Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I17
(895 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228; Eukary... 322 6e-87
UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44; Bi... 293 5e-78
UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;... 225 2e-57
UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6; Tr... 220 4e-56
UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n... 188 1e-46
UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 ... 132 9e-30
UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6; Euryarc... 102 1e-20
UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured m... 100 6e-20
UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured m... 98 2e-19
UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6; Thermop... 95 2e-18
UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13; Euryar... 94 4e-18
UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4; Thermoc... 87 6e-16
UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofi... 86 1e-15
UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5; Thermop... 82 2e-14
UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 81 4e-14
UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1; ... 79 2e-13
UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1; ... 77 5e-13
UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus N... 76 1e-12
UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4; Euryarc... 73 1e-11
UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1; Nanoarc... 64 6e-09
UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4; Thermop... 60 1e-07
UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1; Staphylo... 58 2e-07
UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarcha... 52 2e-05
UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella... 49 2e-04
UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1; ... 34 5.6
UniRef50_Q69NC6 Cluster: Putative uncharacterized protein OJ1742... 34 5.6
UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1; ... 33 7.4
>UniRef50_P39023 Cluster: 60S ribosomal protein L3; n=228;
Eukaryota|Rep: 60S ribosomal protein L3 - Homo sapiens
(Human)
Length = 403
Score = 322 bits (792), Expect = 6e-87
Identities = 142/218 (65%), Positives = 172/218 (78%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HGS+GF P+KRS RHRGKVK+ P DDP KPVHLTA +GYKAGMTH+VRE DRPGSK+N
Sbjct: 9 PRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGSKVN 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
KKE+VEAVTI+ TPPMV VG+VG++ TP GLR TV+AEH+S++C+ RFYKNW+
Sbjct: 69 KKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKK 128
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
WQDE G+K +EKDF M +YC V+RVIAHTQM+LL RQKKAH+MEIQ+NGG
Sbjct: 129 AFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGG 188
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
T+ + + WA E LE+ +PV+ VFGQ EMID IGVTKGK
Sbjct: 189 TVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGK 226
>UniRef50_Q92901 Cluster: 60S ribosomal protein L3-like; n=44;
Bilateria|Rep: 60S ribosomal protein L3-like - Homo
sapiens (Human)
Length = 407
Score = 293 bits (718), Expect = 5e-78
Identities = 132/221 (59%), Positives = 162/221 (73%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HG +GF P KRS RHRGKVK P DDP +PVHLTA +GYKAGMTH +RE RPG KI+
