 VETALAEKLDGVSLDEVERILYGRPYRA---LEISSIAEKLAQDGDFQLSGYIVDAQKEQ 67
Query: 250 TRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPF 429
TR PR+V+V IQ+ I PT V EQ+ AI +V +I+ A G N+I QE W MPF
Sbjct: 68 TRAPRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPF 127
Query: 430 AFCTREKQPWCEFAESAEDGPTTTFLRELAIRYAMVIVSSILERDEKHSDILWNTAVVIS 609
AFCTRE+ PW EFAES GPTT FL +LA+++ +VI+S ILERDE+ D++WNTAVVIS
Sbjct: 128 AFCTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVIS 187
Query: 610 DTGNVIGKHRKNHIPRVGDFNESNYYMEGNTGHPVFAXRYGKIAVXICFGRDHVLNWMMF 789
TG VIG+ RKNHIPRVGDFNES YYME GHPVF +YG+I + IC+GR H NWMM+
Sbjct: 188 HTGRVIGRSRKNHIPRVGDFNESTYYMESTLGHPVFETKYGRIGINICYGRHHPQNWMMY 247
Query: 790 GXNGXEIV 813
NG EI+
Sbjct: 248 ALNGAEII 255
>Z35604-6|CAA84681.1| 305|Caenorhabditis elegans Hypothetical
protein ZK1058.6 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.022
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 14/156 (8%)
Frame = +1
Query: 331 KKAIFNKVKKIIDVAGQEGVNIICFQEL-------WN-MPFAFCTREKQPWCEFA---ES 477
K A KVKK ++ A G ++ F E WN TR + EF E+
Sbjct: 16 KPATLEKVKKNVEEAAGNGAELVLFPEAFIGGYPKWNSFGITMGTRTPEGRKEFKRYFEN 75
Query: 478 A--EDGPTTTFLRELAIRYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHI 651
A E+G + + LA + + IV ++ER+ + L+ + S +G +GKHRK +
Sbjct: 76 AIEENGEESKLIESLAAQNNIHIVIGVVERE---ASTLYCSVFFYSPSG-YLGKHRKL-L 130
Query: 652 PRVGDFNESNYYMEGN-TGHPVFAXRYGKIAVXICF 756
P E + +G+ + PVF+ GKI IC+
Sbjct: 131 PTA---LERCVWGQGDGSTMPVFSTSVGKIGSAICW 163
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 638 RCFPITFPVSLMTTAVFQSMSECFSSLSNIEDT-ITIAYLMASSRRKVVV 492
+C P+TF ++ T + F+++ IE+T I IA L+ + V++
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENTAIAIATLVKGTEGDVLL 124
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 334 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 468
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 334 KAIFNKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 468
K +F+ ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z67880-1|CAA91794.1| 256|Caenorhabditis elegans Hypothetical
protein C34E7.3 protein.
Length = 256
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = -3
Query: 512 SRRKVVVGPSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSWPATS 366
SR K+ +S+ + HG + +V+ AK F + +++ +TPS P T+
Sbjct: 197 SRMKIRKDSNSSKKEDMEHGDWWIVRVAKMGFESCFQRRRITPSPPPTN 245
>AF016416-8|AAB65271.1| 388|Caenorhabditis elegans Hypothetical
protein F29A7.1 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.6
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +1
Query: 586 WNTAVVISDTGNVIGKHRKNHIPRVGDFNESNYYM 690
WN + + D ++ + H+ R GD+ NY++
Sbjct: 266 WNKKIAMKDVPFIVYSPQFEHVIRGGDWENENYFL 300
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,462,367
Number of Sequences: 27780
Number of extensions: 392205
Number of successful extensions: 1135
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1135
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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