Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I17
(895 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 353 2e-97
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 353 2e-97
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 353 2e-97
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 344 1e-94
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 344 1e-94
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 203 2e-52
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 187 2e-47
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 353 bits (868), Expect = 2e-97
Identities = 156/218 (71%), Positives = 179/218 (82%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HGSM FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKIN
Sbjct: 20 PRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKIN 79
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
KKE+VEAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 80 KKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKK 139
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+ QRQKKAH+MEIQLNGG
Sbjct: 140 AFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGG 199
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+IED VKWA EHLEKPI V +VFGQ EMIDC+GVTKGK
Sbjct: 200 SIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 237
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 353 bits (868), Expect = 2e-97
Identities = 156/218 (71%), Positives = 179/218 (82%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HGSM FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKIN
Sbjct: 9 PRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKIN 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
KKE+VEAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 69 KKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKK 128
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+ QRQKKAH+MEIQLNGG
Sbjct: 129 AFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGG 188
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+IED VKWA EHLEKPI V +VFGQ EMIDC+GVTKGK
Sbjct: 189 SIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 226
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 353 bits (868), Expect = 2e-97
Identities = 156/218 (71%), Positives = 179/218 (82%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HGSM FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKIN
Sbjct: 9 PRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKIN 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXX 419
KKE+VEAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 69 KKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKK 128
Query: 420 XXXXXXXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGG 599
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+ QRQKKAH+MEIQLNGG
Sbjct: 129 AFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGG 188
Query: 600 TIEDXVKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
+IED VKWA EHLEKPI V +VFGQ EMIDC+GVTKGK
Sbjct: 189 SIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 226
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 344 bits (845), Expect = 1e-94
Identities = 152/213 (71%), Positives = 175/213 (82%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKINKKEIV 254
M FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 255 EAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXXXXXXX 434
EAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 435 XXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDX 614
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+ QRQKKAH+MEIQLNGG+IED
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 615 VKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
VKWA EHLEKPI V +VFGQ EMIDC+GVTKGK
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 213
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 344 bits (845), Expect = 1e-94
Identities = 152/213 (71%), Positives = 175/213 (82%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKINKKEIV 254
M FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 255 EAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWYXXXXXXXXXX 434
EAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 435 XXXWQDELGRKSIEKDFKKMIRYCNVVRVIAHTQMKLLXQRQKKAHIMEIQLNGGTIEDX 614
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+ QRQKKAH+MEIQLNGG+IED
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 615 VKWAXEHLEKPIPVDSVFGQXEMIDCIGVTKGK 713
VKWA EHLEKPI V +VFGQ EMIDC+GVTKGK
Sbjct: 181 VKWAREHLEKPIQVSNVFGQDEMIDCVGVTKGK 213
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 203 bits (496), Expect = 2e-52
Identities = 88/115 (76%), Positives = 98/115 (85%)
Frame = +3
Query: 60 PDHGSMGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKIN 239
P HGSM FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKIN
Sbjct: 9 PRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKIN 68
Query: 240 KKEIVEAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKNWY 404
KKE+VEAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKNWY
Sbjct: 69 KKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 187 bits (455), Expect = 2e-47
Identities = 82/108 (75%), Positives = 92/108 (85%)
Frame = +3
Query: 75 MGFYPKKRSRRHRGKVKAXPXDDPXKPVHLTAXIGYKAGMTHVVREPDRPGSKINKKEIV 254
M FYPKKRS RHRGKVKA P DD KPVHLT IGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 255 EAVTIIXTPPMVCVGVVGHIXTPHGLRALLTVWAEHMSEDCRXRFYKN 398
EAVT++ TPPM+ VG VG+I TP GLRAL+ VWA+H+SE+CR RFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,168,687
Number of Sequences: 53049
Number of extensions: 637975
Number of successful extensions: 1108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1071
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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