Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J03
(858 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein. 321 9e-88
AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB... 321 9e-88
AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p pro... 264 8e-71
AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA... 264 8e-71
BT011345-1|AAR96137.1| 283|Drosophila melanogaster RH30337p pro... 29 8.2
AY122072-1|AAM52584.1| 586|Drosophila melanogaster AT15369p pro... 29 8.2
AE014297-50|AAF52148.1| 586|Drosophila melanogaster CG9778-PA p... 29 8.2
>U95760-1|AAB54001.1| 1547|Drosophila melanogaster Sno protein.
Length = 1547
Score = 321 bits (788), Expect = 9e-88
Identities = 154/219 (70%), Positives = 170/219 (77%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDLKYDAERDL DIGA +IEV+ LNKFKYAKISS VN N K+GV+F+TYS+LIGE+ +
Sbjct: 435 VSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALIGESNN 494
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
KYRSR +QLLQWCGEDF+G+I+FDECHKAKNLCPVGSGK TKTG T LELQ KLPKA
Sbjct: 495 KTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPKA 554
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEP+NMAYMVRLG+WG+GT F F DFI AV RGVGAM I AMD L
Sbjct: 555 RVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRG 614
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G SF+ VP S F WV A
Sbjct: 615 MYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEA 653
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 11 ENYIKGRKRAIWVS 52
ENY+KGRK+A+W+S
Sbjct: 421 ENYLKGRKKALWIS 434
>AE014298-1863|AAF48240.1| 1547|Drosophila melanogaster CG1903-PB,
isoform B protein.
Length = 1547
Score = 321 bits (788), Expect = 9e-88
Identities = 154/219 (70%), Positives = 170/219 (77%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAGKIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETAS 233
VSNDLKYDAERDL DIGA +IEV+ LNKFKYAKISS VN N K+GV+F+TYS+LIGE+ +
Sbjct: 435 VSNDLKYDAERDLSDIGATRIEVHALNKFKYAKISSDVNNNCKRGVIFSTYSALIGESNN 494
Query: 234 NNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPKA 413
KYRSR +QLLQWCGEDF+G+I+FDECHKAKNLCPVGSGK TKTG T LELQ KLPKA
Sbjct: 495 KTGKYRSRFRQLLQWCGEDFEGLIIFDECHKAKNLCPVGSGKPTKTGQTVLELQQKLPKA 554
Query: 414 RVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLXX 593
RVVYASATGASEP+NMAYMVRLG+WG+GT F F DFI AV RGVGAM I AMD L
Sbjct: 555 RVVYASATGASEPKNMAYMVRLGLWGQGTAFGNFNDFITAVERRGVGAMEIVAMDMKLRG 614
Query: 594 MYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXWVXA 710
MYI R LSF G SF+ VP S F WV A
Sbjct: 615 MYIARQLSFKGVSFKIEEVPLSKEFRKIYDQSVELWVEA 653
Score = 31.1 bits (67), Expect = 2.0
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2
Query: 11 ENYIKGRKRAIWVS 52
ENY+KGRK+A+W+S
Sbjct: 421 ENYLKGRKKALWIS 434
>AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p protein.
Length = 1436
Score = 264 bits (648), Expect = 8e-71
Identities = 129/217 (59%), Positives = 154/217 (70%), Gaps = 1/217 (0%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAG-KIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETA 230
VS+DLK+DAERDL DIGA KI V +NKFKY+ I S N N K+GV+F TY++LIGE+
Sbjct: 463 VSSDLKFDAERDLADIGAHEKIRVATINKFKYSPIDSEENENFKRGVIFCTYTALIGESM 522
Query: 231 SNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPK 410
+ N+KY++R +QL W G+ F+GVIVFDECHKAKNL + GK+TKTG T L+LQ LP
Sbjct: 523 TTNSKYKTRFRQLTNWLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQKLLPN 582
Query: 411 ARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLX 590
ARVVYASATGASEPRNMAYMVRLG+WG GT +P F +F+NAV RG+GAM I AMD L
Sbjct: 583 ARVVYASATGASEPRNMAYMVRLGLWGPGTAYPEFYEFVNAVEKRGIGAMEIVAMDMKLR 642
Query: 591 XMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXW 701
YI R LSF SFR V S F + W
Sbjct: 643 GTYIARQLSFKDVSFRIEEVNMSKEFRKSYNLSAELW 679
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2
Query: 11 ENYIKGRKRAIWVS 52
+NY+KGRKRA+WVS
Sbjct: 449 DNYLKGRKRALWVS 462
>AE014134-2538|AAF53422.1| 1801|Drosophila melanogaster CG3491-PA
protein.
