SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_I19
         (863 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    48   3e-07
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    46   2e-06
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    46   2e-06
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    45   3e-06
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    45   3e-06
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    45   3e-06
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    44   5e-06
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    44   8e-06
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    43   1e-05
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    42   2e-05
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    40   7e-05
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    38   3e-04
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   2.2  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    23   9.1  

>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 48.4 bits (110), Expect = 3e-07
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
 Frame = +2

Query: 140 MIDSLLATYD-------RESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKR 298
           ++++LLATY+        ES P  +V   LTL  +  ++ E    +   A L + W D  
Sbjct: 27  LLNNLLATYNTLERPVANESDP-LEVKFGLTLQ-QIIDVDEKNQILTTNAWLNLEWNDYN 84

Query: 299 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
           L WN  E+G    L ++  +LW+PDV++ N+A     G Y     V NNGS
Sbjct: 85  LRWNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
 Frame = +2

Query: 140 MIDSLLATYD-------RESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKR 298
           ++++LLATY+        ES P  +V   LTL  +  ++ E    +     L + W D  
Sbjct: 27  LLNNLLATYNTLERPVANESDP-LEVKFGLTLQ-QIIDVDEKNQLLITNIWLSLEWNDYN 84

Query: 299 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
           L WN  E+G    L ++  +LW+PDV++ N+A     G Y     V NNGS
Sbjct: 85  LRWNDSEYGGVRDLRITPNKLWKPDVLMYNSADEGFDGTYHTNIVVKNNGS 135


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
 Frame = +2

Query: 140 MIDSLLATYDRESPPDSK----VVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKR 298
           + D LL+ Y+R   P S     V+V L L L      N+++   T  I   L+  W D +
Sbjct: 39  LYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNIW--LEHEWQDHK 96

Query: 299 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
             W+  E+G  T L V SE +W PD+VL N A
Sbjct: 97  FKWDPAEYGGVTELYVPSEHIWLPDIVLYNNA 128



 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 504 WPNDMQTCTFKFGS 545
           +P D QTC  KFGS
Sbjct: 167 FPFDQQTCFMKFGS 180


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 45.2 bits (102), Expect = 3e-06
 Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +2

Query: 152 LLATYD---RESPPDSKVVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW 322
           LL  YD   R S   +   V   + + H  I E +ST+ +   ++ +W D +L+WN   +
Sbjct: 46  LLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWNPASY 105

Query: 323 G-CSTWLVSSERLWRPDVVLLNAA 391
           G  +        +WRPDVVL N A
Sbjct: 106 GNLNVVRWDPTIVWRPDVVLYNNA 129


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
 Frame = +2

Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
           L++ W D  + WN+ E+G    L +   RLW+PDV++ N+A     G Y     V NNGS
Sbjct: 59  LKLEWNDMNVRWNSSEYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 118


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 44.8 bits (101), Expect = 3e-06
 Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
 Frame = +2

Query: 272 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 445
           L++ W D  L WN  E+G    L +   R+W+PDV++ N+A     G Y     V NNGS
Sbjct: 91  LKLEWNDMNLRWNTSEYGGVRDLRIPPHRIWKPDVLMYNSADEGFDGTYPTNVVVRNNGS 150


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 44.4 bits (100), Expect = 5e-06
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 10/113 (8%)
 Frame = +2

Query: 140 MIDSLLATYDRESPP--DSKVVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 31  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90

Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSV 448
           W   E+G    L V S+ +WRPD+VL N A    G Y +    +A V NNG V
Sbjct: 91  WEPKEYGGVQMLHVPSDHIWRPDIVLYNNA---DGHYEVTLMTKATVYNNGMV 140



 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = +3

Query: 486 SMQLDNWPNDMQTCTFKFGS 545
           S+ ++ +P D+QTC  K GS
Sbjct: 153 SIDVEYFPYDVQTCVLKLGS 172


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 43.6 bits (98), Expect = 8e-06
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
 Frame = +2

Query: 140 MIDSLLATYDRESPP----DSKVVVNLTLHLRH---ANIRESESTVRILADLQMNWIDKR 298
           + D LL+ Y+R   P      ++ V + L L      N++    T  +   ++  W D +
Sbjct: 27  LYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYK 84

