Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J03
(858 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00005A4873 Cluster: PREDICTED: similar to sno, straw... 317 2e-85
UniRef50_A3KN83 Cluster: Strawberry notch homolog 1; n=47; Coelo... 317 2e-85
UniRef50_O01737 Cluster: Notch signaling pathway homolog protein... 270 2e-71
UniRef50_UPI00006A00CB Cluster: KIAA0963; n=4; Euteleostomi|Rep:... 241 1e-62
UniRef50_Q9Y2G9 Cluster: Strawberry notch homolog 2; n=33; Eutel... 241 2e-62
UniRef50_UPI000065D7D3 Cluster: KIAA0963; n=1; Takifugu rubripes... 237 3e-61
UniRef50_Q25AI3 Cluster: H0702G05.10 protein; n=9; Magnoliophyta... 233 4e-60
UniRef50_Q4S240 Cluster: Chromosome undetermined SCAF14764, whol... 231 2e-59
UniRef50_O64516 Cluster: YUP8H12R.3 protein; n=1; Arabidopsis th... 221 2e-56
UniRef50_Q0J779 Cluster: Os08g0223700 protein; n=5; Eukaryota|Re... 200 2e-53
UniRef50_Q4S3C6 Cluster: Chromosome 1 SCAF14751, whole genome sh... 185 1e-45
UniRef50_Q00UP9 Cluster: Nuclear helicase MOP-3/SNO; n=3; Eukary... 149 9e-35
UniRef50_A4RV70 Cluster: Predicted protein; n=2; Ostreococcus|Re... 140 4e-32
UniRef50_A3IYX5 Cluster: Putative uncharacterized protein; n=1; ... 134 2e-30
UniRef50_Q0LRT3 Cluster: Probably methylase/helicase; n=2; Caulo... 134 3e-30
UniRef50_Q98NX1 Cluster: Probably methylase/helicase; n=34; Alph... 131 2e-29
UniRef50_Q8YL46 Cluster: Alr7089 protein; n=9; Bacteria|Rep: Alr... 130 3e-29
UniRef50_Q0FH07 Cluster: Putative methylase/helicase; n=1; Roseo... 130 3e-29
UniRef50_A3VJ09 Cluster: Probably methylase/helicase; n=7; cellu... 130 4e-29
UniRef50_Q8KW06 Cluster: RC184; n=18; Rhodobacterales|Rep: RC184... 128 1e-28
UniRef50_A3IS38 Cluster: Probably methylase/helicase; n=1; Cyano... 126 7e-28
UniRef50_Q1GW10 Cluster: Putative methylase/helicase; n=6; Sphin... 124 3e-27
UniRef50_O85862 Cluster: Probably methylase/helicase; n=12; Sphi... 123 5e-27
UniRef50_A7RYE6 Cluster: Predicted protein; n=1; Nematostella ve... 71 5e-11
UniRef50_Q5WDB0 Cluster: Levanase; n=1; Bacillus clausii KSM-K16... 34 5.3
UniRef50_Q4A375 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
UniRef50_A1W696 Cluster: Helicase domain protein; n=3; Betaprote... 33 9.2
UniRef50_A0DVH9 Cluster: Chromosome undetermined scaffold_66, wh... 33 9.2
>UniRef50_UPI00005A4873 Cluster: PREDICTED: similar to sno, strawberry
notch homolog 1 isoform 6; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to sno, strawberry
notch homolog 1 isoform 6 - Canis familiaris
Length = 1414
Score = 317 bits (779), Expect = 2e-85
Identities = 158/219 (72%), Positives = 168/219 (76%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S
Sbjct: 351 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 410
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA
Sbjct: 411 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 469
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L
Sbjct: 470 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 529
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G +F+ V S + WV A
Sbjct: 530 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 568
>UniRef50_A3KN83 Cluster: Strawberry notch homolog 1; n=47;
Coelomata|Rep: Strawberry notch homolog 1 - Homo sapiens
(Human)
Length = 1393
Score = 317 bits (779), Expect = 2e-85
