BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_I06 (931 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410,672... 33 0.43 02_01_0395 + 2869748-2870045,2870450-2870571,2871700-2871777,287... 30 3.0 02_05_0423 - 28834380-28835852,28836987-28837109 29 4.0 >02_02_0096 - 6727844-6727957,6728149-6728247,6728332-6728410, 6728534-6728634,6728740-6728808,6729180-6729220, 6729992-6730836,6730924-6731027,6731479-6732354 Length = 775 Score = 32.7 bits (71), Expect = 0.43 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -1 Query: 364 HXRSRGHQPSXAAPFPCVPTSVVCRSNSFEDLPVSAPV 251 H R R H+ S A P P P VV + + E PV APV Sbjct: 31 HHRPRQHRRSSAQPPPLPPPPVVAAAAAAEAAPVMAPV 68 >02_01_0395 + 2869748-2870045,2870450-2870571,2871700-2871777, 2871886-2872470,2872917-2873657,2873794-2873868 Length = 632 Score = 29.9 bits (64), Expect = 3.0 Identities = 20/72 (27%), Positives = 33/72 (45%) Frame = -2 Query: 318 PAFQPQSFVDPIHLKICQYPHRWTSDSRMLACLKCRVRLTTILESGGDSRSYVARSESIM 139 P + Q F + + LK C+ HR D + L +RL T + S GD+ S + + Sbjct: 548 PVQEAQKFAE-LSLKCCELRHRDRPDLESVV-LPELIRLHTFVASSGDNSSIDQGHQRSV 605 Query: 138 RDSDVAFSHSAA 103 D ++A + A Sbjct: 606 SDKELALENDLA 617 >02_05_0423 - 28834380-28835852,28836987-28837109 Length = 531 Score = 29.5 bits (63), Expect = 4.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = +3 Query: 249 STGADTGRSSNELDRQTTEVGTQGNGAAXLGWCPRERXWRPD 374 + AD G + ++ T E NGAA +G C E PD Sbjct: 28 AAAADLGHADTGQEKPTVESAQPANGAAPMGECGTEYRGLPD 69 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,699,346 Number of Sequences: 37544 Number of extensions: 259737 Number of successful extensions: 783 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 722 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2659245980 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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