Query: 299 LSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 391
           L WN  ++G   T  V SE +W PD+VL N A
Sbjct: 85  LKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 116



 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 489 MQLDNWPNDMQTCTFKFGS 545
           + ++ +P D QTC  KFGS
Sbjct: 150 IDVEYFPFDEQTCFMKFGS 168


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 43.2 bits (97), Expect = 1e-05
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +2

Query: 98  ASAAECENATSLSLMIDSLLATYDRESPPDSKVVVNLTLHLR-------HANIRESESTV 256
           A  + C        + D LL+ Y++   P   V   LT+ ++         N++    T 
Sbjct: 13  AVVSVCGGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTT 72

Query: 257 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
            +   ++  W D +L W   E+G    L V S+ +WRPD+VL N A
Sbjct: 73  NLW--VEQTWYDYKLKWEPKEYGGVEMLHVPSDHIWRPDIVLYNNA 116



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 489 MQLDNWPNDMQTCTFKFGS 545
           + ++ +P D QTC  KFGS
Sbjct: 150 IDVEYFPFDEQTCVMKFGS 168


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 41.9 bits (94), Expect = 2e-05
 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
 Frame = +2

Query: 140 MIDSLLATYDRESPP--DSKVVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
           + D LL+ Y++   P  ++  V+ + + L+ + + +     +I+     ++ +W D +L 
Sbjct: 31  LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 90

Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA 391
           W   E+G    L V S+ +WRPD+VL N A
Sbjct: 91  WEPKEYGGVQMLHVPSDHIWRPDIVLYNNA 120



 Score = 24.6 bits (51), Expect = 3.9
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 489 MQLDNWPNDMQTCTFKFGS 545
           + ++ +P D QTC  KFGS
Sbjct: 154 IDVEYFPFDEQTCVLKFGS 172


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 40.3 bits (90), Expect = 7e-05
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
 Frame = +2

Query: 140 MIDSLLATYDRESPPDSKVVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 304
           + D LL+ Y+R   P       LT  L L+ + + E     +++     ++  W D +L 
Sbjct: 33  LYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLR 92

Query: 305 WNAGEWGCSTWL-VSSERLWRPDVVLLN 385
           W+  E+G    L V SE++W PD+VL N
Sbjct: 93  WDPEEYGGVEMLYVPSEQIWLPDIVLYN 120



 Score = 26.2 bits (55), Expect = 1.3
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 489 MQLDNWPNDMQTCTFKFGS 545
           M ++ +P D QTC  KFGS
Sbjct: 156 MNVEYFPYDEQTCLMKFGS 174


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +2

Query: 230 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG 406
           N+ E    ++    L++ W D +L W+  ++ G     +  +++W+PD+VL N A    G
Sbjct: 65  NVNEKNQIMKSNVWLRLVWSDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121

Query: 407 DYALR 421
           +Y +R
Sbjct: 122 NYEVR 126



 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 504 WPNDMQTCTFKFGS 545
           +P D QTC  KFGS
Sbjct: 158 FPFDQQTCIMKFGS 171


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
 Frame = +2

Query: 245  ESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVV--LLNAAATTAGDYAL 418
            ++  + + D+    ++K L W A +   S     + ++W  D+   L N  A T+  Y L
Sbjct: 933  QTASKYMNDIDAAMVEKALDWLASKQHSSGRFDETGKVWHKDMQGGLRNGVALTS--YVL 990

Query: 419  RARVSNNGSVSXIKR-LDISTPIFYAVRQLA 508
             A + N+  ++ +K  + I   + Y   QLA
Sbjct: 991  TALLEND--IAKVKHAVVIQNGMNYLSNQLA 1019


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.4 bits (48), Expect = 9.1
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -2

Query: 511 LGQLSNCIENWSANVQALYXGDGAVIRYTGAE 416
           LGQLSN   N +      + G G  + Y G E
Sbjct: 320 LGQLSNVNRNSTIENTRRHIGKGVHLYYVGGE 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 730,373
Number of Sequences: 2352
Number of extensions: 14690
Number of successful extensions: 57
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -