Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I24
(936 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 36 0.047
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 36 0.062
SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 34 0.19
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 32 0.58
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 32 0.77
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 31 1.0
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 31 1.8
SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17) 29 4.1
SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 29 4.1
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_39444| Best HMM Match : SAC3_GANP (HMM E-Value=0.68) 29 7.1
SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 35.9 bits (79), Expect = 0.047
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Frame = +2
Query: 134 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLSWNAG 298
L TY+++ P D + V L L L ++ + T+ ++ ++ D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 299 EW-GCSTWLVSSERLWRPDVVL 361
+ G ++ + RLW PD+ L
Sbjct: 80 AYDGVDNIVIKASRLWLPDITL 101
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 35.5 bits (78), Expect = 0.062
Identities = 16/32 (50%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = +2
Query: 269 IDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
++ LSWNA E+G +T V +RLW PD+VL
Sbjct: 80 VNPSLSWNASEFGGVNTLHVEPDRLWVPDIVL 111
>SB_40834| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1299
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
QR RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1077 QRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKR 1136
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1137 QRRRKRKRRRKRQRRRKRQRRRK 1159
Score = 34.3 bits (75), Expect = 0.14
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK+Q R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1143 KRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1202
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1203 KRRRKRKRRRKRKRRRKRKRRRK 1225
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1035 KRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKR 1094
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1095 KRRRKRKRRRKRKRRRKRKRRRK 1117
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1065 KRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKR 1124
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1125 KRRRKRKRRRKRQRRRKRKRRRK 1147
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK+Q R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1071 KRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKR 1130
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K++ K+ + ++ K
Sbjct: 1131 KRRRKRQRRRKRKRRRKRQRRRK 1153
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1095 KRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKR 1154
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1155 QRRRKRKRRRKRKRRRKRKRRRK 1177
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK+Q R+K+K+ +R + K+ + K+ + + R R + +
Sbjct: 1113 KRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKR 1172
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1173 KRRRKRKRRRKRKRRRKRKRRRK 1195
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK+Q R+K+++ +R + K+ K K+ + + R R + +
Sbjct: 1131 KRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1190
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1191 KRRRKRKRRRKRKRRRKRKRRRK 1213
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/83 (19%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
QR RK++ R+K+++ +R + K+ K K+ + + R R + +
Sbjct: 1137 QRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1196
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1197 KRRRKRKRRRKRKRRRKRKRRRK 1219
Score = 32.7 bits (71), Expect = 0.44
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
QR RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1155 QRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1214
Query: 648 XXKQKKKTIXKK 613
++K+K K+
Sbjct: 1215 KRRRKRKRRRKR 1226
Score = 31.9 bits (69), Expect = 0.77
Identities = 14/72 (19%), Positives = 34/72 (47%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1161 KRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1220
Query: 648 XXKQKKKTIXKK 613
++K+K++ +
Sbjct: 1221 KRRRKRKSLMSR 1232
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ + K+ + + R R + +
Sbjct: 1041 KRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKR 1100
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1101 KRRRKRKRRRKRKRRRKRQRRRK 1123
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + ++ K K+ + + R R + +
Sbjct: 1047 KRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1106
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1107 KRRRKRKRRRKRQRRRKRKRRRK 1129
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + K+ K K+ + + R R + +
Sbjct: 1053 KRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1112
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K++ K+ + ++ K
Sbjct: 1113 KRRRKRQRRRKRKRRRKRKRRRK 1135
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+++ +R + K+ K K+ + + R R + +
Sbjct: 1059 KRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1118
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1119 QRRRKRKRRRKRKRRRKRQRRRK 1141
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + ++ K K+ + + R R + +
Sbjct: 1107 KRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKR 1166
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1167 KRRRKRKRRRKRKRRRKRKRRRK 1189
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/83 (18%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + ++ K K+ + + R R + +
Sbjct: 1125 KRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKRKRRRKR 1184
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1185 KRRRKRKRRRKRKRRRKRKRRRK 1207
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/80 (18%), Positives = 35/80 (43%)
Frame = -1
Query: 819 RKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXKXXK 640
RK++ R+K+K+ +R + K+ K K+ + + R R + + +
Sbjct: 1032 RKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRR 1091
Query: 639 QKKKTIXKKXXKXXXXKKXK 580
+K+K K+ + ++ K
Sbjct: 1092 RKRKRRRKRKRRRKRKRRRK 1111
