Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_I16
         (856 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    29   0.18 
AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical prote...    25   2.2  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.2  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    24   5.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   9.0  

>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = +1

Query: 325 GLRALLTVWAEHMSEDCRRRFYKNCMGFDLINQV 426
           G+R   ++WAE +  +CR+++ + C    L+N+V
Sbjct: 770 GIRYASSIWAESLKFECRKQWLRRCHR-PLVNRV 802


>AJ438610-5|CAD27477.1|  135|Anopheles gambiae hypothetical protein
           protein.
          Length = 135

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = -2

Query: 216 VRFSNHVGHTGLITDKS-SQMNRFARVVFRERLDLTTMTTGPLFGIESHRPMXGVLKIFC 40
           VR     G +G ++ +  +  + F+  + +++ D+T  TT   F    +R    +L IFC
Sbjct: 59  VRVRQLAGCSGYVSPRGGTNSDDFSPYIKQDKKDITFSTTQDNFPTPHNRITIVLLPIFC 118

Query: 39  A 37
           A
Sbjct: 119 A 119


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +3

Query: 594 TLWK-SNLTVVPSRTK*NGPXNIWRNLSLVDSVFXQDEMI 710
           ++WK   L ++P   K  G  + +R L LVD++    EM+
Sbjct: 508 SMWKIQKLVLIPKPGKPPGHPSAFRPLGLVDNLAKVQEMV 547


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = +1

Query: 370 DCRRRFYKNCMGFDLINQVQMQEEGFH 450
           +  ++ Y   MG DL++ V + +EG +
Sbjct: 35  EAMKQLYAQIMGHDLVDSVSVPKEGLN 61


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 9.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 300 CWIH*DPSWTTRSVDCLGGAYV*RL 374
           C  + D SW++  VDC    Y  RL
Sbjct: 762 CTCYHDQSWSSNVVDCSRAGYDDRL 786


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,420
Number of Sequences: 2352
Number of extensions: 16572
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90959220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)