Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I24
(936 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 40 1e-04
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 38 6e-04
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 37 8e-04
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 36 0.002
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 35 0.003
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 34 0.005
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 33 0.009
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 31 0.038
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 30 0.088
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 30 0.088
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 29 0.15
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 39.5 bits (88), Expect = 1e-04
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRESESTVRILADLQMNXIDKR 280
+ D LL+ Y+R P ++ V + L L N++ T + + + N D +
Sbjct: 27 LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWN--DYK 84
Query: 281 LSWNAGEWG-CSTWLVSSERLWRPDVVL 361
L WN ++G T V SE +W PD+VL
Sbjct: 85 LKWNPDDYGGVDTLHVPSEHIWLPDIVL 112
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 37.5 bits (83), Expect = 6e-04
Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Frame = +2
Query: 59 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 232
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 233 TVRILAD---LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLKXGXXH 382
+I+ ++ + D +L W E+G L V S+ +WRPD+VL H
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVLYNNADGH 123
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 37.5 bits (83), Expect = 6e-04
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +2
Query: 122 MIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESESTVRILADLQMNXIDKR 280
+ D LL+ Y+R P S ++V L L L N+++ T I L+ D +
Sbjct: 39 LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96
Query: 281 LSWNAGEWGCSTWL-VSSERLWRPDVVL 361
W+ E+G T L V SE +W PD+VL
Sbjct: 97 FKWDPAEYGGVTELYVPSEHIWLPDIVL 124
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 37.1 bits (82), Expect = 8e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +2
Query: 134 LLATYD---RESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW 304
LL YD R S + V + + H I E +ST+ + ++ + D +L+WN +
Sbjct: 46 LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105
Query: 305 G-CSTWLVSSERLWRPDVVL 361
G + +WRPDVVL
Sbjct: 106 GNLNVVRWDPTIVWRPDVVL 125
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 35.9 bits (79), Expect = 0.002
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Frame = +2
Query: 59 FLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESES 232
+LL+ + A N + L D LL+ Y++ P ++ V+ + + L+ + + +
Sbjct: 11 WLLSALVVHGAVAGNPDAKRLY-DDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNL 69
Query: 233 TVRILAD---LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
+I+ ++ + D +L W E+G L V S+ +WRPD+VL
Sbjct: 70 KNQIMTTNLWVEQSWYDYKLRWEPKEYGGVQMLHVPSDHIWRPDIVL 116
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 35.1 bits (77), Expect = 0.003
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Frame = +2
Query: 80 ASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTV 238
A + C + D LL+ Y++ P + LT+ ++ N++ T
Sbjct: 13 AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72
Query: 239 RILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
+ ++ D +L W E+G L V S+ +WRPD+VL
Sbjct: 73 NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVL 112
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 34.3 bits (75), Expect = 0.005
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
++++LLATY+ P + V L L+ ++ E + A L + D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLR 86
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVL 361
WN E+G L ++ +LW+PDV++
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLM 112
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.009
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNXIDKRLS 286
+ D LL+ Y+R P LT L L+ + + E +++ ++ D +L
Sbjct: 33 LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVL 361
W+ E+G L V SE++W PD+VL
Sbjct: 93 WDPEEYGGVEMLYVPSEQIWLPDIVL 118
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 31.5 bits (68), Expect = 0.038
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
++++LLATY+ P + V L L+ ++ E + L + D L
Sbjct: 27 LLNNLLATYNTLERPVANESDPLEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLR 86
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVL 361
WN E+G L ++ +LW+PDV++
Sbjct: 87 WNDSEYGGVRDLRITPNKLWKPDVLM 112
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 30.3 bits (65), Expect = 0.088
Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
L++ D + WN+ E+G L + RLW+PDV++
Sbjct: 59 LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLM 95
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 30.3 bits (65), Expect = 0.088
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
L++ D L WN E+G L + R+W+PDV++
Sbjct: 91 LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLM 127
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 29.5 bits (63), Expect = 0.15
Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
N+ E ++ L++ D +L W+ ++G + +++W+PD+VL
Sbjct: 65 NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVL 115
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 620,114
Number of Sequences: 2352
Number of extensions: 10136
Number of successful extensions: 34
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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