Sbjct: 9 PRHGHLGFLPHKRSHRHRGKVKTWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGLKIS 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
K+E VEAVTI+ TPP+V VGVVG++ TP GLR+ T++AEH+S++CR RFYK+W+
Sbjct: 69 KREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKK 128
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
W+D G+K ++KDF M +YC V+RVI HTQMKLL RQKKAHIMEIQLNGG
Sbjct: 129 AFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGG 188
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGKDTR 722
T+ + V WA LEK +PV SVF Q E+ID I VTKG+ +
Sbjct: 189 TVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVTKGRGVK 229
>UniRef50_Q6BEU5 Cluster: Putative uncharacterized protein rpl-3;
n=1; Caenorhabditis elegans|Rep: Putative
uncharacterized protein rpl-3 - Caenorhabditis elegans
Length = 353
Score = 225 bits (549), Expect = 2e-57
Identities = 98/160 (61%), Positives = 119/160 (74%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HG MGF PKKRSR +RG++KA P DD KP+HLTA +GYKAGMTH+VR+ D+PGSK+N
Sbjct: 9 PRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVN 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
KKE+VEAVTI+ TPPMV GV G++ TP G RAL T+WAEH+SE+ R RFY NW
Sbjct: 69 KKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSNWAKSKKK 128
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQM 539
WQDE G+K IE DF K+ +YC+ +RVIAHTQM
Sbjct: 129 AFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
>UniRef50_Q581Q2 Cluster: Ribosomal protein L3, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein L3, putative -
Trypanosoma brucei
Length = 480
Score = 220 bits (537), Expect = 4e-56
Identities = 108/233 (46%), Positives = 146/233 (62%), Gaps = 3/233 (1%)
Frame = +3
Query: 21 TRLPACRTENXQHPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTH 200
T + C+ E HP HG +GF P+KRSR+ RG+ ++ P DDP + HLT+ + YKAGMTH
Sbjct: 50 TNMSHCKFE---HPRHGHLGFLPRKRSRQIRGRARSFPKDDPSQKPHLTSFMVYKAGMTH 106
Query: 201 VVREPDRPGSKINKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCR 380
+VR+ DRPGSK+NKKE+VE VTI+ PPMV VG+VG+ TP G + + TVWA H S + R
Sbjct: 107 IVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTVWAHHTSVEFR 166
Query: 381 XRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQ 560
RFYKNW + GR + + K + +++RV+AHTQ++ L +
Sbjct: 167 RRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAHTQLRKLRNNR 226
Query: 561 ---KKAHIMEIQLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKG 710
KKAH+ EIQ+NGGTI ++ A LEK + +DSVF Q E D VTKG
Sbjct: 227 VGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAVTKG 279
>UniRef50_UPI0000503B42 Cluster: UPI0000503B42 related cluster; n=2;
Rattus norvegicus|Rep: UPI0000503B42 UniRef100 entry -
Rattus norvegicus
Length = 380
Score = 188 bits (459), Expect = 1e-46
Identities = 89/183 (48%), Positives = 119/183 (65%)
Frame = +3
Query: 48 NXQHPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPG 227
N P HGS+GF P+K S H GKVK P DD KPVHLT + +KA MTH++++ DRP
Sbjct: 5 NFSAPRHGSLGFSPQKHSCWHHGKVKLFPKDDSSKPVHLTDFLVHKANMTHIIQKVDRPE 64
Query: 228 SKINKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYX 407
SK+NKKE+VE V I+ TPPMV +G+VG+I P GL V+AEH+S + FYKNW+
Sbjct: 65 SKMNKKEVVEGVAIVETPPMVVMGIVGYIEIPRGLWTFKAVFAEHISGKSKKCFYKNWHS 124
Query: 408 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQ 587
++G++ +E +FK M +YC V+ ++AHTQM LL QKKAH+MEIQ
Sbjct: 125 EKKASTKYF------DMGKRQLEMEFKSMKKYCQVICIVAHTQMCLLSLHQKKAHLMEIQ 178
Query: 588 LNG 596
+ G
Sbjct: 179 VMG 181
>UniRef50_UPI000061854E Cluster: 60S ribosomal protein L3 (HIV-1 TAR
RNA-binding protein B) (TARBP-B).; n=1; Bos taurus|Rep:
60S ribosomal protein L3 (HIV-1 TAR RNA-binding protein
B) (TARBP-B). - Bos Taurus
Length = 340
Score = 132 bits (320), Expect = 9e-30
Identities = 82/207 (39%), Positives = 115/207 (55%)
Frame = +3
Query: 93 KRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKINKKEIVEAVTII 272
K S +H+GKV P D KPV+L+A +GY+AGMTHVVR+ DRPGSK++KKE+VE VTI+
Sbjct: 1 KCSSQHQGKVTGFPKDGSSKPVYLSAFLGYQAGMTHVVRKVDRPGSKVHKKEVVEVVTIV 60
Query: 273 XTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXXXXXXXXXXWQD 452
T P + VG VG T GL+ +V+A+H+S +C+ K Y W+
Sbjct: 61 ETMPFMTVGTVGCTETIWGLQTFKSVFAKHISNECKRTGIK--YKTNTSPNTKARSSWR- 117
Query: 453 ELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDXVKWAXE 632
G ++ TQM LL QKKAH+ E Q+N G + + WA +
Sbjct: 118 --GTSAL-------------------TQMCLLPLCQKKAHLTESQVNRGPVA-KLDWAHK 155
Query: 633 HLEKPIPVDSVFGQXEMIDCIGVTKGK 713
LE+ +PV+ +F + + IG TKGK
Sbjct: 156 KLEQQVPVNHIF-RVRRLFVIGTTKGK 181
>UniRef50_P54014 Cluster: 50S ribosomal protein L3P; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanococcus jannaschii
Length = 335
Score = 102 bits (244), Expect = 1e-20
Identities = 70/223 (31%), Positives = 111/223 (49%), Gaps = 1/223 (0%)
Frame = +3
Query: 48 NXQHPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPG 227
N P GS+ F P+KR++R ++++ P +D V L A YKAGM+H + D P
Sbjct: 4 NINRPRRGSLAFSPRKRAKRPVPRIRSWPEEDT---VRLQAFPVYKAGMSHAFIKEDNPK 60
Query: 228 SKINKKEIVEAVTIIXTPPM-VCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWY 404
S +E+ +TI+ PP+ VC V + L L VWA+++ ++ +
Sbjct: 61 SPNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWADNLDKELERKI----- 115
Query: 405 XXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEI 584
+ RK++E D + + VRV+ HT KL +KK I+EI
Sbjct: 116 ------------KLPKKEDRKTVE-DLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEI 162
Query: 585 QLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
++ G IE+ + +A E L K + + VF + E++D IGVTKGK
Sbjct: 163 RIGGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGK 205
>UniRef50_Q673S9 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein L3 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 358
Score = 100 bits (239), Expect = 6e-20
Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GSMGF P+KR+ R G++ + P + + + + G+KAGMTHV+ P S
Sbjct: 7 PKRGSMGFSPRKRAIRPFGRITSWPETESSE-IRVQGFAGWKAGMTHVLMRDTNPHSTSA 65
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMS--EDCRXRFYKNWYXXX 413
+EI +AVT++ PPM + V G+ TP+G++ +WA+ S + RF
Sbjct: 66 GQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAGEIWADSSSGPDGLMPRFANQTRGDR 125
Query: 414 XXXXXXXXXXWQDELGRK--SIEKDFKKMIRYCNV--VRVIAHTQMKLLXQRQKKAH-IM 578
+ + + D + N+ VR+I TQ L+ K IM
Sbjct: 126 DIEEGRKPAKRAGRIPVREGGMNGDALAALTDSNLCEVRLIVATQPALVKSVPSKTPVIM 185
Query: 579 EIQLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
E+ L GG ++WA E L I +D V+ + +D +G+TKGK
Sbjct: 186 EVGLVGGDTGAKLEWAHERLGGEIGIDDVYEAGKELDVVGITKGK 230
>UniRef50_Q2QAT1 Cluster: Ribosomal protein L3; n=1; uncultured
marine group II euryarchaeote HF70_59C08|Rep: Ribosomal
protein L3 - uncultured marine group II euryarchaeote
HF70_59C08
Length = 338
Score = 98.3 bits (234), Expect = 2e-19
Identities = 71/218 (32%), Positives = 101/218 (46%), Gaps = 1/218 (0%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GSMGF P+KR+ R G+VK+ P D + V + G+KAGMTHV+ PGS
Sbjct: 7 PKKGSMGFGPRKRANRPYGRVKSWPETDSDE-VRVQGFAGWKAGMTHVMMRDLNPGSPSA 65
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
E+ +AVT++ PPM + V G+ TP+G + WA S D +
Sbjct: 66 GAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGEAWA---SADKLSDVIPSLPRRIPE 122
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQM-KLLXQRQKKAHIMEIQLNG 596
D+L + + VR+I +Q K+ K IME+ L G
Sbjct: 123 RKEHDANAHLDKLRESDLAE-----------VRLIVSSQPDKVSAVGSKSPEIMEMGLTG 171
Query: 597 GTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKG 710
G + + WA E L + + ++ VF ID IGVTKG
Sbjct: 172 GDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKG 209
>UniRef50_Q9YFM2 Cluster: 50S ribosomal protein L3P; n=6;
Thermoprotei|Rep: 50S ribosomal protein L3P - Aeropyrum
pernix
Length = 344
Score = 95.1 bits (226), Expect = 2e-18
Identities = 76/221 (34%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS+GF P+KR+ R +VK P D KPV L A +GY+AGMTHV DRPG +
Sbjct: 9 PRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPL-AFLGYRAGMTHVFMVDDRPGRPTS 67
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPH-GLRALLTVWAEHMSEDCRXRFYKNWYXXXX 416
KEI VTI+ TPPM V + P+ G +L WA+ E
Sbjct: 68 GKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPE------------LEL 115
Query: 417 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLL-XQRQKKAHIMEIQLN 593
+ + KS+E+ K VR+IA +Q KL +KK ++EI++
Sbjct: 116 QRRISTLGSFDTDKMLKSLEERLDK----AEDVRLIAASQPKLAGGLSKKKPDLLEIKVG 171
Query: 594 G-GTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
G + +A + L I V+ VF + +++D I VTKGK
Sbjct: 172 GVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGK 212
>UniRef50_Q8TY90 Cluster: 50S ribosomal protein L3P; n=13;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Methanopyrus kandleri
Length = 361
Score = 94.3 bits (224), Expect = 4e-18
Identities = 65/222 (29%), Positives = 100/222 (45%)
Frame = +3
Query: 48 NXQHPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPG 227
N P GS+ F P+KR+ R ++++ P ++ V + GYKAGMTH + D P
Sbjct: 8 NPGRPRRGSLAFSPRKRASRPVPRIRSWPDEER---VRVQGFAGYKAGMTHAIMIDDWPN 64
Query: 228 SKINKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYX 407
S +EI VTI+ PPM + + TP G R + WAE E R +
Sbjct: 65 SPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTEAWAEIPEELEMDRVF----- 119
Query: 408 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQ 587
+EL + I ++ +RVI TQ K +KK +ME +
Sbjct: 120 TVPKDGEAGDLDKIEELVDEGIVEE----------IRVIVATQPKKAGVPKKKPDVMEYR 169
Query: 588 LNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+ G + + ++A E L + I VF + E++D +TKGK
Sbjct: 170 IGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGK 211
>UniRef50_Q8TZZ8 Cluster: 50S ribosomal protein L3P; n=4;
Thermococcaceae|Rep: 50S ribosomal protein L3P -
Pyrococcus furiosus
Length = 365
Score = 87.0 bits (206), Expect = 6e-16
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS+GF P+KR++ ++++ P + V + GYKAGMTH++ D PG N
Sbjct: 7 PRRGSLGFSPRKRAKSIVPRIRSWPKETE---VRMLGFAGYKAGMTHILMIDDEPG-LTN 62
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSED---CRXRFYK----- 395
KEI VTII TPP+ G+ + GL V D + R K
