Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_I15
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...    25   3.8  
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    25   3.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   6.7  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 15/54 (27%), Positives = 22/54 (40%)
 Frame = -2

Query: 673 HIPA*QTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPFEILVGIER 512
           H+   +TRPY  G        V  + P       M  +L+ S     I+VG +R
Sbjct: 189 HVYCTETRPYNQGARLTAYELVHDKLPATLVTDSMVAALLNSRKIDAIIVGADR 242


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 255 MGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 359
           M +NT ++ A+  HL NNP  ++ L  +K  V  V
Sbjct: 102 MFQNTTLQ-AVLSHLRNNPITDEHLAKVKRGVEIV 135


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 197 GLATDAADPYLATWLQYRAHGKKHNDAQSHQR 292
           G ATD  +  LA   Q + H  +H   Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,651
Number of Sequences: 2352
Number of extensions: 18931
Number of successful extensions: 50
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)