Identities = 158/219 (72%), Positives = 168/219 (76%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S
Sbjct: 351 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 410
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA
Sbjct: 411 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 469
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L
Sbjct: 470 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 529
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G +F+ V S + WV A
Sbjct: 530 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 568
>UniRef50_O01737 Cluster: Notch signaling pathway homolog protein 1;
n=2; Caenorhabditis|Rep: Notch signaling pathway homolog
protein 1 - Caenorhabditis elegans
Length = 1451
Score = 270 bits (663), Expect = 2e-71
Identities = 133/220 (60%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGET-A 230
VS+DLK+DAERDLRD GA I VY LNK KYAKIS NG++KKGV+FATY+SLIGE
Sbjct: 330 VSSDLKFDAERDLRDCGAPNIPVYALNKMKYAKISGKENGSIKKGVMFATYTSLIGECRG 389
Query: 231 SNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPK 410
+ + KYRSR+ QL+QW G+D+DGVI+ DECH+AKNL P K TKTG LELQ LP
Sbjct: 390 AKSRKYRSRISQLIQWFGQDYDGVIILDECHRAKNLVPTAGAKPTKTGRMVLELQKALPN 449
Query: 411 ARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLX 590
ARVVYASATGA+EPRNMAYM RLG+WGE FP F DFI+AV RGVGAM I AMD
Sbjct: 450 ARVVYASATGATEPRNMAYMTRLGLWGERQAFPEFHDFISAVERRGVGAMEIVAMDMKQR 509
Query: 591 XMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
+Y+ R LSF G SF V S F W+ A
Sbjct: 510 GLYLARQLSFRGVSFAVQEVQLSSEFVKMYDAAVKLWMEA 549
>UniRef50_UPI00006A00CB Cluster: KIAA0963; n=4; Euteleostomi|Rep:
KIAA0963 - Xenopus tropicalis
Length = 1099
Score = 241 bits (591), Expect = 1e-62
Identities = 125/219 (57%), Positives = 147/219 (67%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDL+ DAERDLRDI AG I V+ LNK KY SS+ +GV+FATYS+LIGE+ +
Sbjct: 137 VSNDLRCDAERDLRDINAGHIAVHALNKIKYGDTSSS------EGVLFATYSALIGESQA 190
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
++R+R+KQ+ WCGE FDGVIVFDECHKAKN +TK G LELQN LP A
Sbjct: 191 GG-QHRTRIKQIRDWCGEKFDGVIVFDECHKAKN------ASSTKMGRAVLELQNNLPMA 243
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEP+NM YM RLGIWGEGT F TF DF++A+ RGVGAM I AMD +
Sbjct: 244 RVVYASATGASEPKNMIYMSRLGIWGEGTSFSTFDDFLHAIEKRGVGAMEIVAMDMKVSG 303
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G +FR +P + W A
Sbjct: 304 MYIARQLSFSGVTFRIEEIPLEESYKHMYNRAAQLWAEA 342
>UniRef50_Q9Y2G9 Cluster: Strawberry notch homolog 2; n=33;
Euteleostomi|Rep: Strawberry notch homolog 2 - Homo
sapiens (Human)
Length = 1391
Score = 241 bits (589), Expect = 2e-62
Identities = 126/219 (57%), Positives = 151/219 (68%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDLKYDAERDLRDI A I V+ L+K KY +++ +GV+FATYS+LIGE+ +
Sbjct: 333 VSNDLKYDAERDLRDIEATGIAVHALSKIKYGDTTTS------EGVLFATYSALIGESQA 386
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
++R+RL+Q+L WCGE F+GVIVFDECHKAKN GS TK G L+LQNKLP A
Sbjct: 387 GG-QHRTRLRQILDWCGEAFEGVIVFDECHKAKN---AGS---TKMGKAVLDLQNKLPLA 439
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEPRNM YM RLGIWGEGTPF F +F++A+ RGVGAM I AMD +
Sbjct: 440 RVVYASATGASEPRNMIYMSRLGIWGEGTPFRNFEEFLHAIEKRGVGAMEIVAMDMKVSG 499
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G +FR +P + F W A
Sbjct: 500 MYIARQLSFSGVTFRIEEIPLAPAFECVYNRAALLWAEA 538
