Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I22
(866 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 59 4e-11
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 58 1e-10
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 57 2e-10
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 55 6e-10
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 55 6e-10
AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor su... 44 2e-06
AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory recept... 26 0.33
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 23 4.1
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 7.2
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 21 9.5
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 21 9.5
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 21 9.5
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 59.3 bits (137), Expect = 4e-11
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V +NGS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 507 TFKXGSRMHNSDEMDXVI 560
K GS ++ +++D V+
Sbjct: 143 DMKFGSWTYDGNQLDLVL 160
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 57.6 bits (133), Expect = 1e-10
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+G L ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V +NGS ++ + + + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 142
Query: 507 TFKXGSRMHNSDEMDXVI 560
K GS ++ +++D V+
Sbjct: 143 DMKFGSWTYDGNQLDLVL 160
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 56.8 bits (131), Expect = 2e-10
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 329
ES P ++ LTL + ++ E + A L + W D L WN E+ G ++
Sbjct: 25 ESEP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYNLKWNESEYGGVKDLRITP 82
Query: 330 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 506
+LW+PDV++ N+A G + V + GS ++ + M + +P D Q C
Sbjct: 83 NKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGSCLYVPPGIFKSTCKMDITWFPFDDQHC 142
Query: 507 TFKXGSRMHNSDEMDXVI 560
K GS ++ +++D V+
Sbjct: 143 DMKFGSWTYDGNQLDLVL 160
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 55.2 bits (127), Expect = 6e-10
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 425
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDXVI 560
++ + M + +P D Q C K GS ++ +++D V+
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVL 160
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 55.2 bits (127), Expect = 6e-10
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 425
L + W D L WN E+G L ++ +LW+PDV++ N+A G + V + GS
Sbjct: 56 LSLEWNDYNLKWNESEYGGVKDLRITPNKLWKPDVLMYNSADEGFDGTFQTNVVVKHGGS 115
Query: 426 VSWIKRLDISTPISMQLDNWPNDMQTCTFKXGSRMHNSDEMDXVI 560
++ + M + +P D Q C K GS ++ +++D V+
Sbjct: 116 CLYVPPGIFKSTCKMDITWFPFDDQHCDMKFGSWTYDGNQLDLVL 160
>AF025669-1|AAB81523.1| 243|Tribolium castaneum GABA receptor
subunit protein.
Length = 243
Score = 43.6 bits (98), Expect = 2e-06
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Frame = +3
Query: 108 SLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNWIDK 275
++S ++DS +YD+ P+ + V +T++ L +++ E + + + W D
Sbjct: 40 NISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDP 99
Query: 276 RLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSV 428
RL++ G T V SE +W PD +N ATT+ ++ RV ++GS+
Sbjct: 100 RLAYGKRP-GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RVHHSGSI 155
Query: 429 SWIKRLDISTPISMQLDNWPNDMQTC 506
+ RL I+ M L P D Q C
Sbjct: 156 TRSIRLTITASCPMNLQYLPMDRQLC 181
>AM292361-1|CAL23173.2| 373|Tribolium castaneum gustatory receptor
candidate 40 protein.
Length = 373
Score = 26.2 bits (55), Expect = 0.33
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 393 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPND 494
A+ + N + SW + ++ + + M LDNW ND
Sbjct: 272 AIEGIIFFNLAKSWPQLIEKWSRVEMALDNWKND 305
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.6 bits (46), Expect = 4.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = +1
Query: 1 YWIDQLS*NVDDLYY 45
YW+D++ N +D+Y+
Sbjct: 441 YWVDEILANHNDVYF 455
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 21.8 bits (44), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 440 LYPG-DGAVIRYTGAESVVPGGGC 372
LY G DG+VI E VV G GC
Sbjct: 348 LYLGSDGSVILKNYKEMVVVGCGC 371
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 36 LILFCYXFLLTCAIASAAECENATS 110
L L Y + T + A EC N+TS
Sbjct: 163 LALIEYILMQTNKLVLALECNNSTS 187
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 36 LILFCYXFLLTCAIASAAECENATS 110
L L Y + T + A EC N+TS
Sbjct: 163 LALIEYILMQTNKLVLALECNNSTS 187
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 36 LILFCYXFLLTCAIASAAECENATS 110
L L Y + T + A EC N+TS
Sbjct: 163 LALIEYILMQTNKLVLALECNNSTS 187
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,650
Number of Sequences: 336
Number of extensions: 3154
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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