BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_J03 (858 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC133704-1|AAI33705.1| 1393|Homo sapiens strawberry notch homolo... 317 3e-86 BC030544-1|AAH30544.1| 791|Homo sapiens SBNO1 protein protein. 317 3e-86 AY364255-1|AAQ76814.1| 696|Homo sapiens MOP3 protein. 317 3e-86 AK001695-1|BAA91842.1| 782|Homo sapiens protein ( Homo sapiens ... 317 3e-86 AB014772-1|BAB19784.1| 1392|Homo sapiens MOP-3 protein. 317 3e-86 AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. 241 3e-63 AB023180-1|BAA76807.2| 1391|Homo sapiens KIAA0963 protein protein. 241 3e-63 AC005390-2|AAC28919.1| 1384|Homo sapiens R31180_1 protein. 229 7e-60 DQ524076-1|ABI35588.1| 126|Homo sapiens immunoglobulin heavy ch... 33 1.0 AM279567-1|CAK50686.1| 110|Homo sapiens immunoglobulin A heavy ... 32 2.3 AB063831-1|BAC01459.1| 124|Homo sapiens immunoglobulin heavy ch... 31 4.1 EF178076-1|ABM67231.1| 130|Homo sapiens immunoglobulin heavy ch... 30 9.4 AY781866-1|AAW29168.1| 136|Homo sapiens AF1 non-allergic IgE he... 30 9.4 AY393010-1|AAS85948.1| 174|Homo sapiens immunoglobulin heavy ch... 30 9.4 >BC133704-1|AAI33705.1| 1393|Homo sapiens strawberry notch homolog 1 (Drosophila) protein. Length = 1393 Score = 317 bits (779), Expect = 3e-86 Identities = 158/219 (72%), Positives = 168/219 (76%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S Sbjct: 351 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 410 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA Sbjct: 411 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 469 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L Sbjct: 470 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 529 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +F+ V S + WV A Sbjct: 530 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 568 >BC030544-1|AAH30544.1| 791|Homo sapiens SBNO1 protein protein. Length = 791 Score = 317 bits (779), Expect = 3e-86 Identities = 158/219 (72%), Positives = 168/219 (76%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S Sbjct: 349 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 408 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA Sbjct: 409 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 467 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L Sbjct: 468 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 527 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +F+ V S + WV A Sbjct: 528 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 566 >AY364255-1|AAQ76814.1| 696|Homo sapiens MOP3 protein. Length = 696 Score = 317 bits (779), Expect = 3e-86 Identities = 158/219 (72%), Positives = 168/219 (76%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S Sbjct: 314 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 373 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA Sbjct: 374 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 432 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L Sbjct: 433 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 492 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +F+ V S + WV A Sbjct: 493 MYIARQLSFTGVTFKIEEVLLSQSYAKMYNKAVKLWVIA 531 >AK001695-1|BAA91842.1| 782|Homo sapiens protein ( Homo sapiens cDNA FLJ10833 fis, clone NT2RP4001206, moderately similar to Drosophila melanogaster strawberry notch mRNA. ). Length = 782 Score = 317 bits (779), Expect = 3e-86 Identities = 158/219 (72%), Positives = 168/219 (76%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S Sbjct: 350 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 409 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA Sbjct: 410 