Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_J01
         (1038 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    32   0.86 
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321...    30   2.6  
09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715           30   3.5  
09_02_0224 - 5984128-5984923,5985667-5986718,5986800-5987776,598...    29   8.0  

>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 31.9 bits (69), Expect = 0.86
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 411 VRPPQAFRGHQPSAAAPFPCVPTXSFVDPIHLKICQYPHGGL----GLTNVSMPQMP 253
           ++PP     H   + AP P +P+ S   P++  +   PH       G +N  MPQMP
Sbjct: 551 LQPPAHMLPHAQGSRAPLPQLPSMSGPPPVNPPLPPMPHPMAMQVQGSSNQMMPQMP 607


>11_06_0411 -
           23230580-23230795,23231407-23231862,23232142-23232195,
           23232251-23232367
          Length = 280

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = +3

Query: 282 VRVHRADTGRSSNELDRQTXELERRGMGLQHLAGVLGTL 398
           V+ H  +  R S EL+RQ  ELER+G  L+   G L  +
Sbjct: 89  VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127


>09_02_0426 + 9176147-9176297,9177118-9177624,9177985-9178715
          Length = 462

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 23/72 (31%), Positives = 32/72 (44%)
 Frame = +3

Query: 246 LTLAFEAC*HS*VRVHRADTGRSSNELDRQTXELERRGMGLQHLAGVLGTLVEA*RGTAK 425
           L++  E C +  V V + D  RS   L   T + ++ G    H A  L T +E   G   
Sbjct: 52  LSVLLEKCKNVEVNVQQEDQQRSIPLLLYLTSQSDKNGSTPLHFAASLKTSIE---GFTS 108

Query: 426 RGCNHRRGLRSP 461
           R C H R  +SP
Sbjct: 109 RLCEHFRPKQSP 120


>09_02_0224 -
           5984128-5984923,5985667-5986718,5986800-5987776,
           5988427-5989228,5990966-5991016,5992391-5993464,
           5994458-5994706
          Length = 1666

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
 Frame = -1

Query: 375 SAAAPFPCVPTXS-FVDPIHLKICQYPHGGLGLTNVSMPQM-------PGSG*LRFWSRG 220
           S   P P +P  S     +  ++ +Y HG L + N S+PQ        PGS  + F   G
Sbjct: 575 SGIEPLPLLPACSPSFSSVVDEVFEYEHGALAVPNHSLPQTTLQSTSHPGSLSVGFQGVG 634

Query: 219 ETPDRTLRGAS 187
              + ++ GAS
Sbjct: 635 TRANASIEGAS 645


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,009,041
Number of Sequences: 37544
Number of extensions: 443377
Number of successful extensions: 1194
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3059425352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)