Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_J01
(1038 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 40 2e-05
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 40 2e-05
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 38 1e-04
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 37 2e-04
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 25 0.72
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 22 6.7
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 8.9
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 NIRESESTVRILADLQMNWIDKRXSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L + W D WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 445 GDYALRARVSNNGSGL 492
G + V +NGS L
Sbjct: 102 GTFQTNVVVKHNGSCL 117
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 40.3 bits (90), Expect = 2e-05
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 NIRESESTVRILADLQMNWIDKRXSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L + W D WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 445 GDYALRARVSNNGSGL 492
G + V +NGS L
Sbjct: 102 GTFQTNVVVKHNGSCL 117
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 37.9 bits (84), Expect = 1e-04
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +1
Query: 271 NIRESESTVRILADLQMNWIDKRXSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTA 444
++ E + A L + W D WN E+G L ++ +LW+PDV++ N+A
Sbjct: 42 DVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFD 101
Query: 445 GDYALRARVSNNGSGL 492
G + V + GS L
Sbjct: 102 GTFQTNVVVKHGGSCL 117
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 LQMNWIDKRXSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 486
L + W D WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 487 GL 492
L
Sbjct: 116 CL 117
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 37.1 bits (82), Expect = 2e-04
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +1
Query: 313 LQMNWIDKRXSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 486
L + W D WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 487 GL 492
L
Sbjct: 116 CL 117
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 25.4 bits (53), Expect = 0.72
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 162 ATSLPLMIDSLLATYDRESP-PDSKIVVNLTLAF 260
A S P ++ L AT+D +SP D + V LTL +
Sbjct: 275 ACSTPFILAQLWATWDPQSPFIDGPVFVILTLLY 308
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 22.2 bits (45), Expect = 6.7
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2
Query: 524 ISMQLDNWPND 556
+ M LDNW ND
Sbjct: 295 VEMALDNWKND 305
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 8.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 86 GXTWXIXLPVAPSLXAIASCGRMRKRNITAPHDRLA 193
G W + P A + + G++R+R+ A RLA
Sbjct: 154 GNYWMLD-PSAEDVFIGGTTGKLRRRSTAASRSRLA 188
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,077
Number of Sequences: 336
Number of extensions: 2866
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 29588839
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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