Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I07
(862 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 3e-07
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 50 2e-06
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 49 4e-06
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 49 6e-06
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 7e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 48 1e-05
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 45 9e-05
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 44 1e-04
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 43 4e-04
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 42 6e-04
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 42 9e-04
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 9e-04
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 42 9e-04
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.001
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 40 0.003
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 39 0.005
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 36 0.032
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 36 0.032
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.074
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 35 0.074
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 34 0.13
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.17
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 33 0.23
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 33 0.30
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.38
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 32 0.52
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 32 0.69
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 31 1.6
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.1
SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39) 29 3.7
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 4.9
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 4.9
SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 29 4.9
SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019) 29 6.4
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 29 6.4
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 53.2 bits (122), Expect = 3e-07
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGD--YALRAR--VSNNGSVSWIKRLDISTPISM 493
G S + ++LW+PD+ L N A ++A Y +A+ VS+ G W+ ++T +
Sbjct: 133 GISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLNMWLAPTILTTSCKI 192
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+ ++P D Q+CT KFGS +++ +D
Sbjct: 193 NVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATT---AGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDHWPN 514
+ +W PD+ LLN T AG ++ V N G W + + SM L WP
Sbjct: 149 KEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVENTGKCVWSGPVTFTFTCSMALSRWPF 208
Query: 515 DMQTCTFKFGSXMHNSDXM 571
D QTC KFGS + S+ M
Sbjct: 209 DQQTCAMKFGSLSYGSNLM 227
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKRLDISTPISMQLDH 505
++ +R+W+PDV+L N A+T +L ++ N GS +W+ I + + +
Sbjct: 108 IAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAPAIIKSECKIDVRF 167
Query: 506 WPNDMQTCTFKFGSXMHNSDXMD 574
+P D+Q+C FGS H+ +D
Sbjct: 168 FPFDVQSCELTFGSWTHDGLKID 190
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 48.8 bits (111), Expect = 6e-06
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQL 499
G + S+ +W PD+ +LN+A + +R +++ G V W+ L + T M +
Sbjct: 61 GIKQMTLRSKLIWTPDISVLNSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDI 120
Query: 500 DHWPNDMQTCTFKFGSXMHNSDXMD 574
H+P D Q C +FGS + MD
Sbjct: 121 AHFPFDNQACELRFGSWSTSLRYMD 145
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 48.4 bits (110), Expect = 7e-06
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYALRARV------SNNGSVSWIKRLDISTPISMQLDH 505
V +W+PD++L N A+T +L ++ S++GS +W+ I T + +
Sbjct: 50 VEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVILSSDGSAAWLSPAIIKTECKVDVRL 109
Query: 506 WPNDMQTCTFKFGSXMHNSDXMD 574
+P D+Q C KFGS H+ +D
Sbjct: 110 FPFDVQYCDLKFGSWTHDGLKID 132
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 48.0 bits (109), Expect = 1e-05
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSVSWIKRLDISTPISMQLDHWP 511
VS ++W PD+VL N A A+T G ++ R VS++G W+ + S+ ++++ ++P
Sbjct: 60 VSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKNMWLAPVIFSSSCTIKIKYFP 119
Query: 512 NDMQTCTFKFGSXMHNSDXMD 574
D Q C+ KFGS + +D
Sbjct: 120 FDDQYCSLKFGSWTFDGFHLD 140
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSNNGSVSWIKRLDISTPISM 493
G T + ++ +W PD+VL ++A + Y +S +GS +W + +
Sbjct: 63 GVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISKDGSSAWFSPASFRSTCKI 122
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+ ++P D QTC KFGS + +D
Sbjct: 123 DVTYFPFDEQTCYMKFGSWTYTIADVD 149
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAAT----TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
LW+PD+ L N A + + + + +V+ +G+ +W+ +T + + ++P D Q
Sbjct: 73 LWKPDIYLYNNADSGYDGSLYGFTAKIKVNYSGTNTWLAPKIFTTSCKINVKYFPFDQQE 132
Query: 527 CTFKFGSXMHNSDXMD 574
C KFGS ++++ +D
Sbjct: 133 CRLKFGSWTYDANSVD 148
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 44.0 bits (99), Expect = 2e-04
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLN--AAATTAGDYAL--RARVSNNGSVSWIKRLDISTPISM 493
G ++ V+ +W+PD+VL + T Y RA + +NG W +I + ++
Sbjct: 82 GLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMHNGYTEWFAPTEIHSICAI 141
Query: 494 QLDHWPNDMQTCTFKFGSXMHN 559
+ ++P D Q C KFGS ++
Sbjct: 142 DITYFPFDEQFCKMKFGSWSYS 163
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Frame = +2
Query: 347 SSERLWRPDVVLLNAAATT---AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDHW 508
S + +W PDV L+N A + AG + V G V W+ ++ +++ +W
Sbjct: 23 SPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGGKVEWVAPASFTSDCKLRVRYW 82
Query: 509 PNDMQTCTFKFGSXMHNSDXMDFVIDXRNIHVCSSH 616
P D Q CT F S + D + +I+ + + H
Sbjct: 83 PIDDQFCTLTFSSWTY--DDQEIIIETDDSELTRDH 116
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/82 (23%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISM 493
G + V +W PD+VL N + ++G+ + + + ++G+V W+ + + + +
Sbjct: 233 GMKSIKVDPSCVWVPDIVLYNNVDSDSSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKI 292
Query: 494 QLDHWPNDMQTCTFKFGSXMHN 559
+ ++P D Q C +FGS ++
Sbjct: 293 DITNFPLDEQFCKLEFGSWAYD 314
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 41.9 bits (94), Expect = 6e-04
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 12/99 (12%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAA----ATTAGD--------YALRARVSNNGSVSWIKRL 469
G S VS +R W PD++L N+ + D Y + + +NG SW+
Sbjct: 39 GVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKYKTQIEIRSNGYNSWLSPA 98
Query: 470 DISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFVID 586
+ + ++P D Q CT +FGS ++ +D ID
Sbjct: 99 MFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAA--ATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
LW+PD+VL N Y +V + G + W + T + + ++P D QT
Sbjct: 116 LWKPDMVLYNNVNDEDRGEQYLFNTKVIIYSTGDIEWYSPNILKTHCKIDIQYFPFDTQT 175
Query: 527 CTFKFGSXMHNSDXMD 574
C FGS +N +D
Sbjct: 176 CKLTFGSWTYNGLKID 191
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Frame = +2
Query: 356 RLWRPDVVLLNAA-ATTAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
R+WRPD++L N A T G + + ++ +GS W+ + + + ++P D Q
Sbjct: 103 RVWRPDLILYNNADRDTDGALDRFYTKVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQ 162
Query: 524 TCTFKFGSXMHNSDXMDFV 580
+C KFGS ++ ++ V
Sbjct: 163 SCILKFGSWTYDGLRLNIV 181
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSVSWIKRLDISTPISM 493
G ++ + +W+PD++L N G D+ R R++++G W + T ++
Sbjct: 16 GVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMTYWSMPFVVVTLCTI 75
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMDFVIDXR 592
+ +P D Q C FGS H+ + ++ + D +
Sbjct: 76 NVSDFPFDTQQCKLTFGSWQHDGNEINLINDRK 108
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +2
Query: 356 RLWRPDVVLLNAAATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
++W PD++L N A T AG Y S++G+ W ++ ++ + ++P D Q
Sbjct: 153 KVWIPDIILYNNADETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQ 212
Query: 524 TCTFKFGS 547
C+ KFGS
Sbjct: 213 NCSLKFGS 220
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +2
Query: 347 SSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDHW 508
S + +W PDV L+N AG L V +G V WI + ++ ++++ W
Sbjct: 424 SPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGKVDWIAQASFTSTCNLRVRFW 483
Query: 509 PNDMQTCTFKFGSXMHNSDXMDFVID 586
P D Q CT F S + + +D
Sbjct: 484 PMDDQFCTLTFSSWTYTESEIALKMD 509
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 40.3 bits (90), Expect = 0.002
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Frame = +2
Query: 314 QGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR----ARVSNNGSVSWIKRLDI 475
Q ++G +V ER +W PDVVLLN A ++ + V +NG V W+ + +
Sbjct: 52 QSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNEGNPVLVESNGVVRWLAPVVL 111
Query: 476 STPISMQLDHWPNDMQTCTFKFGS 547
+ M + +P D Q C KF S
Sbjct: 112 KSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/65 (24%), Positives = 33/65 (50%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCT 532
+++W+PD + N ++T + + G V + +R+ + M L ++P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 533 FKFGS 547
F S
Sbjct: 86 ISFES 90
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = +2
Query: 413 YALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+ + +VS+ G W+ ++T + + ++P D Q+CT KFGS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 38.3 bits (85), Expect = 0.008
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +2
Query: 356 RLWRPDVVLLNA--AATTAGDYALRARVS--NNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
++WRPD NA ++ TA D + + ++ NG V + + I+ M+L +P D Q
Sbjct: 34 KMWRPDPFCYNARESSLTASDDDINSMMTIHPNGDVVYSRMTIITAECEMKLHDFPMDEQ 93
Query: 524 TCTFKFGSXMHNS 562
C K GS +++
Sbjct: 94 QCHLKLGSYSYST 106
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 37.9 bits (84), Expect = 0.010
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISMQLDHWPND 517
+++W+PD L N AG D +L RV NG+V++ R+ + M+ ++P D
Sbjct: 135 DKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKMEFRNFPMD 194
Query: 518 MQTCTFKFGSXMHNSDXMDFV 580
Q+C S D + ++
Sbjct: 195 RQSCPVTISSYFFPEDEIYYI 215
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGS 547
V+N G V W + S+++ +WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 36.3 bits (80), Expect = 0.032
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGS 547
V+N G V W + S+++ +WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 35.1 bits (77), Expect = 0.074
Identities = 17/65 (26%), Positives = 31/65 (47%)
Frame = +2
Query: 386 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSD 565
N A T + + ++ N+G W I + ++ + ++P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 566 XMDFV 580
++ V
Sbjct: 65 EVNIV 69
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 35.1 bits (77), Expect = 0.074
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAA----TTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
+W P V++ N A + R V ++G+V W+ I + + + ++P D Q
Sbjct: 576 IWTPPVIIYNQAGDLGESITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQL 635
Query: 527 CTFKFGSXMHNSDXMD 574
C FGS ++ +D
Sbjct: 636 CKIIFGSWHYDVSKLD 651
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 35.1 bits (77), Expect = 0.074
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +2
Query: 422 RARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDF 577
+A V +NG W +I + + + +P D Q C KFGS + ++F
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +2
Query: 347 SSERLWRPDVVLLNAAATTA----GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPN 514
++ W+PD NA + D R + +G + + + + I M L +P
Sbjct: 292 AASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGKIFYSRGVSIVASCEMDLHDFPL 351
Query: 515 DMQTCTFKFGS 547
D Q C KFGS
Sbjct: 352 DTQNCYLKFGS 362
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 33.9 bits (74), Expect = 0.17
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +2
Query: 440 NGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
NG W+ + +++ + + ++P D Q C+ KFGS ++ + +D V
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLV 68
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+ + G + W + T + + ++P D QTC FGS +N +D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 33.1 bits (72), Expect = 0.30
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 437 NNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+NG+ W + + +++ +P D QTC KFGS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 29.1 bits (62), Expect(2) = 0.38
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 503 HWPNDMQTCTFKFGSXMHNSDXMD 574
++P D Q C KFGS H+S +D
Sbjct: 1508 YFPFDEQKCLLKFGSWTHDSSRLD 1531
Score = 22.2 bits (45), Expect(2) = 0.38
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 344 VSSERLWRPDVVLLN 388
V+ E +W PD+V+ N
Sbjct: 1492 VAPEEVWVPDIVIYN 1506
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 32.3 bits (70), Expect = 0.52
Identities = 12/50 (24%), Positives = 27/50 (54%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
+ ++G+ SW +I + + + ++P D Q+C FGS + + ++ V
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLV 59
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +2
Query: 437 NNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFVI 583
N G++ W + + + + ++P D Q C+ FGS + S+ + I
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDI 60
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 527 CTFKFGS 547
C FGS
Sbjct: 77 CNLVFGS 83
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
LW PD NA + + D + + ++ +GS+ + + I M L +P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 527 CTFKFGS 547
C FGS
Sbjct: 204 CNLVFGS 210
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 524 TCTFKFGSXMHNSDXMDFVIDXRN 595
C S + + + + + RN
Sbjct: 92 VCEMMLESYGYQATDVYYRWNSRN 115
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 30.3 bits (65), Expect = 2.1
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 538
+W PD NA + + NG + + R + M L ++P D+Q C+
Sbjct: 151 IWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQMDLFNFPLDVQRCSLV 210
Query: 539 FGSXMHNSDXMDF 577
S + +DF
Sbjct: 211 LESFAYTGRQIDF 223
>SB_16934| Best HMM Match : Ldl_recept_b (HMM E-Value=1.7e-39)
Length = 407
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +1
Query: 250 STVRILADLQMNWIDKRLSWNAGGMGLQHLAGVLGTLVEA*RGTA 384
S + I DL ++W +RL W G+G + G+ GT A GT+
Sbjct: 133 SNLGIPEDLALDWKGRRLFWTDPGLGTISVIGLDGTGRRALIGTS 177
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 335 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 445
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTC 529
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +2
Query: 431 VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+S++G+ +W + + S+ + +P D Q CT FGS ++ +D
Sbjct: 28 LSSDGTNTWYAPSILRSRCSIDITFFPFDDQRCTLHFGSWTYDGLRVD 75
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 243 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 139
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQ 496
G +++ S +LW PD+ L N A + V+++GS+ W + ++
Sbjct: 294 GIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSDGSIGWYYPTIFKSSCTID 353
Query: 497 LDHWPNDMQ 523
+ ++P D Q
Sbjct: 354 VTYFPFDDQ 362
>SB_23567| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00019)
Length = 653
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 407 GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
G RA +++ G V + IST + + +P D TC + G N+ ++ +
Sbjct: 332 GSLEFRAIITHEGLVKIFQPTSISTTCEVNIAFYPFDEHTCFIEIGPWSMNTAAVNVI 389
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFK 538
R+ NG++ + RL +++ M L ++P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 401 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWP 511
T DY+L RVS+NG S + ++ ++ + +H P
Sbjct: 4841 TTKDYSLEVRVSDNGVTSRVTVAVVTVHVTAENEHTP 4877
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,921,706
Number of Sequences: 59808
Number of extensions: 483662
Number of successful extensions: 1242
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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