Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I23
(924 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.6
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
Z81536-8|CAB04369.2| 352|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 28 8.2
U41034-3|AAA82380.2| 127|Caenorhabditis elegans Hypothetical pr... 28 8.2
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 28 8.2
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 28 8.2
AC006611-2|AAK85457.1| 867|Caenorhabditis elegans Protein kinas... 28 8.2
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 74 SSSKMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
SS D++RN SK A R R R RR+AE+R R
Sbjct: 104 SSRNNEDELRNPPRRERSKSAERRDRELRERRDAERRDR 142
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1405 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1440
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1417 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1452
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1304 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1339
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1386 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1421
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1405 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1440
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1417 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1452
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1304 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1339
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1386 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1421
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1417 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1452
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1417 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1452
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 83 KMVDDVRNINETAESKEAIDRSRLARGRREAEQRKR 190
+M +D AE E R R RREAE RKR
Sbjct: 1417 RMAEDAERARREAEEAERRRREEEERRRREAEDRKR 1452
>Z81536-8|CAB04369.2| 352|Caenorhabditis elegans Hypothetical
protein F40D4.11 protein.
Length = 352
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = -2
Query: 209 ALEVRLVAFFALLHVSPALISTGRWPL 129
AL ++L++F+ +L +PA + + +WPL
Sbjct: 40 ALSLQLLSFYVILTKTPASMKSVKWPL 66
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/43 (30%), Positives = 15/43 (34%)
Frame = -3
Query: 829 GPGXXRXGXXGXGRXXXHGXAAXPRPXSPGXVXPGXPXXXPGP 701
GP G G + P P +PG P P PGP
Sbjct: 196 GPAGNDGAAGTPGPDGPAGESTYPEPAAPGPAGPPGPAGPPGP 238
>U41034-3|AAA82380.2| 127|Caenorhabditis elegans Hypothetical
protein M02D8.2 protein.
Length = 127
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/52 (26%), Positives = 22/52 (42%)
Frame = +3
Query: 270 PSREQKTTTDDNRSVNVWKNENVQYGKRPYPGAKHYCNERRTERSAWSAPAP 425
PS + + N ++ W+N NV P PG +Y + E + S P
Sbjct: 18 PSDDLRWVPIPNEALEHWQNGNVGVMISPGPGEYYYASREEYEEAVMSGKHP 69
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = +2
Query: 71 LSSSKMVDDVRNINETAESKEAI---DRSRLARGRREAEQRKRLDE 199
L +M ++R + E E + A D + A RR+ E+R+R DE
Sbjct: 100 LEKEQMEQELRELKEKQEKRRAEREEDERQFAERRRQDEERRRKDE 145
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/51 (35%), Positives = 20/51 (39%)
Frame = +3
Query: 678 EPGXXRSXGPGXXXGXPGXTXPGLXGRGXAAXPXXXXRPXPXXPXRXXPGP 830
EPG GP G PG PG G+ A +P P P PGP
Sbjct: 199 EPGPAGPAGPPGPDGQPG--APGPDGQPGAGGTTSTNQPGPPGP-AGPPGP 246
>AC006611-2|AAK85457.1| 867|Caenorhabditis elegans Protein kinase
protein 32, isoforma protein.
Length = 867
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -2
Query: 395 GPSLVAIMLRAGIWTLPILHVFVLPHI---H*PVVVCRRLLLSAR 270
GPS +W P+L + LPHI H P+ VC + L R
Sbjct: 53 GPSPQTAGSGDSLWLHPMLRITQLPHIYARHLPIGVCDEIKLEMR 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,293,033
Number of Sequences: 27780
Number of extensions: 274056
Number of successful extensions: 939
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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