BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I23
(924 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC... 53 5e-07
BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p pro... 53 6e-07
AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA... 53 6e-07
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 53 6e-07
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 53 6e-07
AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB... 53 6e-07
BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p pro... 34 0.32
AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p pro... 34 0.32
AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC... 34 0.32
AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB... 34 0.32
AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD... 34 0.32
AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA... 34 0.32
BT016139-1|AAV37024.1| 587|Drosophila melanogaster AT30209p pro... 30 3.9
AE014296-3771|ABI31273.1| 121|Drosophila melanogaster CG41457-P... 29 6.8
BT011052-1|AAR31123.1| 730|Drosophila melanogaster RE45331p pro... 29 9.0
AY271259-1|AAQ01726.1| 730|Drosophila melanogaster MITF protein. 29 9.0
AE014135-211|ABC65835.1| 730|Drosophila melanogaster CG17469-PB... 29 9.0
AE014135-210|ABC65834.1| 730|Drosophila melanogaster CG17469-PA... 29 9.0
>AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC,
isoform C protein.
Length = 833
Score = 53.2 bits (122), Expect = 5e-07
Identities = 50/165 (30%), Positives = 71/165 (43%), Gaps = 6/165 (3%)
Frame = +2
Query: 104 NINETAE-SKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXX 280
NI+ E SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 10 NISTNPEASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIR 69
Query: 281 XXXXXXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXG 460
V EERK+AI+EA RRE +L++ ++ G
Sbjct: 70 TRDTEKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFG 123
Query: 461 SSTPRLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
SSTPRLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 124 SSTPRLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 166
>BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p
protein.
Length = 887
Score = 52.8 bits (121), Expect = 6e-07
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Frame = +2
Query: 110 NETAESKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+++ SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 67 DDSQASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRD 126
Query: 290 XXXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXGSST 469
V EERK+AI+EA RRE +L++ ++ GSST
Sbjct: 127 TEKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFGSST 180
Query: 470 PRLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
PRLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 181 PRLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 220
>AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA,
isoform A protein.
Length = 887
Score = 52.8 bits (121), Expect = 6e-07
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 5/162 (3%)
Frame = +2
Query: 110 NETAESKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 289
+++ SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 67 DDSQASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRD 126
Query: 290 XXXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXGSST 469
V EERK+AI+EA RRE +L++ ++ GSST
Sbjct: 127 TEKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFGSST 180
Query: 470 PRLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
PRLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 181 PRLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 220
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 52.8 bits (121), Expect = 6e-07
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Frame = +2
Query: 113 ETAESKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
E SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 32 ERKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDT 91
Query: 293 XXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXGSSTP 472
V EERK+AI+EA RRE +L++ ++ GSSTP
Sbjct: 92 EKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFGSSTP 145
Query: 473 RLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
RLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 146 RLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 184
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 52.8 bits (121), Expect = 6e-07
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Frame = +2
Query: 113 ETAESKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
E SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 32 ERKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDT 91
Query: 293 XXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXGSSTP 472
V EERK+AI+EA RRE +L++ ++ GSSTP
Sbjct: 92 EKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFGSSTP 145
Query: 473 RLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
RLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 146 RLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 184
>AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB,
isoform B protein.
Length = 851
Score = 52.8 bits (121), Expect = 6e-07
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 5/161 (3%)
Frame = +2
Query: 113 ETAESKEAIDRSRLARGRREAEQRKRLDELRXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
E SK+ ++ + AR R+ E+ ++++ELR
Sbjct: 32 ERKASKDREEKLKYARDRQNEERHRKIEELRAQAEAAQRYREQKEEERRRRIEEIRTRDT 91
Query: 293 XXXXXVSECVEERKRAIWEASISRREALLQREKDXXXXXXXXXXXXXXXXXXXXXGSSTP 472
V EERK+AI+EA RRE +L++ ++ GSSTP
Sbjct: 92 EKRHQV----EERKKAIFEAEKERREYILKKNQE--RESRIEVKKRDRNSIGFAFGSSTP 145
Query: 473 RLLD-PLD----SAGFFWAARRAASTTNVMFTSAPLTRRAS 580
RLLD P D S FW RR+ S +NV A LTRR+S
Sbjct: 146 RLLDVPADYGLVSPSAFWGQRRSTSISNV--AGASLTRRSS 184
>BT003763-1|AAO41442.1| 652|Drosophila melanogaster RE39251p
protein.
Length = 652
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 542 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 593
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 558 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 613
Query: 861 XPXR 872
P R
Sbjct: 614 GPTR 617
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 586 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 637
>AY069625-1|AAL39770.1| 268|Drosophila melanogaster LD39545p
protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 158 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 209
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 174 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 229
Query: 861 XPXR 872
P R
Sbjct: 230 GPTR 233
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 202 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 253
>AE014296-964|AAN12098.1| 682|Drosophila melanogaster CG10625-PC,
isoform C protein.
