Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I24
(936 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 42 6e-04
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 40 0.002
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 40 0.002
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 40 0.002
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 39 0.004
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 38 0.010
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 37 0.018
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 37 0.018
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 37 0.018
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 37 0.018
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 37 0.018
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 37 0.024
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 37 0.024
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 36 0.055
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical pr... 34 0.13
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 34 0.13
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 34 0.13
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 33 0.22
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 33 0.29
AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical ... 33 0.29
AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical ... 33 0.29
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 33 0.39
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 33 0.39
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 33 0.39
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 32 0.51
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 32 0.51
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.51
AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine... 32 0.51
Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical p... 31 0.90
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 31 1.2
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 30 2.1
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 30 2.1
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 30 2.1
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 30 2.7
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 30 2.7
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 30 2.7
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 30 2.7
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 30 2.7
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 30 2.7
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 30 2.7
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 29 3.6
AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ... 29 3.6
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 29 4.8
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 29 4.8
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 29 4.8
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.3
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 8.3
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 28 8.3
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 44.0 bits (99), Expect = 2e-04
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANI 217
+ FLL I +S ++++LL Y++ P + V +L R ++
Sbjct: 9 HIFLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDV 68
Query: 218 RESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
E + L+M DK+L+WN +WG ++ + S+++W PD+VL
Sbjct: 69 DEVNQVLTTSLWLEMQWYDKKLTWNPTDWGGVEYIHIPSDQIWIPDIVL 117
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 146 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL- 322
YD E+P + L +L+ ++E + + ++ ++ D RLSWNA W +T +
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNASAWQNTTMIY 122
Query: 323 VSSERLWRPDV 355
+ +++W P +
Sbjct: 123 MKQDKVWSPTI 133
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 217
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 218 RESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
E + + L+ ID++LSW+ + G + V E +W PD+VL
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVL 115
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 217
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 218 RESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
E + + L+ ID++LSW+ + G + V E +W PD+VL
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVL 115
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 217
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 218 RESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
E + + L+ ID++LSW+ + G + V E +W PD+VL
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVL 115
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 39.1 bits (87), Expect = 0.004
Identities = 20/103 (19%), Positives = 42/103 (40%)
Frame = +2
Query: 83 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 262
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 263 NXIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLKXGXXHRRG 391
+ D +SW+ +WG S ++W P++V + G G
Sbjct: 114 SWNDTMVSWDKEQWGLSWLNFYWIQIWTPNIVQINGGSTSNPG 156
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 37.9 bits (84), Expect = 0.010
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
++ E + + + L + +D RLSWN E+G T + E LW PD++L
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPGEMLWLPDIIL 94
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 37.1 bits (82), Expect = 0.018
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +2