Sbjct: 63 GKEIFMPVTIIETPPLRVFGIRAYRMGYLGLETATEVIVPDFPLDNYPAKERKGKPKPKM 122
Query: 396 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNV--VRVIAHTQMKLLXQRQKKA 569
+Y + E+ + + + + MI+ + VR I TQ ++ + +KK
Sbjct: 123 TFYKLLERRIATLPKNYTQEMFEQKLGQ-LEDMIKEGEIVDVRAIVATQPWVI-KLKKKP 180
Query: 570 HIMEIQLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGKDTR 722
+ME + G ++E+ + E L K + V V + E++D I VTKGK T+
Sbjct: 181 EVMEYAIGGTSVEEKFNYIKEKLGKELRVGEVLKEGELLDVIAVTKGKGTQ 231
>UniRef50_A1RWR0 Cluster: 50S ribosomal protein L3; n=1; Thermofilum
pendens Hrk 5|Rep: 50S ribosomal protein L3 -
Thermofilum pendens (strain Hrk 5)
Length = 334
Score = 85.8 bits (203), Expect = 1e-15
Identities = 65/218 (29%), Positives = 99/218 (45%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS +YP+KR+R +V+ P + GYK GM HV+ S
Sbjct: 7 PRRGSRAYYPRKRARSIVARVRRWPQNREG----FLGFAGYKVGMLHVIGVEMNKNSPFY 62
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
+E A T+I PP+ V V + TP+G + L VWA+ + +D F
Sbjct: 63 GQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCEVWAKDLPKDLERVF---------- 112
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
+D+ + K +++ + VRV+A TQ +L +KK ++EI + GG
Sbjct: 113 ------PLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPELIEIAV-GG 165
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
E + A E L K + + VF + + ID I VTKGK
Sbjct: 166 PPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGK 203
>UniRef50_Q9UXA8 Cluster: 50S ribosomal protein L3P; n=5;
Thermoprotei|Rep: 50S ribosomal protein L3P - Sulfolobus
solfataricus
Length = 351
Score = 82.2 bits (194), Expect = 2e-14
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 5/223 (2%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS G P+KRS + P + P L +GYK GMTHV D P S N
Sbjct: 9 PRRGSAGLRPRKRSSELLPTPRTWPQINSQNP-KLLGFVGYKVGMTHVFMIDDWPNSPTN 67
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLT-VWAEHMSE--DCRXRFYK-NWYX 407
KEI VT++ PP++ + + + G ++T W+ + D R + + +
Sbjct: 68 GKEIYMPVTVLEVPPIIPLALRAYAIDGKGEPNVITEYWSSSSLQFLDITRRIHSISSFL 127
Query: 408 XXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKA-HIMEI 584
+ +L I+ + +++ + R++ TQ + + KKA ++EI
Sbjct: 128 KDDESKKKFDERFNTKL--DLIKSNLDRIVYF----RLLVSTQPRKIPSLGKKAPDLVEI 181
Query: 585 QLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
Q+ GG + + +A L K I + VF + ++ID +GVTKGK
Sbjct: 182 QIGGGEKKSQLDYALNILGKEITIRDVFKEGQLIDVVGVTKGK 224
>UniRef50_Q9HPD4 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Halobacterium salinarium (Halobacterium halobium)
Length = 335
Score = 81.0 bits (191), Expect = 4e-14
Identities = 70/224 (31%), Positives = 98/224 (43%), Gaps = 3/224 (1%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GSMGF P+KR+ + + P DD V L GYKAGMTHVV D+ +
Sbjct: 7 PRKGSMGFSPRKRAESEVPRFNSWPADDGE--VGLQGFAGYKAGMTHVVLVDDKANAPTE 64
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
E VT++ TPPM V + TP+G + L VWA+ E
Sbjct: 65 GMETTVPVTVVETPPMRAAAVRLYEDTPYGKKPLTEVWADDTHES-----------LDRT 113
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKK-AHIMEIQLNG 596
DEL ++++ + IR VI HT KK +ME ++ G
Sbjct: 114 LSVPDEGGDTDEL-IEALDTEEIADIR------VITHTVPGDTAGVPKKNPDVMETRVGG 166
Query: 597 GTIEDXVKWAXEHLEK--PIPVDSVFGQXEMIDCIGVTKGKDTR 722
GT+ D +++A + +E VF E D G+TKGK T+
Sbjct: 167 GTLADRLEFAADLIEDGGVHAFGDVFRAGEFTDAAGITKGKGTQ 210