Length = 682
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 572 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 623
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 588 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 643
Query: 861 XPXR 872
P R
Sbjct: 644 GPTR 647
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 616 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 667
>AE014296-963|AAF50773.2| 682|Drosophila melanogaster CG10625-PB,
isoform B protein.
Length = 682
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 572 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 623
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 588 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 643
Query: 861 XPXR 872
P R
Sbjct: 644 GPTR 647
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 616 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 667
>AE014296-962|AAN12097.1| 268|Drosophila melanogaster CG10625-PD,
isoform D protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 158 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 209
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 174 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 229
Query: 861 XPXR 872
P R
Sbjct: 230 GPTR 233
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 202 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 253
>AE014296-961|AAN12096.1| 268|Drosophila melanogaster CG10625-PA,
isoform A protein.
Length = 268
Score = 33.9 bits (74), Expect = 0.32
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRP-XPXXPXRXXPGP 830
+PG GP G PG T PG G P RP P P PGP
Sbjct: 158 KPGPFGPPGPPGPPGPPGPTRPGPYGPPGPPGPTGPTRPGPPGPPGPTRPGP 209
Score = 29.9 bits (64), Expect = 5.2
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGPXXXXRXPA*X 860
PG R GP G PG T P G P P P P R PGP R P
Sbjct: 174 PGPTRP-GPYGPPGPPGPTGPTRPGPPGPPGPTRPGPPGPPGPTR--PGPPGPTR-PGPP 229
Query: 861 XPXR 872
P R
Sbjct: 230 GPTR 233
Score = 29.5 bits (63), Expect = 6.8
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Frame = -3
Query: 826 PGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP---XDRXXPG 680
PG R G G G RP PG PG P P D+ PG
Sbjct: 202 PGPTRPGPPGPPGPTRPGPPGPTRPGPPGPTRPGPPGPSPNDPRYSDKETPG 253
>BT016139-1|AAV37024.1| 587|Drosophila melanogaster AT30209p
protein.
Length = 587
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGP 830
PG GPG G PG G G G P R P R PGP
Sbjct: 165 PGPRGYPGPGPR-GYPGPGPRGYPGPGPRGYPGRGPRGYPGPGPRGYPGP 213
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +3
Query: 681 PGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPG 827
PG GPG G PG G GRG P R P R PG
Sbjct: 173 PGPRGYPGPGPR-GYPGPGPRGYPGRGPRGYPGPGPRGYPGPGPRGYPG 220
>AE014296-3771|ABI31273.1| 121|Drosophila melanogaster CG41457-PA
protein.
Length = 121
Score = 29.5 bits (63), Expect = 6.8
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +3
Query: 291 TTDDNRSVNVWKNENVQYGKRPYPGAKHYCNERRTERSAWSAPA-PPGLRPDRRSLSVLR 467
TTD+ SV + K YG+RP K E +++ A G R +R+ + R
Sbjct: 19 TTDEPESVGILKALEKDYGRRPAVEVKVTGGEALVRSLDFASMAEASGSRSERQEIGQER 78
Query: 468 HRGSWIR*IRPDSSGQR 518
GS R R ++S R
Sbjct: 79 RNGSRERRERREASRDR 95
>BT011052-1|AAR31123.1| 730|Drosophila melanogaster RE45331p
protein.
Length = 730
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 494 SAGFFWAARRAASTTNVMFTSAPLTRRASAXAT*LFRTPTLKDEPD 631
S+G + R +++++++ TSAP++ S+ AT + P+ +PD
Sbjct: 311 SSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPD 356
>AY271259-1|AAQ01726.1| 730|Drosophila melanogaster MITF protein.
Length = 730
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 494 SAGFFWAARRAASTTNVMFTSAPLTRRASAXAT*LFRTPTLKDEPD 631
S+G + R +++++++ TSAP++ S+ AT + P+ +PD
Sbjct: 311 SSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPD 356
>AE014135-211|ABC65835.1| 730|Drosophila melanogaster CG17469-PB,
isoform B protein.
Length = 730
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 494 SAGFFWAARRAASTTNVMFTSAPLTRRASAXAT*LFRTPTLKDEPD 631
S+G + R +++++++ TSAP++ S+ AT + P+ +PD
Sbjct: 311 SSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPD 356
>AE014135-210|ABC65834.1| 730|Drosophila melanogaster CG17469-PA,
isoform A protein.
Length = 730
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/46 (28%), Positives = 28/46 (60%)
Frame = +2
Query: 494 SAGFFWAARRAASTTNVMFTSAPLTRRASAXAT*LFRTPTLKDEPD 631
S+G + R +++++++ TSAP++ S+ AT + P+ +PD
Sbjct: 311 SSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSELPSFDSDPD 356
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,248,538
Number of Sequences: 53049
Number of extensions: 534829
Number of successful extensions: 1782
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1743
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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