>UniRef50_UPI000065D7D3 Cluster: KIAA0963; n=1; Takifugu
rubripes|Rep: KIAA0963 - Takifugu rubripes
Length = 1123
Score = 237 bits (580), Expect = 3e-61
Identities = 121/219 (55%), Positives = 148/219 (67%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
+SNDLK+DAERDL+DI A I V LNK KY +++ +GV+FATYS+LIGE+ +
Sbjct: 219 ISNDLKFDAERDLKDIDAPHIPVLALNKIKYGDTATS------EGVLFATYSALIGESQA 272
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
++R+R+KQ+L WC DFDGVI+FDECHKAKN +TK G L+LQN+LP+A
Sbjct: 273 GG-QHRTRIKQILDWCKPDFDGVIIFDECHKAKN------ATSTKMGKAVLDLQNQLPRA 325
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEP+NM YM RLGIWGEGTPF TF DF++A+ RGVGAM I AMD +
Sbjct: 326 RVVYASATGASEPKNMIYMSRLGIWGEGTPFRTFDDFLHAIEKRGVGAMEIVAMDMKVSG 385
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G SFR + F W A
Sbjct: 386 MYIARQLSFSGVSFRIEEIGLDNDFKLVYNKAAKLWAEA 424
>UniRef50_Q25AI3 Cluster: H0702G05.10 protein; n=9;
Magnoliophyta|Rep: H0702G05.10 protein - Oryza sativa
(Rice)
Length = 1326
Score = 233 bits (570), Expect = 4e-60
Identities = 108/200 (54%), Positives = 142/200 (71%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
+ +DLKYDA RDL D+GA ++V+PLNK Y+K+ S G +K GV+F TYSSLI +
Sbjct: 340 IGSDLKYDARRDLDDVGAKCVQVHPLNKLPYSKLDSKAIG-IKNGVIFVTYSSLI----A 394
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
++ + RSRL+QL+QWCG++FDG++VFDECHKAKNL P + T+TG LE+Q KLP+A
Sbjct: 395 SSERGRSRLQQLVQWCGQEFDGLLVFDECHKAKNLIPDAGSQPTRTGKAVLEIQEKLPEA 454
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVY SATGASEPRN+ YMVRLG+WG+GT F F F+ ++ GVGA+ + AMD
Sbjct: 455 RVVYCSATGASEPRNLGYMVRLGLWGDGTSFQNFAQFLGSLEKGGVGALELVAMDMKARG 514
Query: 594 MYIXRXLSFXGXSFRXXXVP 653
MY+ R LS+ G F P
Sbjct: 515 MYVCRTLSYKGVDFDIVEAP 534
>UniRef50_Q4S240 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=4; Euteleostomi|Rep:
Chromosome undetermined SCAF14764, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1477
Score = 231 bits (564), Expect = 2e-59
Identities = 126/220 (57%), Positives = 142/220 (64%), Gaps = 28/220 (12%)
Frame = +3
Query: 135 KFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFD 314
+FKY KISS NG+VKKGV+FATYSSLIGE+ S KY++R +QLL WCGEDFDGVIV+D
Sbjct: 413 QFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGG-KYKTRFQQLLHWCGEDFDGVIVYD 471
Query: 315 ECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGE 494
ECHKAKN+CPVGS K TKTGL LELQNKLPKARVVYASATGASEPRNMAYM RLGIWG
Sbjct: 472 ECHKAKNVCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGP 531
Query: 495 GTP---FPTFMD-------------------------FINAVXXRGVGAMXIXAMDXXLX 590
TP F F+ ++ + RGVGAM I AMD L
Sbjct: 532 KTPFREFSNFIQAVERRCVRRYTPQHSKDRVTVFSNLYVLILYFRGVGAMEIVAMDMKLR 591
Query: 591 XMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G +F+ VP S + WV A
Sbjct: 592 GMYIARQLSFTGVTFKIEEVPLSQKYISMYNKSVKLWVRA 631
>UniRef50_O64516 Cluster: YUP8H12R.3 protein; n=1; Arabidopsis
thaliana|Rep: YUP8H12R.3 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1257
Score = 221 bits (540), Expect = 2e-56
Identities = 103/194 (53%), Positives = 137/194 (70%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
+ +DLKYDA RDL D+GA + V PLNK Y+K+ S N +K+GVVF TY+SLI +
Sbjct: 309 IGSDLKYDARRDLDDVGATCVGVNPLNKLPYSKLDSK-NVGIKEGVVFLTYNSLI----A 363
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
