Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I16
(856 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 199 2e-51
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 199 2e-51
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 199 2e-51
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 111 6e-25
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 111 6e-25
U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeri... 29 3.2
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 28 9.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 196
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 197 AREHLEKQV 205
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 196
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 197 AREHLEKQV 205
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 562
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 687 VFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
V +MID IGV +G G KGVTS P HKGL K A
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 204
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 196
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 197 AREHLEKQV 205
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 52.4 bits (120), Expect = 4e-07
Identities = 22/32 (68%), Positives = 26/32 (81%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 562
WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = +3
Query: 687 VFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
V +MID IGV +G G KGVTS P HKGL K A
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 204
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 199 bits (486), Expect = 2e-51
Identities = 84/116 (72%), Positives = 100/116 (86%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 228
F P HG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGS
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGS 65
Query: 229 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKN 396
K+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY N
Sbjct: 66 KVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYSN 121
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 137 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 196
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 197 AREHLEKQV 205
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 207 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 252
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 154
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 111 bits (267), Expect = 6e-25
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +2
Query: 467 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 646
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 647 AXEHLEKPI 673
A EHLEK +
Sbjct: 99 AREHLEKQV 107
Score = 54.4 bits (125), Expect = 1e-07
Identities = 27/46 (58%), Positives = 29/46 (63%)
Frame = +3
Query: 678 VDSVFXQDEMIDCIGVXKGXGXKGVTSXGXQXXYPXXXHKGLXKXA 815
VD+VF QDEMID IGV +G G KGVTS P HKGL K A
Sbjct: 109 VDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVA 154
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/29 (65%), Positives = 22/29 (75%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPK 135
F P HG MGF PKKRSR +RG++KAF K
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>U00058-2|AAL02528.2| 832|Caenorhabditis elegans Hypothetical
protein W03A5.1 protein.
Length = 832
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Frame = +3
Query: 582 KRRLTLWKSNLTVVPSRTK*NGPXNIWRNLSL------VDSVFXQD-EMIDCIGVXKGXG 740
K RL L K +V S K GP W N+ L ++S+F D + IDC G G
Sbjct: 473 KNRLNLSKEEKELVSSYMKNQGPQKKWENMPLHETSIRINSLFYVDGKKIDCGTDQIGKG 532
Query: 741 XKGVTSXG 764
G G
Sbjct: 533 AFGTVKKG 540
>Z74473-3|CAA98948.1| 364|Caenorhabditis elegans Hypothetical
protein F56H9.3 protein.
Length = 364
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 358 HMSEDCRRRFYKNCMGFDLINQVQMQEEGF 447
H+S + YKN + FD IN+V+M E F
Sbjct: 91 HLSVGRENKSYKNPLSFDHINEVRMFTENF 120
>AY008131-1|AAG32084.1| 364|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 364
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 358 HMSEDCRRRFYKNCMGFDLINQVQMQEEGF 447
H+S + YKN + FD IN+V+M E F
Sbjct: 91 HLSVGRENKSYKNPLSFDHINEVRMFTENF 120
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 27.9 bits (59), Expect = 9.7
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -3
Query: 725 DTNAVNHFILXKHRIDQG*VSPDVL 651
D+N +NHF + KH+++Q + P+ +
Sbjct: 467 DSNVINHFAVTKHQMEQLDLRPETV 491
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,163,020
Number of Sequences: 27780
Number of extensions: 384418
Number of successful extensions: 911
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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