Query: 125 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNXIDKRL 283
+ + A +D P PD+ N TL +L+ + E E V ++ +L D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 284 SWNAGEWGCSTWLVS-SERLWRP 349
SWNA ++ T + + E++W P
Sbjct: 110 SWNASDYKNVTAIFTRQEKIWSP 132
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
N+ E ++ L M D +L+WN E+G S V S+R+W PD+VL
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVL 149
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.018
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
N+ E ++ L M D +L+WN E+G S V S+R+W PD+VL
Sbjct: 99 NVDEKNQILQTNVWLTMKWNDFQLAWNPAEYGNISNLHVPSDRVWLPDIVL 149
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.018
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 50 GYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-N 214
G+ ++L + S N + L D L+A Y++ P S+ +VV L L +
Sbjct: 7 GFAYILIFLLLSPPTHANRDANRLFED-LIADYNKLVRPVSENGETLVVTFKLKLSQLLD 65
Query: 215 IRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
+ E + LQ + +D +L W+ E+G V S+ +W PDVVL
Sbjct: 66 VHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVL 115
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 37.1 bits (82), Expect = 0.018
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Frame = +2
Query: 50 GYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA-N 214
G+ ++L + S N + L D L+A Y++ P S+ +VV L L +
Sbjct: 7 GFAYILIFLLLSPPTHANRDANRLFED-LIADYNKLVRPVSENGETLVVTFKLKLSQLLD 65
Query: 215 IRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
+ E + LQ + +D +L W+ E+G V S+ +W PDVVL
Sbjct: 66 VHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVL 115
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 36.7 bits (81), Expect = 0.024
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Frame = +2
Query: 35 DLYYSGYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHL 202
+ Y + F L + + E + T + D L+ YD P + +++N++++
Sbjct: 2 NFYDFKFVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNT 61
Query: 203 RHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 361
+ +E T+ ++ + D+ L WN ++ TWL E LW PD +
Sbjct: 62 MSVLTLDPAEETINFSSEFILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 36.7 bits (81), Expect = 0.024
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 364
L +N +D RLSWN W + R+W+PD++L+
Sbjct: 165 LNINWMDPRLSWNESLWSEIKAIYIPHARIWKPDIILV 202
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 35.5 bits (78), Expect = 0.055
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 161 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSER 337
PP +++ + + + L+ ++ E E V L D D+RL WN E+ G S V
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWNPLEYGGISHIYVPQRM 109
Query: 338 LWRPDVVL 361
+W P+V +
Sbjct: 110 IWLPEVTI 117
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 35.1 bits (77), Expect = 0.073
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 188 LTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRP 349
L +L+ ++E E V ++ +L D RLSWN+ + T V E++W P
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNSSLYSNIPTVFVRQEKVWSP 133
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 50 GYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP-----DSKIVVNLTLHL-RHA 211
G+ L ++ + + CE+ + ++ L Y+ P + ++V + + L
Sbjct: 17 GFLVFLAVSLRNHSTCEDIDAEDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLI 76
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
N+ E E + L M D +L W+ ++ T + V+ E++W PD+VL
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVL 127
>Z50029-2|CAA90341.3| 537|Caenorhabditis elegans Hypothetical
protein ZC504.2 protein.
Length = 537
Score = 34.3 bits (75), Expect = 0.13
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
L+M D RL W+ G WG L V +++W PD++L
Sbjct: 77 LEMQWFDYRLMWDPGRWGKIRKLHVPVDQIWIPDILL 113
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 50 GYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP-----DSKIVVNLTLHL-RHA 211
G+ L ++ + + CE+ + ++ L Y+ P + ++V + + L
Sbjct: 17 GFLVFLAVSLRNHSTCEDIDAEDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLI 76
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
N+ E E + L M D +L W+ ++ T + V+ E++W PD+VL
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVL 127
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Frame = +2
Query: 50 GYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP-----DSKIVVNLTLHL-RHA 211
G+ L ++ + + CE+ + ++ L Y+ P + ++V + + L
Sbjct: 17 GFLVFLAVSLRNHSTCEDIDAEDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLI 76
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
N+ E E + L M D +L W+ ++ T + V+ E++W PD+VL
Sbjct: 77 NVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVL 127
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 33.5 bits (73), Expect = 0.22
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP--DSKIVVNLTLHL---RHANIRESESTVRILADLQMNXIDKRLS 286
++ L YD P D + VN+ L L + ++ E + ++ Q D +L
Sbjct: 28 LLKDLREGYDPVERPVADHRKPVNVKLRLILQQLVDVDERNQVITLVVWNQYTWNDYKLR 87
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVLLKXGXXH 382
W+ E+G T L + LW+PD++L H
Sbjct: 88 WSPEEYGNITTLQIPHGTLWKPDILLFNSANEH 120
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 VNLTLHLRHAN-IRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 358
VN+ L + H + E E T + + ID+ + W+A + + +S+ LW+P +
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDAKKENVTKLTISAHSLWQPALA 113
Query: 359 L 361
L
Sbjct: 114 L 114
>AC024207-2|AAL77193.1| 425|Caenorhabditis elegans Hypothetical
protein Y74E4A.1a protein.