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/83 (20%), Positives = 36/83 (43%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ KR +K + +K K K + R + K
Sbjct: 1083 KRRRKRKRRRKRKRRRKRKR-RRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRK 1141
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
+++K+ +K + K+ +
Sbjct: 1142 RKRRRKRQRRRKRQRRRKRKRRR 1164
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/83 (16%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+K+ +R + ++ K K+ + + R R + +
Sbjct: 1089 KRRRKRKRRRKRKRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKR 1148
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K++ K+ + ++ K
Sbjct: 1149 QRRRKRQRRRKRKRRRKRKRRRK 1171
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/83 (16%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R RK++ R+K+++ +R + K+ + K+ + + R R + +
Sbjct: 1101 KRRRKRKRRRKRKRRRKRQRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKR 1160
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1161 KRRRKRKRRRKRKRRRKRKRRRK 1183
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/83 (16%), Positives = 37/83 (44%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
QR RK++ R+K+++ +R + ++ + K+ + + R R + +
Sbjct: 1119 QRRRKRKRRRKRKRRRKRQRRRKRKRRRKRQRRRKRQRRRKRKRRRKRKRRRKRKRRRKR 1178
Query: 648 XXKQKKKTIXKKXXKXXXXKKXK 580
++K+K K+ + ++ K
Sbjct: 1179 KRRRKRKRRRKRKRRRKRKRRRK 1201
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 33.9 bits (74), Expect = 0.19
Identities = 19/86 (22%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
+++ L Y +++ P D + + L + LR ++ E E + ++ D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVL 361
WN ++ G + +++ +++W+PDV+L
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLL 538
Score = 33.1 bits (72), Expect = 0.33
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
++ LL Y +++ P + + + L + LR ++ E + + I ++ D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 287 WNAGEWG-CSTWLVSSERLWRPDVVL 361
WN ++G + ++ +R+W+PDV+L
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLL 120
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 32.3 bits (70), Expect = 0.58
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 281 LSWNAGEWG-CSTWLVSSERLWRPDVVL 361
LSWNA E+G S VS +R W PD++L
Sbjct: 30 LSWNASEYGGVSQIYVSPKRPWTPDILL 57
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 31.9 bits (69), Expect = 0.77
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 188 LTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLL 364
LTL+ H ++E ++ L+ D RL+WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 31.5 bits (68), Expect = 1.0
Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +2
Query: 98 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 262
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 263 NXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
N + L WNA E+G L +S +W PD+VL
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVL 120
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 281 LSWNAGEW-GCSTWLVSSERLWRPDVVL 361
LSWNA E+ G S + ++LW+PD+ L
Sbjct: 124 LSWNASEYGGISQVNLEPDQLWKPDIYL 151
>SB_36647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 30.3 bits (65), Expect = 2.3
Identities = 15/67 (22%), Positives = 31/67 (46%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+R +KKQ +KK++K K E ++ + E ++ K + R R + K
Sbjct: 4 KRKKKKQKKKKKKRKKKKQKKQKKKKEEEEEEEEENEEEERRRKRRRRRRRRRRRRKKEK 63
Query: 648 XXKQKKK 628
K++++
Sbjct: 64 KKKEEEE 70
>SB_27310| Best HMM Match : CUB (HMM E-Value=9.7e-17)
Length = 761
Score = 29.5 bits (63), Expect = 4.1
Identities = 23/90 (25%), Positives = 29/90 (32%)
Frame = +2
Query: 581 FXFXFXXXFXXFXXIVFFFCFXXFXCXXXXFLXLXXCXXXFFFXSVFXXVFFFXSXLFXL 760
F F F F F F + FL + F F F V F + F
Sbjct: 667 FSFFFAFAFRRLRLDSVVFAFVVYP---YFFLFVVFAFVVFIFIFFFAFVIFVFNAFFVF 723
Query: 761 XVXFFCFFLVXGSXXSCFFLFLCYIFSXXF 850
V F FLV S F+F ++ F
Sbjct: 724 VVFAFFVFLVFVFFVSVVFVFFVFVVYVFF 753
>SB_50227| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = -3
Query: 829 TEKQKETRXXRPXH*KETKKXNX*XKEXRXKKKXXXKNRXKKKXXXTXXKXXKXXXXTXK 650
T+K+K+ + + K+ KK K+ + KKK K + KKK + + K
Sbjct: 148 TKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEEEEEEEKEEK 207
Query: 649 XXKTEKEND 623
+ E+E +
Sbjct: 208 EEEEEEEEE 216
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +2
Query: 236 VRILADLQMNXI------DKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
++I D+ +N I D RL WN ++G +++ S +LW PD+ L
Sbjct: 264 IKIKFDIALNQIIDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITL 312
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/71 (19%), Positives = 34/71 (47%)
Frame = -1
Query: 825 RNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXKX 646
+ RK+Q + +KK+K+ K E +K + + K+ + K + ++ + +
Sbjct: 305 KERKRQEKLEQKAKKKEKERQEREKEKEREKERIQQEKEKQKERREKEKQKHQEKKEKER 364
Query: 645 XKQKKKTIXKK 613
++K+K +K
Sbjct: 365 QREKEKLEKEK 375
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 223 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 119
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_39444| Best HMM Match : SAC3_GANP (HMM E-Value=0.68)
Length = 794
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 41 YYSGYXFLLTCAIASAAECEN-ATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANI 217
YY GY L T + + C+N ATSL + +LL+ RE+ ++++ + +H+N+
Sbjct: 143 YYPGYQSLQTALVQLRSACKNVATSL---VTALLSVTGREN-----VIIDSKISTKHSNM 194
>SB_42837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.7 bits (61), Expect = 7.1
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 7/80 (8%)
Frame = -3
Query: 841 REYITEKQKETRXXRPXH*KETKKXNX*XKEXRXKKKXXXKNRXKKKXXXTXXKXXKXXX 662
REY EK+++ + + K+ KK K+ + KK KN+ KKK + +
Sbjct: 11 REYREEKKRKKKKQKKKKKKKKKKKK---KKNKKNKKNKNKNKKKKKMKKKKEEEAEVGE 67
Query: 661 XT-------XKXXKTEKEND 623
T K +TEKE D
Sbjct: 68 KTLEAENEEEKIEETEKEKD 87
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -2
Query: 746 KXEKKXXTXKQRXKKXXXNXKXXXETXXXXKXNXKNRKRKRXXK 615
+ EKK KQ+ KK K + K KN+K+K+ K
Sbjct: 14 REEKKRKKKKQKKKKKKKKKKKKKKNKKNKKNKNKNKKKKKMKK 57
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,483,831
Number of Sequences: 59808
Number of extensions: 319119
Number of successful extensions: 960
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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