Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I07
(862 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 49 5e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 5e-08
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 47 2e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 6e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 8e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 1e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 1e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 2e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 36 6e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 6e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 35 8e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 34 0.001
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 34 0.001
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 34 0.001
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 34 0.002
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 26 0.51
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 26 0.51
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.8
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 4.8
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 6.3
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 8.4
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 52.4 bits (120), Expect = 5e-09
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
V S+ +WRPD+VL N A A +A + + G V W + + ++++P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 521 QTCTFKFGSXMHNSDXMDFVIDXRNIHVCSSHRAXDV 631
QTC KFGS ++ F +D R++ S DV
Sbjct: 165 QTCVLKFGSWTYDG----FKVDLRHMDEKSGSNVVDV 197
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 51.6 bits (118), Expect = 9e-09
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + ++P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
QTC KFGS N D + +
Sbjct: 163 QTCIMKFGSWTFNGDQVSLAL 183
Score = 23.8 bits (49), Expect = 2.1
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 193 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 339
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 1/97 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
V S+ +WRPD+VL N A A +A ++ G V W + + ++++P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 521 QTCTFKFGSXMHNSDXMDFVIDXRNIHVCSSHRAXDV 631
QTC KFGS ++ F +D R+I D+
Sbjct: 161 QTCVMKFGSWTYDG----FQVDLRHIDEIRGKNVVDI 193
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 49.2 bits (112), Expect = 5e-08
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDHWP 511
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 512 NDMQTCTFKFGSXMHNSDXMDFVIDXRNIHVCSSHRAXDV 631
D+QTC K GS ++ F +D R++ S DV
Sbjct: 162 YDVQTCVLKLGSWTYDG----FKVDLRHMDEKSGSNVVDV 197
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 49.2 bits (112), Expect = 5e-08
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 493
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMD 574
++++P D Q+C KFGS +N +D
Sbjct: 161 NVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 47.6 bits (108), Expect = 1e-07
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 320 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 493
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMD 574
+ ++P D QTC KFGS ++ +D
Sbjct: 148 DVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.2 bits (107), Expect = 2e-07
Identities = 23/90 (25%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPN 514
V S+ +W PD+ + N+ T G V ++GSVS + + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 515 DMQTCTFKFGSXMHNSDXMDFVIDXRNIHV 604
D C FGS +H+ + ++ +D + H+
Sbjct: 179 DTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 142 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 306
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 307 WNAGGMG 327
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 191 QHCDMKFGSWTYDGNQVDLVL 211
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +1
Query: 142 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 306
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 307 WNAGGMG 327
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.0 bits (104), Expect = 4e-07
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 326 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 493
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 494 QLDHWPNDMQTCTFKFGSXMHNSDXMD 574
++++P D QTC KFGS ++ +D
Sbjct: 148 DVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.6 bits (103), Expect = 6e-07
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.2 bits (102), Expect = 8e-07
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 521 QTCTFKFGSXMHNSDXMD 574
Q C KFGS ++ +D
Sbjct: 160 QRCEMKFGSWTYDGFQLD 177
Score = 21.8 bits (44), Expect = 8.4
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +1
Query: 94 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 258
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 259 RILADLQMNWIDKRLSWNAGGMG 327
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 521 QTCTFKFGSXMHNSDXMDFVI 583
Q C KFGS ++ + +D V+
Sbjct: 123 QHCDMKFGSWTYDGNQVDLVL 143
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 232 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 327
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
ER+WRPD N + + R+S +G + + RL I M+L ++P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 524 TCTFKFGS 547
+C GS
Sbjct: 175 SCPLILGS 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDHWPND 517
V R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 518 MQTCTFKFGSXMHN 559
Q C K+ S ++
Sbjct: 142 EQRCVLKWASWTYD 155
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.9 bits (84), Expect = 1e-04
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +2
Query: 356 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQT 526