Length = 425
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 355
L+++ D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>AC024207-1|AAL77194.1| 428|Caenorhabditis elegans Hypothetical
protein Y74E4A.1b protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.29
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 254 LQMNXIDKRLSWNAGEWGCSTW-LVSSERLWRPDV 355
L+++ D+RL WN EW L S RLW PD+
Sbjct: 107 LKLSWKDRRLRWNPEEWKTEVLRLKSMGRLWSPDI 141
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 122 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNXIDKRL 283
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 284 SWNAGEWGCSTWL-VSSERLWRPDVVL 361
+WN ++G L V SE +W+PD+++
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLV 113
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 122 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNXIDKRL 283
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 27 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 86
Query: 284 SWNAGEWGCSTWL-VSSERLWRPDVVL 361
+WN ++G L V SE +W+PD+++
Sbjct: 87 TWNPSDFGNIKSLHVPSEMIWKPDLLV 113
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 32.7 bits (71), Expect = 0.39
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Frame = +2
Query: 122 MIDSLLATYDRESPP---DSKIVVNLTLHLRHANIR---ESESTVRILADLQMNXIDKRL 283
+I L Y +E P +S N+T+ L I+ E++ + + ++ D+ L
Sbjct: 11 LIKYLFRDYHKELRPVKDESSGPTNVTVQLYFKQIQKVHENDQIITLYCWIEEYWQDEFL 70
Query: 284 SWNAGEWGCSTWL-VSSERLWRPDVVL 361
+WN ++G L V SE +W+PD+++
Sbjct: 71 TWNPSDFGNIKSLHVPSEMIWKPDLLV 97
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 32.3 bits (70), Expect = 0.51
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 188 LTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRP 349
L +L+ ++E V ++ +L D RLSWN + ST E++W P
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWNISLYSNVSTIFARQEKVWSP 133
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 32.3 bits (70), Expect = 0.51
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +2
Query: 62 LLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRES 226
+L+ I + C+ + + + + LL Y+ P + V + L L+ ++ E
Sbjct: 9 ILSLVIIHSNLCDGSVAETKLFTDLLKGYNPLERPVQNSSQPLEVKIKLFLQQILDVDEK 68
Query: 227 ESTVRILADLQMNXIDKRLSWNAGEWGCSTWLV---SSERLWRPDVVL 361
V + A L D +L W ++G + SS+ +W+PDV+L
Sbjct: 69 NQIVSVNAWLSYTWFDHKLQWEPKKYGGIQDIRFPGSSDHIWKPDVLL 116
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 182 VNLTLHLRHAN-IRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWLVSSERLWRPDVV 358
V + L++ H + E E T + L + D+ L W ST ++S +LW+P +
Sbjct: 54 VAVYLNIAHVEKVDEHEQTALVHGHLMASWTDEYLKWERKATNISTLSIASSKLWQPALQ 113
Query: 359 L 361
L
Sbjct: 114 L 114
>AC006631-5|AAF39790.3| 469|Caenorhabditis elegans Acetylcholine
receptor protein 21 protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.51
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +2
Query: 134 LLATYDRESPPD--SKIVVNLTLHLRHANIRESESTVRILAD---LQMNXIDKRLSWNAG 298
LL Y+ E P SK +N+T I + + +IL ++++ +D +L W+
Sbjct: 7 LLYDYNNEVRPSVHSKEPINVTFVFSLTQIIDVDERNQILTTNSWIRLHWVDYKLVWDPR 66
Query: 299 EWGCSTWL-VSSERLWRPDVVL 361
+ T + + S+++W+PD++L
Sbjct: 67 LYQNVTRIHIPSDKIWKPDIIL 88
>Z99281-29|CAH04731.2| 438|Caenorhabditis elegans Hypothetical
protein Y57G11C.49 protein.
Length = 438
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 6/96 (6%)
Frame = +2
Query: 92 ECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLH-LRHANIRESESTVRILADL 256
E + T + D L+ YD P + +N++++ + + +E T+ +
Sbjct: 21 EIDGITVSEQLKDVLMEGYDSSIRPVINERDTLFINISINSMSFLTLDPAEETINFSGEF 80
Query: 257 QMNXIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVL 361
+ D+ L WN ++ TWL E LW PD +
Sbjct: 81 ILQWKDEFLFWNKSDYNI-TWLKLKESFLWTPDTTV 115
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/66 (22%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +2
Query: 176 IVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL---VSSERLW 343
+VV++ ++L+ ++ E + ++A ++ D +L W+ E+G + ++ +W
Sbjct: 53 LVVSVKIYLQQILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYGGIKDIRIPGNANAIW 112
Query: 344 RPDVVL 361
+PDV+L
Sbjct: 113 KPDVLL 118
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/106 (19%), Positives = 40/106 (37%)
Frame = -1
Query: 879 NXXKKAXEXKNXXENI*QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKX 700
N +K E K + + ++K+ + KK+K + + K KTE +
Sbjct: 76 NEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEKTKTEDNEG 135
Query: 699 KXXXKXRXRNXXXXQXKXXKQKKKTIXKKXXKXXXXKKXKTXXKXE 562
K K + + K K+K + +K + +K K K +
Sbjct: 136 KNEEKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKEDPKKD 181
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 785 ERNKKXKXXXXRXKXEKKXXTXKQRXKKXXXNXKXXXETXXXXKXNXKNRKRKRXXK 615
E+ +K K + K EKK K+R +K K + + + K +K+KR K
Sbjct: 154 EQKRKEKERRKKEKREKKERKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSK 210
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = -2
Query: 785 ERNKKXKXXXXRXKXEKKXXTXKQRXKKXXXNXKXXXETXXXXKXNXKNRKRKRXXK 615
E+ +K K + K EKK K+R +K K + + + K +K+KR K
Sbjct: 154 EQKRKEKERRKKEKREKKKRKEKKRLEKENRKIKEEDDEDSDDEDDEKAKKKKRKSK 210
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 194 LHLRHAN-IRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWR 346
LH+ H + I++ + +++ +D+RL WN + G T+ + +WR
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWNPSNYSGIRTFSTTRHEMWR 114
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 176 IVVNLTLHL-RHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRP 349
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 350 DVVL 361
D+VL
Sbjct: 116 DIVL 119
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Frame = +2
Query: 98 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNXI 271
E+A L+ L I +A+ + +N L+H + E + I L+++
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 272 DKRLSWNAGEWGCSTWLVSS-ERLWRP 349
D RL WN W + +V S +W P
Sbjct: 93 DDRLMWNQDTWKKNKLVVHSFHHIWVP 119
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 200 LRHANIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
+R ++ E + L+M D +L+W ++G T + S+ +W PD+VL
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVL 126
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 176 IVVNLTLHL-RHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRP 349
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 350 DVVL 361
D+VL
Sbjct: 116 DIVL 119
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 176 IVVNLTLHL-RHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRP 349
++V + L L N+ E + + L + D ++ WN +G + VS +++W P
Sbjct: 56 LIVKMALQLVLLINVDEKDQVMHTNVWLTLQWHDFQMKWNPVNYGEIKQIRVSPDKVWLP 115
Query: 350 DVVL 361
D+VL
Sbjct: 116 DIVL 119
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 VVNLTLHLRHAN---IRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWR 346
V+N+T+ + N + E ++IL + D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 347 PD 352
PD
Sbjct: 120 PD 121
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 179 VVNLTLHLRHAN---IRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWR 346
V+N+T+ + N + E ++IL + D L+W+ EW G ++ ++W
Sbjct: 60 VLNVTVQPQIYNLVEVNEQNEQIKILLWFPQSWKDDYLTWDPKEWNGIERIIIPKSQIWI 119
Query: 347 PD 352
PD
Sbjct: 120 PD 121
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 200 LRHANIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
+R ++ E + L+M D +L+W ++G T + S+ +W PD+VL
Sbjct: 72 IRIIDVDEKNQVLTTNLWLEMKWNDAKLTWTPEKYGGLKTLHIPSDFIWTPDLVL 126
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 29.9 bits (64), Expect = 2.7
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = -2
Query: 869 KKQXRXKTXXRIYNRETERNKXKXTXTLERN-KKXKXXXXRXKXEKKXXTXKQRXKKXXX 693
KK+ K ++ +E +++K K E+ KK K +KK K + K
Sbjct: 175 KKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKDKKDK 234
Query: 692 NXKXXXETXXXXKXNXKNRKRK 627
K + K + KN+K +
Sbjct: 235 KDKKDKKEKKDDKKSKKNKKEE 256
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/87 (25%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +2
Query: 146 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWL 322
YD ++P + L L+ + E V ++ ++ D RLSWNA + T+
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNASLYDDIDTFY 122
Query: 323 VSSERLWRPDVVLLKXGXXHRRGLRSP 403
+W P L G LR P
Sbjct: 123 TRQSNVWSP--TLSAFGADELVDLRDP 147
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/95 (21%), Positives = 36/95 (37%)
Frame = -1
Query: 870 KKAXEXKNXXENI*QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXX 691
KK E K + +++ KK+ +K +KK + + KK + + ++ K
Sbjct: 70 KKEEEKKEKSKKSEKKDDKKEEAKKEDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKED 129
Query: 690 XKXRXRNXXXXQXKXXKQKKKTIXKKXXKXXXXKK 586
K + + + K K KK K KK
Sbjct: 130 EKEKGDDKKEDEKDDKKSGSKDAEKKEEKKEEEKK 164
>AF047656-8|AAC05109.2| 340|Caenorhabditis elegans Ligand-gated ion
channel protein 5 protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.6
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +2
Query: 143 TYD-RESPPDSKIVVNLTLH-LRHANIRESESTVRILADLQMNXIDKRLSWNAGEWGCST 316
TYD P D+ V +T + ++ +++ T+ + + D L WN + +
Sbjct: 39 TYDVNVKPSDTLTTVTITPNTFLLLSMDQTQETILFSQEFLLKWYDPILHWNRTLFDYNR 98
Query: 317 -WL-VSSERLWRPDVVLLK 367
W+ +S R+W PDV+ K
Sbjct: 99 EWIKISVSRVWVPDVIFTK 117
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW- 304
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 305 GCSTWLVSSERLWRPDVVL 361
G T V +++W PD+VL
Sbjct: 97 GIKTIRVPPDKVWLPDIVL 115
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 DSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW- 304
+SL+ S P ++ +L L N+ E ++ M D ++ W+ E+
Sbjct: 38 NSLIRPVLNASSPPIEVFFSLAFVLL-INVDEKNQIMQTNVWPTMKWNDYQMQWDPREFD 96
Query: 305 GCSTWLVSSERLWRPDVVL 361
G T V +++W PD+VL
Sbjct: 97 GIKTIRVPPDKVWLPDIVL 115
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/102 (23%), Positives = 36/102 (35%)
Frame = -1
Query: 867 KAXEXKNXXENI*QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXX 688
K E K + ++ KK+ D KK++K K + + + K E KK +
Sbjct: 76 KKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSE--D 133
Query: 687 KXRXRNXXXXQXKXXKQKKKTIXKKXXKXXXXKKXKTXXKXE 562
K K K+ K K K K+ K K E
Sbjct: 134 KKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEE 175
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/95 (22%), Positives = 35/95 (36%)
Frame = -1
Query: 870 KKAXEXKNXXENI*QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXX 691
+K E K+ E + KK+ + KK+ K + K K E K K
Sbjct: 116 EKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEE 175
Query: 690 XKXRXRNXXXXQXKXXKQKKKTIXKKXXKXXXXKK 586
K + + K K+++K +K + KK
Sbjct: 176 KKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKK 210
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/89 (22%), Positives = 39/89 (43%)
Frame = -1
Query: 828 QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXXXKXRXRNXXXXQXK 649
+ R+K+ +KKQK+ +R E +K + E +K K K R + + K
Sbjct: 186 EEERRKEKEKRREEKKKQKELLKEKERSE-RKEKERELEREKEKSREKEREKEREKEREK 244
Query: 648 XXKQKKKTIXKKXXKXXXXKKXKTXXKXE 562
++K++ K+ K ++ K + E
Sbjct: 245 -EREKEREKQKEREKEREKEREKEKKREE 272
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/95 (23%), Positives = 38/95 (40%)
Frame = -1
Query: 870 KKAXEXKNXXENI*QRNRKKQXXXDPXTRKKQKKXTXXXKRXEXKKXTNXKTEXKKXKXX 691
KK + +N + +KK+ D +K+K K+ + KK + + K+ K
Sbjct: 282 KKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEK----DKKKKDKKKDDDDDDDEKEKKDK 337
Query: 690 XKXRXRNXXXXQXKXXKQKKKTIXKKXXKXXXXKK 586
K ++ + K K+KKK K KK
Sbjct: 338 KKKDDKDDDEDEDKDDKKKKKDDVDDDMKKDKKKK 372
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/102 (20%), Positives = 39/102 (38%)
Frame = -3
Query: 883 DQQXXKSKXEXKXXREYITEKQKETRXXRPXH*KETKKXNX*XKEXRXKKKXXXKNRXKK 704
+ + K K + K + E +++ + + K+ + KE + KKK K+ +
Sbjct: 289 EDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDED 348
Query: 703 KXXXTXXKXXKXXXXTXKXXKTEKENDXXKXXKXXXKXKXKN 578
+ K K K +KE+D + K K KN
Sbjct: 349 EDKDDKKKKKDDVDDDMKKDKKKKEDDDKEDEDDKKKDKKKN 390
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.3 bits (60), Expect = 8.3
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Frame = +2
Query: 92 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMNX 268
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 269 I--DKRLSWNAGEWGCSTWL---VSS--ERLWRPDVVLL 364
I D RLS+ C+T + VS +++W PD ++
Sbjct: 68 IWQDPRLSFKHLN-VCATNITLKVSDFRKKIWTPDTCII 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,581,224
Number of Sequences: 27780
Number of extensions: 238741
Number of successful extensions: 791
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2412704140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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