Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I09
(849 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 149 5e-37
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 4e-05
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 43 6e-05
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 42 1e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 42 1e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 38 0.001
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 38 0.001
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.002
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 37 0.003
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 36 0.007
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 35 0.013
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 35 0.017
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 32 0.089
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.16
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.27
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 1.1
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.5
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 28 1.9
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 27 4.4
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 4.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 4.4
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 27 4.4
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 149 bits (361), Expect = 5e-37
Identities = 68/134 (50%), Positives = 95/134 (70%)
Frame = +3
Query: 210 AVPTESCEFGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVS 389
A P ++ + +P+Y+ LC +GG+L+ G TH+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTI 68
Query: 390 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASA 569
+ +EG+RGL G PT IGYS+QG K+GFYE+FK Y+ ++ + A+ YRT +YLAASA
Sbjct: 69 LSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASA 128
Query: 570 SAEFIADIALSPME 611
SAE +ADI L PME
Sbjct: 129 SAELLADIMLCPME 142
Score = 92.7 bits (220), Expect = 6e-20
Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Frame = +1
Query: 604 PWKAAKVRIQTM-PGFASTLREAWPKMVXNEGYGTFYKGLVPLWGXQIPYTMXXLACFER 780
P +A KVR+QT P FA+T REAW K+V NEG+GT Y+GL PLW QIPYTM A FER
Sbjct: 140 PMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIPYTMMKFASFER 199
Query: 781 TLELLYXYV 807
+E LY Y+
Sbjct: 200 IVEALYTYI 208
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 43.6 bits (98), Expect = 4e-05
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Frame = +3
Query: 267 VGGVLSRGLTHTAVV----PLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGV 407
V G LS GL V P +++K R Q+ D K YK+V F + R EG+
Sbjct: 24 VSGFLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGI 83
Query: 408 RGLAKGWAPTFIGYSMQGLCKFGFYE-VFKVAYAGMLDD 521
RGL +G ++ C+ GFYE + + LDD
Sbjct: 84 RGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +3
Query: 312 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 425
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 42.7 bits (96), Expect = 6e-05
Identities = 27/78 (34%), Positives = 40/78 (51%)
Frame = +3
Query: 264 GVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 443
G G + LT+ P+ +VK R+ Y N GF ++ EG+RG G+AP+ +
Sbjct: 106 GFAGCIVAALTN----PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLL 161
Query: 444 GYSMQGLCKFGFYEVFKV 497
G S QG +F YE K+
Sbjct: 162 GVS-QGALQFMAYEKLKL 178
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 312 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 485
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 41.5 bits (93), Expect = 1e-04
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 216 PTESCEFGSPKYFALCGVGGVLSRGLTHTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSV 392
P+ S + P + + G++S G T TA+ P D++K R+Q++ YKN ++ K+
Sbjct: 198 PSSSVQGTVPHRNIVNVMSGLIS-GATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVY 256
Query: 393 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 485
EG RG G+ + S+ + YE
Sbjct: 257 ANEGFRGFLDGFFLRVLRKSISSTITWSVYE 287
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 41.5 bits (93), Expect = 1e-04
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Frame = +3
Query: 291 LTHTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 455
+T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G
Sbjct: 175 ITSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG- 233
Query: 456 QGLCKFGFYEVFKVAYA 506
+ ++ YE FK A A
Sbjct: 234 ESTLQWVLYEKFKHAVA 250
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +3
Query: 270 GGVLSRGLTHTAVVPLDLVKCRLQVDAE-----KYKNVVNGFKVSVREEGVRGLAKGWAP 434
G +++ + P ++V+ RL+ KY ++ FK+ E+G+ GL G
Sbjct: 278 GAGIAKFMAAGIAYPHEVVRTRLRQSPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTA 337
Query: 435 TFIGYSMQGLCKFGFYEV 488
+ FG YEV
Sbjct: 338 HLLRVVPNACILFGSYEV 355
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +3
Query: 249 YFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEK 356
+F GV G+L A PLD+VK RLQ D K
Sbjct: 51 HFIAGGVAGMLGA----IATAPLDVVKTRLQSDFYK 82
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Frame = +3
Query: 237 GSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAE--------KYKNVVNGFKVSV 392
G K+FA G + + V LD + RL DA+ ++ +V+ ++ +
Sbjct: 127 GYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Query: 393 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK-VAYAGMLD 518
R +G+RGL +G+ P+ +G + FG Y+ K V G L+
Sbjct: 187 RSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLE 229
Score = 36.3 bits (80), Expect = 0.005
Identities = 33/115 (28%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Frame = +3
Query: 186 TGGMAASAAVPTES---CEFGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAE- 353
T AA+A+ P + E + +F +GGV S ++ TA P++ VK +Q E
Sbjct: 3 TSSAAAAASTPVNANTITETKNSTFFFDFMMGGV-SAAVSKTAAAPIERVKLLIQNQDEM 61
Query: 354 --------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 494
+YK + FK + EEGV L +G + Y F F + FK
Sbjct: 62 IRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFK 116
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 38.3 bits (85), Expect = 0.001
Identities = 25/91 (27%), Positives = 44/91 (48%)
Frame = +3
Query: 222 ESCEFGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREE 401
+S EF P + + G +S + + P D++K R+Q+ + V FK +V++E
Sbjct: 8 DSQEFAQPVWHYT--LAGGISSVICRFMIAPFDVIKIRMQITQSSLRPV---FKETVQKE 62
Query: 402 GVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 494
GVR L +G + Y + G +F + K
Sbjct: 63 GVRALWRGNVVAELLYLVYGAAEFVAFSKLK 93
Score = 29.9 bits (64), Expect = 0.48
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 SPKYFALCG-VGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGL 416
SP AL + GV++ + + P+D V LQ YK+ + F R G++GL
Sbjct: 187 SPLGLALSSTLSGVIAGAGSKAIMFPVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGL 246
Query: 417 AKG 425
+G
Sbjct: 247 YRG 249
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 37.9 bits (84), Expect = 0.002
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
Frame = +3
Query: 222 ESCEFGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVS 389
E GSP Y L + G S L H+ + P+D +K R+Q V N+VN
Sbjct: 11 EGLPIGSPMYAHL--LAGAFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKI 68
Query: 390 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK 494
EGV L +G + +G F E FK
Sbjct: 69 SSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFK 103
Score = 30.7 bits (66), Expect = 0.27
Identities = 18/72 (25%), Positives = 34/72 (47%)
Frame = +3
Query: 240 SPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLA 419
SP + G + ++ + P D++K R+Q+ + KYK+ ++ R EG+
Sbjct: 109 SPDRPLASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFY 168
Query: 420 KGWAPTFIGYSM 455
+ PT I S+
Sbjct: 169 ISY-PTCIAMSI 179
Score = 27.1 bits (57), Expect = 3.4
Identities = 18/79 (22%), Positives = 27/79 (34%)
Frame = +1
Query: 604 PWKAAKVRIQTMPGFASTLREAWPKMVXNEGYGTFYKGLVPLWGXQIPYTMXXLACFERT 783
P+ K R+Q + + NEG G FY IP+T +A ++
Sbjct: 133 PFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTC 192
Query: 784 LELLYXYVVPXPREQXTXG 840
+ L V P G
Sbjct: 193 MSFLNPNAVYDPTSHIISG 211
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 37.1 bits (82), Expect = 0.003
Identities = 26/87 (29%), Positives = 38/87 (43%)
Frame = +3
Query: 234 FGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRG 413
FG+PK G LS +T + PLD++K ++ + E Y+ VV +E G+ G
Sbjct: 168 FGAPK-------GAALSGAITAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFG 217
Query: 414 LAKGWAPTFIGYSMQGLCKFGFYEVFK 494
KG S+ G YE K
Sbjct: 218 FEKGLGLRVFASSLGLSIYLGTYEHVK 244
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 35.9 bits (79), Expect = 0.007
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
Frame = +3
Query: 273 GVLSRGLTHTAVVPLDLVKCRLQVDAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPT 437
G LS T V PL++++ RLQ Y ++ F + + EG RGL KG +P
Sbjct: 342 GALSGSTGATIVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPN 401
Query: 438 FIGYSMQGLCKFGFYE 485
+ + + YE
Sbjct: 402 LLKVAPSVAISYLVYE 417
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 35.1 bits (77), Expect = 0.013
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 276 VLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM 455
++S +++ PLD +K R Q + + + F+ +V+ EG++GL +G I ++
Sbjct: 25 LVSSAISNVIGYPLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATL 82
Query: 456 QGLCKFGFYEVFKVAYA 506
F Y+ K+ +A
Sbjct: 83 SRSVSFTVYDSLKLTFA 99
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 34.7 bits (76), Expect = 0.017
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 12/84 (14%)
Frame = +3
Query: 288 GLTHTAVV-PLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWA 431
GL + VV PLD+VK R Q Y KN V+ G S+R EG+ GL +G
Sbjct: 16 GLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVG 75
Query: 432 PTFIGYSMQGLCKFGFYEVFKVAY 503
P +GY F YE KV +
Sbjct: 76 PMMLGYLPSWSIYFVVYEKCKVLF 99
Score = 29.9 bits (64), Expect = 0.48
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 544 PSCTWRR----LRRRNSSPTSPCRPWKAAKVRIQTMPGFASTLREAWPKMVXNEGYGTFY 711
PS WR L+RR + +SP + P + +T +A+ K+ EG FY
Sbjct: 192 PSVKWRMPRFWLKRRTNVKSSPSQHPVNPPTGPACSPAYNNTF-DAFRKIYKYEGLAAFY 250
Query: 712 KGLVP 726
+GL P
Sbjct: 251 RGLFP 255
Score = 29.5 bits (63), Expect = 0.63
Identities = 21/72 (29%), Positives = 31/72 (43%)
Frame = +3
Query: 357 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 536
Y N + F+ + EG+ +G P+ G G+ +F YE FK LDD
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK----SFLDDFFGKK 284
Query: 537 YRTFVYLAASAS 572
+ LAA+ S
Sbjct: 285 SNFHIVLAATLS 296
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 32.3 bits (70), Expect = 0.089
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +3
Query: 243 PKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGL 416
P FA V G+ S LT + PLD+VK R+Q+ K Y + K V+ EG L
Sbjct: 9 PVTFAAGAVAGI-SEVLT---LYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRL 64
Query: 417 AKGWAPTFIGYSMQGLCKFGFYEVF 491
+G P + + + KF + +
Sbjct: 65 YRGILPPILMEAPKRALKFASNDTY 89
Score = 30.3 bits (65), Expect = 0.36
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
Frame = +1
Query: 604 PWKAAKVRIQTMPGFASTLRE---AWPKMVX---NEGYGTFYKGLVP 726
P+ K RIQT+P A + + A+P +V EG+ YKG VP
Sbjct: 219 PFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGFVP 265
Score = 25.8 bits (54), Expect = 7.8
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +3
Query: 267 VGGVLSRGLTHTAVVPLDLVKCRLQV------DAEKYKNVVNGFKVSVREEGVRGLAKGW 428
+GG+ L+ P D++K R+Q KY REEG L KG+
Sbjct: 208 IGGIFGTFLS----TPFDVIKSRIQTVPRIAGQVPKYNWAYPALVTVAREEGFTALYKGF 263
Query: 429 AP 434
P
Sbjct: 264 VP 265
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +3
Query: 303 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 470
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 471 FGFYE 485
F YE
Sbjct: 289 FYVYE 293
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 601 RPWKAAKVRIQTMPGFASTLREAWP---KMVXNEGYGTFYKGLV-PLWG 735
+P+ KVR+Q+ + A K+ NEG FYKG V PL G
Sbjct: 36 QPFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGLAAFYKGTVLPLLG 84
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 30.7 bits (66), Expect = 0.27
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +3
Query: 252 FALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 428
+++CG+ + T PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 86 YSICGMTAEVVSSFVWT---PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 309 VPLDLVKCRLQVDAEKYK 362
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -3
Query: 463 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 365
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 1.9
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Frame = +3
Query: 186 TGGMAASAAVPTESCEFGSPKYFALCGVGGVLSRGLTHTAVVPLDLVKCRLQVDAEKYKN 365
T G+ A +V E K + C VG V+ T V PLD+VK RLQ ++
Sbjct: 7 TEGVEADLSVNAEPDVKPIAKMLSAC-VGSVI----TTLTVTPLDVVKTRLQSES----- 56
Query: 366 VVNGFKVSVREEGVRGLAKGW-APTFIGYSMQGLCKFGFYEVFKVAYAGMLDDET 527
++ + + + L KG AP +G + GL + +E + + G++ T
Sbjct: 57 -ISQYSSTQPISSAKILGKGRPAPKPLGGPVSGLYQIARHEGVRSLWRGLVPSLT 110
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +3
Query: 258 LCGVGGVLSRGLTHTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAK 422
L G G++ + LT P D+++ R QV+ YKN+ + + EG+ G +
Sbjct: 232 LGGFTGIIGQTLTF----PADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFR 287
Query: 423 GWAPTFI 443
G++ +
Sbjct: 288 GYSSNML 294
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 270 GGVLSRGLTHTAVVPLDLVKCRLQVDAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIG 446
GGV + ++ TAV PL+ +K QV K Y ++ + EG+ G +G +
Sbjct: 27 GGVAAT-VSRTAVSPLERMKIIFQVQNNKEYTSLTSTLVKIWNREGLIGFFRGNGTNCLR 85
Query: 447 YSMQGLCKFGFYEVFK 494
G +F + + K
Sbjct: 86 AFPYGAVQFATFNMLK 101
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 393 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 485
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 4.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 372 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 479
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 190 VAWRRLLRYPRSPVN---LDRLNISLFAELVVFCH 285
+AW+ +YP P+ D ++L+AEL++ H
Sbjct: 302 IAWKYFYQYPAPPIGNDIFDLPTLNLYAELLLLDH 336
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,226,456
Number of Sequences: 5004
Number of extensions: 61426
Number of successful extensions: 203
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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