Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J02
         (875 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.                   32   3.1  
BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.         32   3.1  
BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3...    32   3.1  
BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3...    32   3.1  

>U96114-1|AAC51325.1|  870|Homo sapiens WWP2 protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -2

Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 292 HGFGQCVEQRPLVP 251
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC064531-1|AAH64531.1|  870|Homo sapiens WWP2 protein protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -2

Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 292 HGFGQCVEQRPLVP 251
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC013645-1|AAH13645.1|  870|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 870

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -2

Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 292 HGFGQCVEQRPLVP 251
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


>BC000108-1|AAH00108.1|  335|Homo sapiens WW domain containing E3
           ubiquitin protein ligase 2 protein.
          Length = 335

 Score = 31.9 bits (69), Expect = 3.1
 Identities = 23/74 (31%), Positives = 30/74 (40%)
 Frame = -2

Query: 472 VSLGPSRDTLERPRPAARAHGAIVLAVGEQRLPEAAGIPDQK*APVVVGSRHRMRMILRQ 293
           +S+ P+ +T   P PA  A G      G Q+LP AA  PD   A          R+    
Sbjct: 261 LSVTPNPNTTSLPAPATPAEGEEPSTSGTQQLPAAAQAPDALPAGWEQRELPNGRVYYVD 320

Query: 292 HGFGQCVEQRPLVP 251
           H       +RPL P
Sbjct: 321 HNTKTTTWERPLPP 334


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,089,593
Number of Sequences: 237096
Number of extensions: 2239316
Number of successful extensions: 4243
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4243
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)