Length = 1801
Score = 264 bits (648), Expect = 8e-71
Identities = 129/217 (59%), Positives = 154/217 (70%), Gaps = 1/217 (0%)
Frame = +3
Query: 54 VSNDLKYDAERDLRDIGAG-KIEVYPLNKFKYAKISSAVNGNVKKGVVFATYSSLIGETA 230
VS+DLK+DAERDL DIGA KI V +NKFKY+ I S N N K+GV+F TY++LIGE+
Sbjct: 828 VSSDLKFDAERDLADIGAHEKIRVATINKFKYSPIDSEENENFKRGVIFCTYTALIGESM 887
Query: 231 SNNTKYRSRLKQLLQWCGEDFDGVIVFDECHKAKNLCPVGSGKATKTGLTALELQNKLPK 410
+ N+KY++R +QL W G+ F+GVIVFDECHKAKNL + GK+TKTG T L+LQ LP
Sbjct: 888 TTNSKYKTRFRQLTNWLGKKFEGVIVFDECHKAKNLSLMNVGKSTKTGTTVLDLQKLLPN 947
Query: 411 ARVVYASATGASEPRNMAYMVRLGIWGEGTPFPTFMDFINAVXXRGVGAMXIXAMDXXLX 590
ARVVYASATGASEPRNMAYMVRLG+WG GT +P F +F+NAV RG+GAM I AMD L
Sbjct: 948 ARVVYASATGASEPRNMAYMVRLGLWGPGTAYPEFYEFVNAVEKRGIGAMEIVAMDMKLR 1007
Query: 591 XMYIXRXLSFXGXSFRXXXVPXSXXFXXTXXXXXXXW 701
YI R LSF SFR V S F + W
Sbjct: 1008 GTYIARQLSFKDVSFRIEEVNMSKEFRKSYNLSAELW 1044
Score = 31.5 bits (68), Expect = 1.5
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2
Query: 11 ENYIKGRKRAIWVS 52
+NY+KGRKRA+WVS
Sbjct: 814 DNYLKGRKRALWVS 827
>BT011345-1|AAR96137.1| 283|Drosophila melanogaster RH30337p
protein.
Length = 283
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 324 KAKNLCPVGSGKATKTGLTALELQNKLPKAR 416
+AKNL P+GSG+ T T + L L +K K +
Sbjct: 10 QAKNLPPLGSGQTTHTQVRMLMLPSKKQKLK 40
>AY122072-1|AAM52584.1| 586|Drosophila melanogaster AT15369p
protein.
Length = 586
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 324 KAKNLCPVGSGKATKTGLTALELQNKLPKAR 416
+AKNL P+GSG+ T T + L L +K K +
Sbjct: 313 QAKNLPPLGSGQTTHTQVRMLMLPSKKQKLK 343
>AE014297-50|AAF52148.1| 586|Drosophila melanogaster CG9778-PA
protein.
Length = 586
Score = 29.1 bits (62), Expect = 8.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 324 KAKNLCPVGSGKATKTGLTALELQNKLPKAR 416
+AKNL P+GSG+ T T + L L +K K +
Sbjct: 313 QAKNLPPLGSGQTTHTQVRMLMLPSKKQKLK 343
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,729,426
Number of Sequences: 53049
Number of extensions: 349867
Number of successful extensions: 1234
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4126982652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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