>UniRef50_UPI00015BB2A1 Cluster: LSU ribosomal protein L3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L3P - Ignicoccus hospitalis KIN4/I
Length = 358
Score = 79.0 bits (186), Expect = 2e-13
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 11/229 (4%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS G P+KR+ +V++ P D KP+ A +GYK GMTHV+ DR
Sbjct: 9 PRRGSAGLRPRKRAASIVPRVRSWPSIDEVKPL---AFLGYKVGMTHVIMIDDREHVDTA 65
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPH-GLRALLTVWAEHMSEDCRXRFYKNWYXXXX 416
+EI VT+I TPPMV +G + P+ G AL VW + S+ + + +
Sbjct: 66 GQEIFVPVTVIETPPMVVLGARVYGYDPNRGRYALTEVW-RNPSDTIKEKLGEEVLRKYL 124
Query: 417 XXXXXXXXXWQDELG----------RKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKK 566
+ELG K ++ D +K++ V +++ +K
Sbjct: 125 LGMSKRLPHMVEELGPGKGFEFKVPEKELDVDPEKVV---GVGLIMSSIPFLAGGVSKKA 181
Query: 567 AHIMEIQLNGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
I+E+++ G +E +++A L + + V+ V + +D IGVTKGK
Sbjct: 182 PDILEVKVGGSPVE-ALEYAKGKLGQLVDVEEVIEAGKFVDVIGVTKGK 229
>UniRef50_Q59LS0 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 173
Score = 77.4 bits (182), Expect = 5e-13
Identities = 45/123 (36%), Positives = 62/123 (50%)
Frame = -3
Query: 713 LALGDTNAVNHFXLAKHRIDRDRFLQMFXGPFHXVLDGTTVKLDFHNVXXXXXXXXXXXX 534
+ GD+N +NHF L ++R++R+ F ++F GP + V DGTTV LDF V
Sbjct: 51 VTFGDSNDINHFILFENRVNRNFFFKVFFGPVNFVGDGTTVDLDFSQVSFLLRQWSLLDL 110
Query: 533 SVGNDSYNITVADHLLEIFFY*FASKLILPFLTGFSESLLLAFVPVFVEAXSTVFRHMLR 354
V DS N +V + F F + F F E LL F+PV VE+ S F +
Sbjct: 111 GVSQDSDNRSVLLDSGQFSFNLFGVSGV--FTRVFGEGFLLGFIPVLVESSSDFFTQVFS 168
Query: 353 PDS 345
PDS
Sbjct: 169 PDS 171
>UniRef50_A7DSZ4 Cluster: Ribosomal protein L3; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L3
- Candidatus Nitrosopumilus maritimus SCM1
Length = 331
Score = 76.2 bits (179), Expect = 1e-12
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 1/219 (0%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS+ + P+ R++ +++A P D +P + A G+KAG +V DR
Sbjct: 9 PRRGSLAYSPRVRAKSMEARIRAWPKLDSEEP-KILAHCGFKAGCVQIVSIDDREKVPNA 67
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRF-YKNWYXXXX 416
K++V T++ TPP++ +G+ G+ GL A V+AE + + KN
Sbjct: 68 GKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYAEDIPKSIAKEISLKN------ 121
Query: 417 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNG 596
+ E + EK KK+ +V + QKK +I E ++G
Sbjct: 122 ----------KQENALDNAEKSLKKIKEIFAIVAI----SPSAAGLEQKKPYIFEASVSG 167
Query: 597 GTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
G I E L K I +D +F +D +TKGK
Sbjct: 168 GDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGK 206
>UniRef50_Q0W1Y9 Cluster: 50S ribosomal protein L3P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L3P -
Uncultured methanogenic archaeon RC-I
Length = 337
Score = 72.9 bits (171), Expect = 1e-11
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVK--AXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSK 233
P GS+G+ P+ R+R + K++ A D P + +G+KAGM+H+V DRP S
Sbjct: 7 PRRGSLGYSPRVRARSQKPKMRNWAELGDQPK----IQGFVGFKAGMSHIVMVDDRPHSA 62
Query: 234 INKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSE-DCRXRFYKNWYXX 410
EI VTI+ P M G+ + +P+G + + W + + KN Y
Sbjct: 63 TEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGEAWISDLKMLESLTHLPKNGYK- 121
Query: 411 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQL 590