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 468 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L Sbjct: 469 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 528 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +F+ V S + WV A Sbjct: 529 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 567 >AB014772-1|BAB19784.1| 1392|Homo sapiens MOP-3 protein. Length = 1392 Score = 317 bits (779), Expect = 3e-86 Identities = 158/219 (72%), Positives = 168/219 (76%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDIGA I V+ LNKFKY KISS NG+VKKGV+FATYSSLIGE+ S Sbjct: 350 VSNDLKYDAERDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQS 409 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 KY++RLKQLL WCG+DFDGVIVFDECHKAKNLCPVGS K TKTGL LELQNKLPKA Sbjct: 410 GG-KYKTRLKQLLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKA 468 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNMAYM RLGIWGEGTPF F DFI AV RGVGAM I AMD L Sbjct: 469 RVVYASATGASEPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRG 528 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +F+ V S + WV A Sbjct: 529 MYIARQLSFTGVTFKIEEVLLSQSYVKMYNKAVKLWVIA 567 >AK074102-1|BAB84928.1| 1269|Homo sapiens FLJ00173 protein protein. Length = 1269 Score = 241 bits (589), Expect = 3e-63 Identities = 126/219 (57%), Positives = 151/219 (68%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDI A I V+ L+K KY +++ +GV+FATYS+LIGE+ + Sbjct: 207 VSNDLKYDAERDLRDIEATGIAVHALSKIKYGDTTTS------EGVLFATYSALIGESQA 260 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 ++R+RL+Q+L WCGE F+GVIVFDECHKAKN GS TK G L+LQNKLP A Sbjct: 261 GG-QHRTRLRQILDWCGEAFEGVIVFDECHKAKN---AGS---TKMGKAVLDLQNKLPLA 313 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNM YM RLGIWGEGTPF F +F++A+ RGVGAM I AMD + Sbjct: 314 RVVYASATGASEPRNMIYMSRLGIWGEGTPFRNFEEFLHAIEKRGVGAMEIVAMDMKVSG 373 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +FR +P + F W A Sbjct: 374 MYIARQLSFSGVTFRIEEIPLAPAFECVYNRAALLWAEA 412 >AB023180-1|BAA76807.2| 1391|Homo sapiens KIAA0963 protein protein. Length = 1391 Score = 241 bits (589), Expect = 3e-63 Identities = 126/219 (57%), Positives = 151/219 (68%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233 VSNDLKYDAERDLRDI A I V+ L+K KY +++ +GV+FATYS+LIGE+ + Sbjct: 333 VSNDLKYDAERDLRDIEATGIAVHALSKIKYGDTTTS------EGVLFATYSALIGESQA 386 Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413 ++R+RL+Q+L WCGE F+GVIVFDECHKAKN GS TK G L+LQNKLP A Sbjct: 387 GG-QHRTRLRQILDWCGEAFEGVIVFDECHKAKN---AGS---TKMGKAVLDLQNKLPLA 439 Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593 RVVYASATGASEPRNM YM RLGIWGEGTPF F +F++A+ RGVGAM I AMD + Sbjct: 440 RVVYASATGASEPRNMIYMSRLGIWGEGTPFRNFEEFLHAIEKRGVGAMEIVAMDMKVSG 499 Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 MYI R LSF G +FR +P + F W A Sbjct: 500 MYIARQLSFSGVTFRIEEIPLAPAFECVYNRAALLWAEA 538 >AC005390-2|AAC28919.1| 1384|Homo sapiens R31180_1 protein. Length = 1384 Score = 229 bits (561), Expect = 7e-60 Identities = 126/231 (54%), Positives = 150/231 (64%), Gaps = 12/231 (5%) Frame = +3 Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFK--YAKISSAV----------NGNVKKGVVF 197 VSNDLKYDAERDLRDI A I V+ L+K K+ V + +GV+F Sbjct: 314 VSNDLKYDAERDLRDIEATGIAVHALSKVGAVLGKVGGKVGTVPCKIKYGDTTTSEGVLF 373 Query: 198 ATYSSLIGETASNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGL 377 ATYS+LIGE+ + ++R+RL+Q+L WCGE F+GVIVFDECHKAKN GS TK G Sbjct: 374 ATYSALIGESQAGG-QHRTRLRQILDWCGEAFEGVIVFDECHKAKN---AGS---TKMGK 426 Query: 378 TALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGA 557 L+LQNKLP ARVVYASATGASEPRNM YM RLGIWGEGTPF F +F++A+ RGVGA Sbjct: 427 AVLDLQNKLPLARVVYASATGASEPRNMIYMSRLGIWGEGTPFRNFEEFLHAIEKRGVGA 486 Query: 558 MXIXAMDXXLXXMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710 M I AMD + MYI R LSF G +FR +P + F W A Sbjct: 487 MEIVAMDMKVSGMYIARQLSFSGVTFRIEEIPLAPAFECVYNRAALLWAEA 537 >DQ524076-1|ABI35588.1| 126|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 126 Score = 33.5 bits (73), Expect = 1.0 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%) Frame = +3 Query: 171 GNVKKGVVFATYSSLIGETASNNTKYRSRLKQL----LQWCGEDFDGVIVFDECHKAKNL 338 G VK + ++ G++ S+N+ + ++Q L+W G + I F++ + Sbjct: 8 GLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSIWFND-YAVSVK 66 Query: 339 CPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGT 500 + T +L+L + P+ VY A S + Y + +WG+GT Sbjct: 67 SRITINPDTSKNQFSLQLNSVTPEDTAVYYCAREHSGSYRLKYYYGMDVWGQGT 120 >AM279567-1|CAK50686.1| 110|Homo sapiens immunoglobulin A heavy chain variable region protein. Length = 110 Score = 32.3 bits (70), Expect = 2.3 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +3 Query: 369 TGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGT 500 TG +EL VY ATGA +Y L +WG+GT Sbjct: 61 TGTAYMELTTLTSDDTAVYYCATGAGTAGEYSYYHGLDVWGQGT 104 >AB063831-1|BAC01459.1| 124|Homo sapiens immunoglobulin heavy chain VHDJ region protein. Length = 124 Score = 31.5 bits (68), Expect = 4.1 Identities = 21/79 (26%), Positives = 35/79 (44%) Frame = +3 Query: 264 QLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGA 443 Q L+W G + + + K + + + K+T T +EL + + VY A Sbjct: 43 QGLEWMGRIIPILGIANYAQKFQGRVTITADKSTSTAY--MELSSLRSEDTAVYYCARD- 99 Query: 444 SEPRNMAYMVRLGIWGEGT 500 PR+ +Y G WG+GT Sbjct: 100 QRPRSGSYYYYFGYWGQGT 118 >EF178076-1|ABM67231.1| 130|Homo sapiens immunoglobulin heavy chain variable region protein. Length = 130 Score = 30.3 bits (65), Expect = 9.4 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%) Frame = +3 Query: 171 GNVKKGVVFATYSSLIGETASNNTKYRSRLKQL----LQWCGEDFDGVIVFDECHKAKNL 338 G VK + ++ G++ S+N+ + ++Q L+W G + +++ + Sbjct: 12 GLVKPSQTLSLTCAISGDSVSSNSAAWNWIRQSPSRGLEWLGRTYYRSKWYND-YAVSVK 70 Query: 339 CPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGT 500 + T +L+L + P+ VY A S P Y + +WG+GT Sbjct: 71 SRITINPDTSKNQFSLQLNSVTPEDTAVYYCARVPSYPGTGYYYYGMDVWGQGT 124 >AY781866-1|AAW29168.1| 136|Homo sapiens AF1 non-allergic IgE heavy chain IGHV4-61 protein. Length = 136 Score = 30.3 bits (65), Expect = 9.4 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 5/115 (4%) Frame = +3 Query: 171 GNVKKGVVFATYSSLIGETASNNTKYRSRLKQL----LQWCGEDF-DGVIVFDECHKAKN 335 G VK + ++ G + S+ Y + ++QL L+W G + G ++ +++ Sbjct: 10 GLVKPSQTLSLTCTVSGGSVSSGGSYWNWIRQLPGKGLEWIGRTYTSGATNYNPSLESRV 69 Query: 336 LCPVGSGKATKTGLTALELQNKLPKARVVYASATGASEPRNMAYMVRLGIWGEGT 500 + + K +L+L + VY A +S P Y + +WG+GT Sbjct: 70 TISIDTSK----NQFSLKLSSVTAADTAVYYCARDSSFPGKYYYYYGMDVWGQGT 120 >AY393010-1|AAS85948.1| 174|Homo sapiens immunoglobulin heavy chain protein. Length = 174 Score = 30.3 bits (65), Expect = 9.4 Identities = 22/80 (27%), Positives = 38/80 (47%) Frame = +3 Query: 264 QLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKARVVYASATGA 443 Q L+W G G + + K + + + ++T T +EL + P VY A Sbjct: 39 QGLEWMGGILHGRPNYAQ--KFQGRVTISTDESTTT--VYMELSSLRPDDTAVYYCAR-- 92 Query: 444 SEPRNMAYMVRLGIWGEGTP 503 +PR+M ++ +WG+GTP Sbjct: 93 -DPRSMRGYYQMDVWGKGTP 111 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 66,900,858 Number of Sequences: 237096 Number of extensions: 1078285 Number of successful extensions: 3332 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3210 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3318 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10928473528 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -