Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I24
(936 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 42 6e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 40 2e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 38 1e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 2e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 31 0.011
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 30 0.026
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 30 0.026
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 26 0.56
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 24 2.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 5.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 9.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 9.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 42.3 bits (95), Expect = 6e-06
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +2
Query: 77 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 235
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 236 VRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
+ L+ D + W+ E+G T L V SE +W PD+VL
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVL 109
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.9 bits (94), Expect = 8e-06
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 65 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 223
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 224 SESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 361
T + + + N D +L WN ++G T V SE +W PD+VL
Sbjct: 65 QIMTTNVWVEQEWN--DYKLKWNPDDYGGVDTLHVPSEHIWLPDIVL 109
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +2
Query: 95 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 259
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 260 MNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
+ L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 37.9 bits (84), Expect = 1e-04
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +2
Query: 122 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILADLQMNXIDKR 280
+ D LL+ Y+R P LT+ L N++ T + + + N D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWN--DYK 94
Query: 281 LSWNAGEWGCSTWL-VSSERLWRPDVVL 361
L WN E+G L V SE +W PD+VL
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVL 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.5 bits (83), Expect = 2e-04
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNX 268
N +++S ++D+LL YD PD V + + +R I E + T + + +
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 269 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLKXGXXHRRGLRSP 403
+D+RL++ G+ + + R+W+PD + + SP
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSP 106
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.3 bits (80), Expect = 4e-04
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 8/97 (8%)
Frame = +2
Query: 95 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 253
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 254 LQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
++ + D +L W+ E+G L V S+ +WRPD+VL
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVL 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.002
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNXIDKRLS 286
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ + D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVL 361
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.002
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNXIDKRLS 286
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ + D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 287 WNAGEWGCSTWL-VSSERLWRPDVVL 361
W E+G L V S+ +WRPD+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
+++ LL++Y+ P + V + L+ ++ E + A L++ +D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVL 361
WN E+ G ++ +LW+PD+++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILM 143
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/86 (22%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +2
Query: 122 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNXIDKRLS 286
+++ LL++Y+ P + V + L+ ++ E + A L++ +D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 287 WNAGEW-GCSTWLVSSERLWRPDVVL 361
WN E+ G ++ +LW+PD+++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILM 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.004
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 361
++ E + A L++ +D L WN E+ G ++ +LW+PD+++
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILM 75
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.011
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +2
Query: 176 IVVNLTLHLRHANIRESESTVRILADLQMNXIDKRLSWNAGEW-GCSTWLVSSERLWRPD 352
+V L+LH ++ E + + D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVL 361
+L
Sbjct: 92 TIL 94
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 30.3 bits (65), Expect = 0.026
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNXIDKRLSWNAGEWG-CSTWLVSSERLWR 346
K+ VN L ++ N+ E ++ L+ D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 347 PDVVL 361
PD+VL
Sbjct: 111 PDIVL 115
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.3 bits (65), Expect = 0.026
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Frame = +2
Query: 53 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 217
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 218 RESESTVRILADLQMNXIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVL 361
E + L++ D + WN ++G L + RLW+PDV++
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLM 112
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 25.8 bits (54), Expect = 0.56
Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 110 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNXID 274
++++++++LL Y+ P + VV + +R + E + + + + D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 275 KRLSWNAGEWGCSTWLVSSERLWRPD 352
RLS+ S + ER+WRPD
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.8 bits (49), Expect = 2.3
Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNX 268
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + +
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 269 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 352
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 5.3
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Frame = +2
Query: 101 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNX 268
N ++S ++DS +YD+ P+ + V +T++ L +++ E + +
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 269 IDKRLSWNAGEWGCSTWLVSSE---RLWRPD 352
D RL++ G T V SE +W PD
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPD 97
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 9.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 319 PSAAAPFPCVPTQS 278
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 9.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 118 GQ*CCVFAFCRTSYSTSEEKXVTR 47
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,580
Number of Sequences: 438
Number of extensions: 3162
Number of successful extensions: 46
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30597567
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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