R+W+PD N + T R+ +G V + RL I M L+++P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 527 CTFKFGS 547
C +FGS
Sbjct: 144 CPLQFGS 150
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 288
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 289 IDKRLSWNAG 318
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.5 bits (83), Expect = 2e-04
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +2
Query: 350 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDHWPNDM 520
+E++W PD N + D R R+S +GSV++ R + M L ++P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 521 QTCTFKFGS 547
Q CT + S
Sbjct: 173 QNCTVEIES 181
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.5 bits (78), Expect = 6e-04
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDHWP 511
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 512 NDMQTCTFKFGSXMHNSDXMDFV 580
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 26.2 bits (55), Expect = 0.39
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +1
Query: 142 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 300
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 301 LSWNAGGMGLQHL 339
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.5 bits (78), Expect = 6e-04
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Frame = +2
Query: 341 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDHWP 511
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 512 NDMQTCTFKFGSXMHNSDXMDFV 580
D Q C+ + S +D + F+
Sbjct: 169 LDRQVCSLRMASYGWTTDDLVFL 191
Score = 29.1 bits (62), Expect = 0.055
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 142 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 300
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 301 LSWNAGGMGLQHL 339
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 35.1 bits (77), Expect = 8e-04
Identities = 16/77 (20%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 359 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQTC 529
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + +P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 530 TFKFGSXMHNSDXMDFV 580
+ S H + + F+
Sbjct: 147 SMMIESLSHTTQDLVFI 163
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 479 TPISMQLDHWPNDMQTCTFKFGS 547
M L ++P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
Score = 23.4 bits (48), Expect = 2.7
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 289 IDKRLSW 309
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 479 TPISMQLDHWPNDMQTCTFKFGS 547
M L ++P D Q C + S
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEIES 158
Score = 22.2 bits (45), Expect = 6.3
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 121 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 288
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 289 IDKRLSW 309
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.3 bits (75), Expect = 0.001
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Frame = +2
Query: 326 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 478
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 479 TPISMQLDHWPNDMQTCTFKFGS 547
M L ++P D Q C + S
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEIES 97
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDHWPNDMQ 523
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 524 TCTFKFGSXMHNSDXMDFVID 586
C + S H +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 115 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 279
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 280 MNWIDKRLSWNA 315
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 32.7 bits (71), Expect = 0.004
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Frame = +2
Query: 344 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDH--W 508
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + DH W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 509 PNDMQTCTFKFGSXMHNSD 565
P D+ CT S H S+
Sbjct: 167 PYDILNCTIHIASWSHGSN 185
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 359 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTC 529
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 530 TFKFGSXMHN 559
F S HN
Sbjct: 157 PLIFESWTHN 166
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +2
Query: 353 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDHWPND 517
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 518 MQTCTFKFGSXMHNSDXM 571
+Q C S ++ +
Sbjct: 127 IQICPIYIESFSYHKQKL 144
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 268
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.8 bits (54), Expect = 0.51
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +2
Query: 428 RVSNNGSVSWIKRLDISTPISMQLDHWPNDMQTCTFKFGSXMHNSDXMDFV 580
R+ NG+V+++ R + +L+ +P D C+F S + + +V
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 525 VCMSL--GQWSNCIEIGVLMSKRF 460
+CM L G WS C++ V M + F
Sbjct: 283 ICMMLLIGHWSGCLQFLVPMLQGF 306
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 4.8
Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -2
Query: 525 VCMSL--GQWSNCIEIGVLMSKRF 460
+CM L G WS C++ V M + F
Sbjct: 251 ICMMLLIGHWSGCLQFLVPMLQGF 274
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 6.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +1
Query: 589 KKYPRMFESPSVXCDXSXPXAV 654
++YPR+ + +V C S P V
Sbjct: 701 REYPRIMDLDNVMCRTSGPRGV 722
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 8.4
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +1
Query: 175 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 351
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 352 ---GTLV 363
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,327
Number of Sequences: 438
Number of extensions: 4630
Number of successful extensions: 83
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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