Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_I06
         (931 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    32   1.3  
AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA ...    29   9.1  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -3

Query: 413   PAGXSTXTXXSTHVRPPXAFPRTPAKXCSPIPLRSN 306
             PAG +     S  V PP   P+TP+  C P P  +N
Sbjct: 20357 PAGYTGDPFTSCRVLPPPPPPKTPSDPCQPSPCGAN 20392


>AE014134-710|AAF51036.1| 5147|Drosophila melanogaster CG3352-PA
            protein.
          Length = 5147

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 262  SAPVDLGLTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 137
            SA ++  +TNV+ +  +GQVD  F +  +L I+     +D E
Sbjct: 1742 SAEIEYFVTNVTATGSRGQVDRLFDIDAKLGILSTAAELDRE 1783


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,350,905
Number of Sequences: 53049
Number of extensions: 427922
Number of successful extensions: 1228
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)