DE K E K ++ V+ V +++ + +K +ME ++
Sbjct: 122 ------------TDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIP--KKVPELMENRI 167
Query: 591 NGGTIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGKDTR 722
GG + ++A + K + + VF E++D +TKG T+
Sbjct: 168 AGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQ 211
>UniRef50_P60458 Cluster: 50S ribosomal protein L3P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L3P -
Nanoarchaeum equitans
Length = 321
Score = 63.7 bits (148), Expect = 6e-09
Identities = 50/218 (22%), Positives = 98/218 (44%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GSMGF+P+KR+ R ++K P + KP+ A YK GMTH + IN
Sbjct: 9 PRRGSMGFWPRKRASRIYPRIKTWPKIEEIKPL---AFAAYKVGMTHTI-------LNIN 58
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
+ + VT++ P ++ +G + L+ + +++ + + + K
Sbjct: 59 GERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQYVFRKIPK-------- 110
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
++++ ++ F + V++I TQ + + +K I +I + G
Sbjct: 111 ---LKNYNFEEK------KEQFLSKADNADEVKIIVSTQPWKI-KLKKTPEIFDIPIGGS 160
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+ +++A L K + ++ VF + + +D I VTKGK
Sbjct: 161 DVNKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGK 198
>UniRef50_Q97BX7 Cluster: 50S ribosomal protein L3P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L3P -
Thermoplasma volcanium
Length = 331
Score = 59.7 bits (138), Expect = 1e-07
Identities = 52/225 (23%), Positives = 94/225 (41%), Gaps = 1/225 (0%)
Frame = +3
Query: 57 HPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKI 236
H GSM +YP+ R++ ++++ P + PV + G+K GMTHV R S
Sbjct: 6 HSRRGSMAYYPRVRAKSIEPRIRSWP--EISGPVKVQGFAGFKVGMTHVEMVDYRKTSVT 63
Query: 237 NKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXX 416
+ I VT+I PP+ +G+ + G ++ Y+ W
Sbjct: 64 AGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVV---------------YEKWTQNLD 108
Query: 417 XXXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNG 596
++ E+ K + + Y +V ++A + KK I E+++ G
Sbjct: 109 KELFKKITTFK-EVKEKPVPE------TYADVRLIVATRNKDVPGIPSKKPEIFELRIGG 161
Query: 597 G-TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGKDTRCH 728
G ++++ ++A HL K I + + +D + VTKGK H
Sbjct: 162 GNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGH 206
>UniRef50_A3DNA4 Cluster: 50S ribosomal protein L3; n=1;
Staphylothermus marinus F1|Rep: 50S ribosomal protein L3
- Staphylothermus marinus (strain ATCC 43588 / DSM 3639
/ F1)
Length = 395
Score = 58.4 bits (135), Expect = 2e-07
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Frame = +3
Query: 453 ELGRKSIEKDFKKMIRYCNV-----VRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDXV 617
E G K +E ++K+ + +RVIA T L +KK I+EI++ GGT+ + +
Sbjct: 175 EYGFKFLENNWKEKLERLKAAELADIRVIASTIPVLSGIGKKKPEIIEIKIGGGTLSERI 234
Query: 618 KWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+A + L + VD VF + + ID IGVTKGK
Sbjct: 235 DYAEKLLGNYVTVDQVFREGQFIDIIGVTKGK 266
Score = 56.0 bits (129), Expect = 1e-06
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDD------------------PXKPVHLTAXIGYK 185
P HGS+G P+KR+ + ++++ P KPV L + YK
Sbjct: 9 PRHGSLGVRPRKRAAKIVPRIRSWPTQSWFDLLVEKLGDEAVNKGIAPKPV-LLGYVAYK 67
Query: 186 AGMTHVVREPDRPGSKINKKEIVEAVTIIXTPPMVCVGVVGHIXTP-HGLRALLTVW 353
AGM+H + DRP + + KEI VT++ PP++ +G+ G+ P HGL + VW
Sbjct: 68 AGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGLLSFGEVW 124
>UniRef50_A0RVX4 Cluster: 50S ribosomal protein L3; n=1; Cenarchaeum
symbiosum|Rep: 50S ribosomal protein L3 - Cenarchaeum
symbiosum
Length = 328
Score = 52.4 bits (120), Expect = 2e-05
Identities = 29/105 (27%), Positives = 53/105 (50%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P GS+ + P+ R+R +++ P + +P L A G+KAG +V DR +
Sbjct: 9 PRRGSLAYSPRGRARSMEARIRGWP-ERQGEP-RLLAHAGFKAGCIQIVSIDDREHTPNA 66
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSED 374
K++V T++ TPP+ +G+ G+ +G V+AE + +
Sbjct: 67 GKQLVSLGTVLVTPPLHVLGMRGYSKGHYGRHVKFDVFAEDLPRE 111
>UniRef50_Q3LWC1 Cluster: Ribosomal protein L3; n=1; Bigelowiella
natans|Rep: Ribosomal protein L3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 370
Score = 48.8 bits (111), Expect = 2e-04
Identities = 30/99 (30%), Positives = 47/99 (47%)
Frame = +3
Query: 54 QHPDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSK 233
+HP GS+GF PKKRS R K +++ K THV+R + SK
Sbjct: 7 EHPRIGSLGFLPKKRSNRIFPSSKTYKEIIHIYYPYISQFASLKVASTHVLRICNIVSSK 66
Query: 234 INKKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTV 350
+ I++ VT++ PP+ VG+ + + L L T+
Sbjct: 67 SYQNPIIDEVTLMECPPIEVVGLCAYALSSGHLVKLKTI 105
Score = 37.9 bits (84), Expect = 0.35
Identities = 21/77 (27%), Positives = 44/77 (57%)
Frame = +3
Query: 492 MIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDXVKWAXEHLEKPIPVDSVFG 671
+I++ + R + T +K +KK + E + GG+ + +++ + K I ++S+F
Sbjct: 136 IIKHSVIFRFLCCTFIKTNSMIKKK-YFFETDIIGGSPKMKLEFWLKLNNKKIYINSIFH 194
Query: 672 QXEMIDCIGVTKGKDTR 722
+ ++ID IG+TKG T+
Sbjct: 195 ENDIIDAIGITKGHGTK 211
>UniRef50_A6Q7D5 Cluster: Putative uncharacterized protein; n=1;
Sulfurovum sp. NBC37-1|Rep: Putative uncharacterized
protein - Sulfurovum sp. (strain NBC37-1)
Length = 135
Score = 33.9 bits (74), Expect = 5.6
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 444 WQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
WQD K I+KD+ + YC +R+ H +L ++ K HI+ + G
Sbjct: 29 WQDNSDAKYIQKDWNGAMLYCRQLRLAGHNDWRLPSIKELK-HILSTEPRDG 79
>UniRef50_Q69NC6 Cluster: Putative uncharacterized protein
OJ1742_G01.32; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1742_G01.32 - Oryza sativa subsp. japonica (Rice)
Length = 100
Score = 33.9 bits (74), Expect = 5.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 242 ERDRGGCHHHRXSSDGLCRCC 304
E DRG CHH+ S GLCR C
Sbjct: 36 EGDRGCCHHYLTGSPGLCRRC 56
>UniRef50_A7TI46 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 253
Score = 33.5 bits (73), Expect = 7.4
Identities = 21/77 (27%), Positives = 37/77 (48%)
Frame = +3
Query: 456 LGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDXVKWAXEH 635
L RKSIE + + IR+ V I +K++ +++ + E +L GT + A
Sbjct: 135 LARKSIEYNTYQSIRFKTVFPDIVEENIKVIEEKKNNQNEKEDELLAGTKKQEDAIANAA 194
Query: 636 LEKPIPVDSVFGQXEMI 686
EKPI ++ + + I
Sbjct: 195 KEKPISLEEILDPEDRI 211
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,318,947
Number of Sequences: 1657284
Number of extensions: 13365950
Number of successful extensions: 27518
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 26577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27495
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 80751996367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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