++ K RSRL+QL+QWCG +FDG+++FDECHKAKNL P + T+ G +++Q+K+P+A
Sbjct: 364 SSEKGRSRLQQLVQWCGPEFDGLLIFDECHKAKNLVPEAGSQPTRIGQAVVDIQDKIPQA 423
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RV+Y SATGASEPRNM YMVRLG+WG GT F F F+ A+ G GA+ + AMD
Sbjct: 424 RVIYCSATGASEPRNMGYMVRLGLWGAGTSFSDFNKFLGALDKGGTGALELVAMDMKARG 483
Query: 594 MYIXRXLSFXGXSF 635
MY+ R LS+ G F
Sbjct: 484 MYVCRTLSYKGAEF 497
>UniRef50_Q0J779 Cluster: Os08g0223700 protein; n=5; Eukaryota|Rep:
Os08g0223700 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1424
Score = 200 bits (487), Expect(2) = 2e-53
Identities = 94/179 (52%), Positives = 123/179 (68%)
Frame = +3
Query: 117 EVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFD 296
+++ LNK Y+KI S G + GV+F TYSSLI +++ K RSRL+QL++WCG +FD
Sbjct: 380 DLHALNKLPYSKIDSKAVG-ITTGVIFVTYSSLI----ASSEKGRSRLQQLIEWCGSEFD 434
Query: 297 GVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVR 476
G++VFDECHKAKNL P + T+TG LE+Q LP+ARVVY SATGASEPRN+ YMVR
Sbjct: 435 GLLVFDECHKAKNLIPEAGSQPTRTGKAVLEIQEMLPEARVVYCSATGASEPRNLGYMVR 494
Query: 477 LGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMYIXRXLSFXGXSFRXXXVP 653
LG+WG+GT F F F+ A+ GVGA+ + AMD MY+ R LS+ G +F P
Sbjct: 495 LGLWGDGTSFQNFQKFLGALEKGGVGALELVAMDMKARGMYVCRTLSYKGAAFATVEAP 553
Score = 33.1 bits (72), Expect(2) = 2e-53
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIE 119
+ +DLKYDA RDL D+GA +E
Sbjct: 331 IGSDLKYDARRDLDDVGAKYVE 352
>UniRef50_Q4S3C6 Cluster: Chromosome 1 SCAF14751, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 1 SCAF14751, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1548
Score = 185 bits (450), Expect = 1e-45
Identities = 111/235 (47%), Positives = 136/235 (57%), Gaps = 40/235 (17%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNV---------------KKG 188
+SNDLK+DAERDL+DI A I V LNK +IS + +G
Sbjct: 143 ISNDLKFDAERDLKDIDAPYIPVLALNKVSSREISDRAGKYIYFPPGIFIKYGDTATSEG 202
Query: 189 VVFATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFDE---------------CH 323
V+FATYS+LIGE+ + ++R+R+KQ+L WC DFDGV+ F C
Sbjct: 203 VLFATYSALIGESQAGG-QHRTRIKQILDWCKPDFDGVVSFHSDKLLSTANCILHFGVCA 261
Query: 324 KAKNLCP----------VGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMV 473
N P + +TK G L LQN+LP+ARVVYASATGASEP+NM YM
Sbjct: 262 VVLNFTPQKIIFDECHKAKNATSTKMGKAVLNLQNQLPRARVVYASATGASEPKNMIYMS 321
Query: 474 RLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMYIXRXLSFXGXSFR 638
RLGIWGEGTPF F DF++A+ RGVGAM I AMD + MYI R LSF G SFR
Sbjct: 322 RLGIWGEGTPFRAFDDFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFR 376
>UniRef50_Q00UP9 Cluster: Nuclear helicase MOP-3/SNO; n=3;
Eukaryota|Rep: Nuclear helicase MOP-3/SNO - Ostreococcus
tauri
Length = 1207
Score = 149 bits (361), Expect = 9e-35
Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 1/202 (0%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
S DL DAERDL D+G + + + ++ + ++GV+F TYS+L+ +T
Sbjct: 188 SGDLHRDAERDLGDLGCTIKVINSCPEIDRETRAFGLSKDYQEGVLFTTYSTLVSKTQKK 247
Query: 237 NTKYRSRLKQLLQWCG-EDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
N RL+Q+++W G E+ DGV++FDECHKAKN + +K + Q++ P A
Sbjct: 248 N-----RLEQIIEWFGGENADGVVIFDECHKAKNFS-AAADTGSKVASAVITFQDRCPLA 301
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATG SE NM Y+ RLG WG+GTPF + FI ++ RGVG + + AM+
Sbjct: 302 RVVYASATGISEVGNMTYLSRLGFWGKGTPFKSADRFIESMKSRGVGFLEMLAMEMKASG 361
Query: 594 MYIXRXLSFXGXSFRXXXVPXS 659
Y+ R LSF F + S
Sbjct: 362 KYVSRGLSFRQAEFEQHTIKLS 383
>UniRef50_A4RV70 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1487
Score = 140 bits (339), Expect = 4e-32
Identities = 95/231 (41%), Positives = 120/231 (51%), Gaps = 15/231 (6%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAG-KIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETA- 230
S DL+YDAERDL D+ A K+EV P N + ++ ++ GVVF+TYS L TA
Sbjct: 189 SADLRYDAERDLNDLNAKPKVEVIPKNTAAMPR--GDLSEHLDSGVVFSTYSLLTQGTAK 246
Query: 231 ------SNNTKY------RSRLKQLLQWCGEDFDG-VIVFDECHKAKNLCPVGSGKATKT 371
SNN + SRL+Q + W ED G +IVFDECHKAKNL G GK TKT
Sbjct: 247 VKKDKYSNNDEILKMITKNSRLEQFVTWLKEDERGPLIVFDECHKAKNLYNSG-GKPTKT 305
Query: 372 GLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGV 551
L + LQ +P ARV+Y SATGASEPRN+ YM RLG +G F D + + G+
Sbjct: 306 ALCVVALQLAIPDARVLYCSATGASEPRNLGYMTRLGHFGWADTF----DMLQKLESAGL 361
Query: 552 GAMXIXAMDXXLXXMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWV 704
GA+ + A Y+ R LS+ F P S WV
Sbjct: 362 GALEMFACGLKATGSYLCRTLSYEQAEFELVDCPISEELKMMYNRSTELWV 412
>UniRef50_A3IYX5 Cluster: Putative uncharacterized protein; n=1;
Cyanothece sp. CCY 0110|Rep: Putative uncharacterized
protein - Cyanothece sp. CCY 0110
Length = 1385
Score = 134 bits (325), Expect = 2e-30
Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
S L DA+RD +G ++ L+ FK ++ N+ G++FATY++L TA+
Sbjct: 492 SASLLEDAKRDWTALGGKPEQIVSLSAFKQGEVI-----NITSGIIFATYATL--RTAAK 544
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCP----VGSGKATKTGLTALELQNKL 404
K SR++QL+ W G+DF GV+VFDE H N G +A+K GL LELQ KL
Sbjct: 545 RDKC-SRIEQLINWLGDDFSGVVVFDESHSMGNSTSQRTTFGIKEASKQGLAGLELQRKL 603
Query: 405 PKARVVYASATGASEPRNMAYMVRLGIW-GEGTPFPTFMDFINAVXXRGVGAMXIXAMDX 581
P+ARV+Y SATGA+ N+AY RLG+W G PF + +F+N + G+ A+ + D
Sbjct: 604 PQARVLYVSATGATVVDNLAYAERLGLWLGGQLPFLSRSEFLNQMHQGGIAALEVVCRDL 663
Query: 582 XLXXMYIXRXLSFXGXSF 635
+Y R LS+ G +
Sbjct: 664 KALGVYCSRSLSYQGVEY 681
>UniRef50_Q0LRT3 Cluster: Probably methylase/helicase; n=2;
Caulobacter sp. K31|Rep: Probably methylase/helicase -
Caulobacter sp. K31
Length = 1421
Score = 134 bits (324), Expect = 3e-30
Identities = 82/200 (41%), Positives = 109/200 (54%), Gaps = 7/200 (3%)
Frame = +3
Query: 60 ND-LKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
ND L DA RD IG ++ P + +K A A+ + +GV+F TY++L
Sbjct: 508 NDTLLEDARRDWTAIGGSATDITPQSAWKQA---DAIR--MDRGVLFTTYATLRQPARGM 562
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSG-----KATKTGLTALELQNK 401
SRL Q++ W G DFDGVI FDE H N G G KA++ G+ L LQN+
Sbjct: 563 RL---SRLDQIVGWLGADFDGVIAFDEAHAMANAAGGGQGARGPKKASQQGMAGLALQNR 619
Query: 402 LPKARVVYASATGASEPRNMAYMVRLGIW-GEGTPFPTFMDFINAVXXRGVGAMXIXAMD 578
LP ARV+Y SATGA+ P N+AY RLG+W G PF T F++AV GV M + A +
Sbjct: 620 LPNARVMYVSATGATTPENLAYAARLGLWGGPEAPFNTRDAFMDAVEKGGVAVMELIARE 679
Query: 579 XXLXXMYIXRXLSFXGXSFR 638
+YI R LSF G ++
Sbjct: 680 LKALGLYIARSLSFDGVEYQ 699
>UniRef50_Q98NX1 Cluster: Probably methylase/helicase; n=34;
Alphaproteobacteria|Rep: Probably methylase/helicase -
Rhizobium loti (Mesorhizobium loti)
Length = 1463
Score = 131 bits (317), Expect = 2e-29
Identities = 76/201 (37%), Positives = 111/201 (55%), Gaps = 8/201 (3%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
S+ L DA+RD +G ++ V PL++F + + +G++F TY++L +
Sbjct: 556 SDKLLEDAQRDWAALGTERLLVTPLSRFPQGHPVT-----LPEGILFTTYATLRSDDRGE 610
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKA-------TKTGLTALELQ 395
SR++Q+++W G DFDGV++FDE H +N G GK ++ G L LQ
Sbjct: 611 KV---SRVRQIVEWLGSDFDGVLIFDEAHAMQN---AGGGKGERGDVAPSQQGRAGLRLQ 664
Query: 396 NKLPKARVVYASATGASEPRNMAYMVRLGIWG-EGTPFPTFMDFINAVXXRGVGAMXIXA 572
+ LP ARVVY SATGA+ N+AY RLG+WG E PF T +F+ A+ GV AM + A
Sbjct: 665 HALPGARVVYVSATGATTVANLAYAQRLGLWGSEDFPFSTRAEFVEAIEAGGVAAMEVLA 724
Query: 573 MDXXLXXMYIXRXLSFXGXSF 635
D +Y R LSF G +
Sbjct: 725 RDLRALGLYTARSLSFDGVEY 745
>UniRef50_Q8YL46 Cluster: Alr7089 protein; n=9; Bacteria|Rep: Alr7089
protein - Anabaena sp. (strain PCC 7120)
Length = 1459
Score = 130 bits (315), Expect = 3e-29
Identities = 75/198 (37%), Positives = 112/198 (56%), Gaps = 5/198 (2%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
S+ L DA RD +G + ++ L+ K + + +G++F TYS+L +
Sbjct: 560 SSALIEDARRDWCALGGSEKDIIDLSNIK---LGDPIP--FTEGILFCTYSTL---RSQK 611
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCP----VGSGKATKTGLTALELQNKL 404
N K SRLKQ+++W G+DF+G I FDECH N +G A++ G+ L LQN L
Sbjct: 612 NGK--SRLKQIVEWAGKDFEGAISFDECHSMGNAMAQEGTLGLVSASQQGIVGLRLQNAL 669
Query: 405 PKARVVYASATGASEPRNMAYMVRLGIWGEGT-PFPTFMDFINAVXXRGVGAMXIXAMDX 581
P+ARVVY SATGA++ N++Y RLG+W G PF + DF+ ++ G+ AM + A D
Sbjct: 670 PRARVVYVSATGATKVSNLSYANRLGLWQTGDFPFTSREDFVESIEVGGIAAMEVVARDL 729
Query: 582 XLXXMYIXRXLSFXGXSF 635
+Y+ R LSF G +
Sbjct: 730 KALGLYLARSLSFDGVEY 747
>UniRef50_Q0FH07 Cluster: Putative methylase/helicase; n=1;
Roseovarius sp. HTCC2601|Rep: Putative methylase/helicase
- Roseovarius sp. HTCC2601
Length = 1127
Score = 130 bits (315), Expect = 3e-29
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Frame = +3
Query: 75 DAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRS 254
DA RD D+G ++ PL+K+K + G+ G++F TY++L S T
Sbjct: 516 DAIRDWTDLGGSPADIQPLSKWKPDQ--GIAMGD---GILFVTYATLRSVGKSGQT---- 566
Query: 255 RLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKT---GLTALELQNKLPKARVVY 425
RL+Q+L W GE FDGV+ FDE H +N G+ K GL L LQ P+ARV Y
Sbjct: 567 RLEQVLDWMGEAFDGVLAFDEAHAMQNAAGSDEGRGVKPSQQGLAGLRLQLAAPRARVFY 626
Query: 426 ASATGASEPRNMAYMVRLGIWGEGT--PFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMY 599
SATGA+ N+AY RLG+WG G PFP+ F+ A+ GV AM + A D Y
Sbjct: 627 VSATGATNVSNLAYASRLGLWGPGAEYPFPSRESFVAAMEAGGVAAMEVVARDLKTLGFY 686
Query: 600 IXRXLSFXGXSF 635
R LSF G +
Sbjct: 687 TARALSFDGVEY 698
>UniRef50_A3VJ09 Cluster: Probably methylase/helicase; n=7; cellular
organisms|Rep: Probably methylase/helicase -
Rhodobacterales bacterium HTCC2654
Length = 1465
Score = 130 bits (314), Expect = 4e-29
Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 5/198 (2%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
S+ L DA RD +G + ++ PL+KF+ + + +G++F TY++L +A
Sbjct: 552 SDKLIEDARRDWMALGGRESDIVPLSKFRQGS-----DIRLPEGILFVTYATL--RSAER 604
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPV----GSGKATKTGLTALELQNKL 404
+ K SRL Q+ W GE F+GVI FDE H N G KA++ GL L LQN +
Sbjct: 605 DGK-ASRLDQVTSWLGEGFNGVIAFDESHAMANAAGEKSDRGDKKASQQGLAGLALQNAV 663
Query: 405 PKARVVYASATGASEPRNMAYMVRLGIWGEGT-PFPTFMDFINAVXXRGVGAMXIXAMDX 581
P ARV+Y SATGA+ N+AY RLG+WG G PF T +F+ A+ G+ AM + + D
Sbjct: 664 PDARVLYVSATGATVVGNLAYASRLGLWGTGDFPFVTRAEFVAAMEAGGIAAMEMISRDL 723
Query: 582 XLXXMYIXRXLSFXGXSF 635
+Y+ R LS+ G +
Sbjct: 724 KALGLYLARSLSYAGVEY 741
>UniRef50_Q8KW06 Cluster: RC184; n=18; Rhodobacterales|Rep: RC184 -
Ruegeria sp. PR1b
Length = 819
Score = 128 bits (310), Expect = 1e-28
Identities = 74/192 (38%), Positives = 102/192 (53%), Gaps = 5/192 (2%)
Frame = +3
Query: 75 DAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRS 254
DA RD D+G ++ L+K+K + V+G ++F TY++L T
Sbjct: 535 DAIRDWTDLGGSPADIRSLSKWKPDQPIPMVDG-----ILFVTYATLRSAGKCGTT---- 585
Query: 255 RLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKT---GLTALELQNKLPKARVVY 425
RL Q+L W GEDF+GV+ FDE H +N + K GL L LQ P+ARV Y
Sbjct: 586 RLSQILDWMGEDFEGVLAFDEAHAMQNAAGSEQSRGVKPSQQGLAGLRLQLAAPRARVFY 645
Query: 426 ASATGASEPRNMAYMVRLGIWGEGT--PFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMY 599
SATGA+ N+AY RLG+WG+G PFP+ F++A+ GV AM + A D +Y
Sbjct: 646 ISATGATSVHNLAYAARLGLWGQGPEYPFPSREGFVSAMEAGGVAAMEVVARDLKTLGLY 705
Query: 600 IXRXLSFXGXSF 635
R LSF G +
Sbjct: 706 TARALSFDGVEY 717
>UniRef50_A3IS38 Cluster: Probably methylase/helicase; n=1; Cyanothece
sp. CCY 0110|Rep: Probably methylase/helicase -
Cyanothece sp. CCY 0110
Length = 1481
Score = 126 bits (304), Expect = 7e-28
Identities = 75/198 (37%), Positives = 108/198 (54%), Gaps = 5/198 (2%)
Frame = +3
Query: 57 SNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASN 236
SN L DA RD + +G +V PL+KFK V + +G++F TY++L +N
Sbjct: 560 SNALLEDARRDWKALGGDPAQVVPLSKFKQG--DPVV---LNEGILFLTYATLRSPAKAN 614
Query: 237 NTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPV----GSGKATKTGLTALELQNKL 404
SR++Q+++W GED D VIVFDE H N G A++ GL L LQ L
Sbjct: 615 KC---SRVEQIIEWLGEDSDNVIVFDESHAMANAVAEYGERGLKAASQQGLAGLRLQRVL 671
Query: 405 PKARVVYASATGASEPRNMAYMVRLGIW-GEGTPFPTFMDFINAVXXRGVGAMXIXAMDX 581
AR V+ SATGAS+ N++Y+ RLG+W E PF DF++ V G+ A+ + A D
Sbjct: 672 ANARFVFVSATGASKLENLSYLERLGLWNSEILPFINREDFLSQVAEGGIAALEVVARDL 731
Query: 582 XLXXMYIXRXLSFXGXSF 635
+Y+ R +SF G +
Sbjct: 732 KAMGLYLARSVSFDGVEY 749
>UniRef50_Q1GW10 Cluster: Putative methylase/helicase; n=6;
Sphingomonadales|Rep: Putative methylase/helicase -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 824
Score = 124 bits (299), Expect = 3e-27
Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 4/191 (2%)
Frame = +3
Query: 75 DAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRS 254
DA RD +G I++ L +K + ++ G++F TY +L + +
Sbjct: 514 DARRDWAALGGLPIDIQALASWKLGTPIA-----MRDGILFVTYPTL-----RSGRSDAT 563
Query: 255 RLKQLLQWCGEDFDGVIVFDECHKAKNLC----PVGSGKATKTGLTALELQNKLPKARVV 422
RL Q+L W GE+F+GVIVFDE H N G K ++ G+ + LQN LP+ARV+
Sbjct: 564 RLDQILAWAGEEFNGVIVFDEAHAMANAAGGEGSRGKVKGSEQGIAGVRLQNLLPRARVL 623
Query: 423 YASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMYI 602
YASATGAS+ N+AY RLG+WG T F F+ + G+ AM + A D +Y
Sbjct: 624 YASATGASDVNNLAYATRLGLWGPETAFANREAFVTDIRDGGIAAMELVARDLKSLGLYT 683
Query: 603 XRXLSFXGXSF 635
R LSF G +
Sbjct: 684 ARALSFAGVEY 694
>UniRef50_O85862 Cluster: Probably methylase/helicase; n=12;
Sphingomonadales|Rep: Probably methylase/helicase -
Sphingomonas aromaticivorans
Length = 1425
Score = 123 bits (297), Expect = 5e-27
Identities = 69/191 (36%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Frame = +3
Query: 75 DAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETASNNTKYRS 254
DA+RD IG ++ L ++K + +A +G++F Y +L + +
Sbjct: 523 DAQRDWTAIGGLPSDIIDLARWKIGEEITA-----PEGILFVPYGTLRSARVED-----T 572
Query: 255 RLKQLLQWCGEDFDGVIVFDECHKAKNLC----PVGSGKATKTGLTALELQNKLPKARVV 422
RL Q+++W F+GVIVFDE H+ + +G + + G+ + LQN LP+ARV+
Sbjct: 573 RLDQIVRWASPAFEGVIVFDEAHEMGGVAGGEGALGQKQGSLQGIAGVLLQNTLPRARVL 632
Query: 423 YASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXXMYI 602
YASATGAS+ N+AY VRLG+WG GT F FI+ + G+ AM + A D +Y+
Sbjct: 633 YASATGASDVNNLAYAVRLGLWGPGTAFANREQFISEIRDGGIAAMELVARDLKASGLYL 692
Query: 603 XRXLSFXGXSF 635
R LSF G +
Sbjct: 693 ARALSFAGIEY 703
>UniRef50_A7RYE6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 339
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3
Query: 402 LPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXI 566
LP ARVVY SATG ++ +NMA+M RLG+WGEGT F +F F+ ++ RG+G I
Sbjct: 2 LPLARVVYCSATGVTDVKNMAFMERLGLWGEGTAFKSFESFLESITKRGLGTKEI 56
>UniRef50_Q5WDB0 Cluster: Levanase; n=1; Bacillus clausii
KSM-K16|Rep: Levanase - Bacillus clausii (strain
KSM-K16)
Length = 582
Score = 33.9 bits (74), Expect = 5.3
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 261 KQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATG 440
+++++W D D V + DE + + VG G A + A E +N+L K VY++ G
Sbjct: 524 EEVIEWGSSDEDIVTIIDETERGVMIAAVGQGSAE---VVAREQKNRLEKRIRVYSTGEG 580
>UniRef50_Q4A375 Cluster: Putative uncharacterized protein; n=1;
Emiliania huxleyi virus 86|Rep: Putative uncharacterized
protein - Emiliania huxleyi virus 86
Length = 867
Score = 33.1 bits (72), Expect = 9.2
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +3
Query: 246 YRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVY 425
Y S + +L++W I DE H KN+ +++ A + + AR +Y
Sbjct: 181 YGSHVNRLVEWMEPHHTQAIFHDESHHLKNM-------NSQSAAAASIMMDMFRHARFMY 233
Query: 426 ASATGASEPRNMAYM-VRLGIW 488
+S T AS +++ + +R G+W
Sbjct: 234 SSGTCASTVKDLYLVGIRTGLW 255
>UniRef50_A1W696 Cluster: Helicase domain protein; n=3;
Betaproteobacteria|Rep: Helicase domain protein -
Acidovorax sp. (strain JS42)
Length = 1642
Score = 33.1 bits (72), Expect = 9.2
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Frame = +3
Query: 147 AKISSAVNGNVKKGVVFATYSSLIGETASNNTKYR-SRLKQLLQWCGEDFDG-VIVFDEC 320
++ + ++GN ++GVVFAT + + A +T R + ++L Q + FD F E
Sbjct: 1042 SRYTMQLHGNAQRGVVFATATPVANTMAEIHTMQRYLQPRRLAQLGLQQFDAWAATFGES 1101
Query: 321 HKAKNLCPVGSGKATKT 371
A + P GSG T
Sbjct: 1102 VTALEIAPDGSGYRVHT 1118
>UniRef50_A0DVH9 Cluster: Chromosome undetermined scaffold_66, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_66,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 808
Score = 33.1 bits (72), Expect = 9.2
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGK-IEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLI 218
V NDLKY+A+R L ++G K I+++P F + + +F Y + I
Sbjct: 321 VKNDLKYNAQRQLPNVGLSKFIQIHPYANFISLNTIKTLPDQTLQSQIFYQYKTQI 376
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,617,962
Number of Sequences: 1657284
Number of extensions: 7707851
Number of successful extensions: 26887
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 25999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26821
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75833093035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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