Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I05
(899 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 46 3e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 43 4e-04
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 41 0.001
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.002
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 40 0.004
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 39 0.006
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.015
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.015
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 38 0.015
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 38 0.015
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 38 0.015
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 36 0.045
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 34 0.14
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 34 0.18
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 34 0.18
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 33 0.24
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.55
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 32 0.73
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 32 0.73
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 32 0.73
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.96
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.7
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 31 1.7
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 30 2.2
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 30 2.2
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29) 30 2.9
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 29 3.9
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.1
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 29 6.8
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 6.8
SB_44065| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 28 8.9
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 28 8.9
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 46.4 bits (105), Expect = 3e-05
Identities = 29/119 (24%), Positives = 60/119 (50%), Gaps = 12/119 (10%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 272
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 273 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIS 428
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W++
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLA 153
Score = 40.7 bits (91), Expect = 0.002
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 108 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLX 272
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 273 WNAGEW-GCSTWLVSSERLWRPDVVLLN 353
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +3
Query: 120 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLXWNAG 284
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 285 EW-GCSTWLVSSERLWRPDVVLLNAA 359
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 42.7 bits (96), Expect = 4e-04
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 174 LTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLL 350
LTL+ H ++E ++ L+ W D RL WN E+ G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 351 NAAATTAG--DYALRARVSNNGSVSWIS 428
N+A + +R +++ G V W++
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMN 108
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Frame = +3
Query: 219 TVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 389
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 390 ---ARVSNNGSVSWIS 428
V +NG V W++
Sbjct: 92 GNPVLVESNGVVRWLA 107
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 246 MNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 359
+ W++ L WNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +3
Query: 192 HANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLL-NAAAT 365
H + + TV L W D L WN ++ G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 366 TAGD---YALRARVSNNGSVSWIS 428
++G+ + + + ++G+V W+S
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLS 282
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 39.5 bits (88), Expect = 0.004
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Frame = +3
Query: 252 WIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD--YALRA--RVSNNGSV 416
W + L WNA E+G S + ++LW+PD+ L N A ++A Y +A +VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 417 SWIS 428
W++
Sbjct: 179 MWLA 182
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID--KRIYXMFESGTWD 589
++T + + +P D Q+CT KFGS +++ +D I ++G WD
Sbjct: 186 LTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPTASIKGYQQNGEWD 238
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 398
+++ W D L WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 399 SNNGSVSWIS 428
S++GS +W+S
Sbjct: 86 SSDGSAAWLS 95
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK 553
I T + + +P D+Q C KFGS H+ ++D + K
Sbjct: 99 IKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.5 bits (83), Expect = 0.015
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +3
Query: 219 TVRILADLQMNWIDKRLXWNAGEWGCSTWLVSSER--LWRPDVVLLN 353
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.015
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 84 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 248
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 249 NWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 37.5 bits (83), Expect = 0.015
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 225 RILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNA 356
+++ + + W + L WNA E+G S VS +R W PD++L N+
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNS 60
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 37.5 bits (83), Expect = 0.015
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Frame = +3
Query: 183 HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLL-NA 356
HLR + V + ++ W + L WN ++G + ++ ++W PD++L NA
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 357 AATTAG---DYALRARVSNNGSVSWIS 428
T AG Y S++G+ W S
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNS 192
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 37.5 bits (83), Expect = 0.015
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 407
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 408 GSVSW 422
GS+ W
Sbjct: 336 GSIGW 340
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 35.9 bits (79), Expect = 0.045
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2
Query: 452 SMQLDNWPNDMQTCTFKFGSRMHNSDEM 535
SM L WP D QTC KFGS + S+ M
Sbjct: 200 SMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 35.5 bits (78), Expect = 0.059
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYALRARVSN 404
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 405 NGSVSWI 425
+G+V W+
Sbjct: 607 DGTVLWM 613
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +3
Query: 222 VRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAG----DYAL 386
+ I+ + + W ++ L W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 387 RARVSNNGSVSWIS 428
+S +GS +W S
Sbjct: 99 HVIISKDGSSAWFS 112
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 34.3 bits (75), Expect = 0.14
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 404
+ + W++ L W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 405 NGSVSWIS 428
NG W +
Sbjct: 124 NGYTEWFA 131
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 452 SMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIY--XMFESGTWDVTDLS 604
S+++ WP D+Q C+ FGS + + ++ + D Y +SG WD+ ++S
Sbjct: 40 SIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTDRFMQSGDWDIKEVS 94
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 33.9 bits (74), Expect = 0.18
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +2
Query: 452 SMQLDNWPNDMQTCTFKFGSRMHNSDEMDF--VIDKRIY--XMFESGTWDVTDLS 604
S+++ WP D+Q C+ FGS + + ++ + D Y +SG WD+ ++S
Sbjct: 121 SIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTDRFMQSGDWDIKEVS 175
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 33.5 bits (73), Expect = 0.24
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +3
Query: 252 WIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSNNGSV 416
W + L WN +G + VS ++W PD+VL NA A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 417 SWIS 428
W++
Sbjct: 100 MWLA 103
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 32.3 bits (70), Expect = 0.55
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 159 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRP 335
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 336 DVVLLN 353
D+VL N
Sbjct: 127 DIVLYN 132
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/68 (22%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 404
+ + W + + WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 405 NGSVSWIS 428
+G+ +W++
Sbjct: 104 SGTNTWLA 111
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYXM----FESGTWDVTDLS 604
+ T ++ + ++P D Q C FGS H+ +E++ + D++ + ++G W + +++
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGEWQIQNIT 64
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 31.9 bits (69), Expect = 0.73
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYXM----FESGTWDVTDLS 604
+ T ++ + ++P D Q C FGS H+ +E++ + D++ + ++G W + +++
Sbjct: 69 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGEWQIQNIT 128
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 31.5 bits (68), Expect = 0.96
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAG---DYALRARVSN 404
+ + W + L W+ +G T + V R+WRPD++L NA T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 405 NGSVSWIS 428
+GS W++
Sbjct: 135 DGSSLWLA 142
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDK---RIYXMFESGTWDVTDLSS 607
+++ + + +P D Q C+ KFGS ++ + +D V + + SG WD+ ++
Sbjct: 33 LTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVPSGQWDLVSFTA 92
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +2
Query: 437 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVID--KRIYXMFESGTWD 589
++T + + +P D Q+CT KFGS +++ +D I ++G WD
Sbjct: 33 LTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPTASIKGYQQNGEWD 85
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = +3
Query: 243 QMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARV--SNN 407
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 408 GSVSWIS 428
G + W S
Sbjct: 148 GDIEWYS 154
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.3 bits (65), Expect = 2.2
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +3
Query: 108 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNA 281
+++ LL YDR P + V +TL L T+ + D+ W + L WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 282 GEWG-CSTWLVSSERLWRPDVVL 347
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
Length = 355
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/54 (25%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +2
Query: 443 TPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYXM----FESGTWDV 592
T + + ++P D Q C FG+ ++ +E++ + +KR+ + E+G W V
Sbjct: 7 TMCKIDVTDFPFDSQRCPITFGAWQYDQNEVNLINNKRLATVASTRVENGEWTV 60
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 29.5 bits (63), Expect = 3.9
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = +3
Query: 252 WIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLN---AAATTAGDYAL---RARVSNNGS 413
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 414 VSWIS 428
V WI+
Sbjct: 464 VDWIA 468
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 252 WIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLN 353
W ++ L W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 300 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 410
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -1
Query: 209 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 105
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_3457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 848
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -1
Query: 497 TCKSACRWANCLTA*KLEC*CPSAYPGDGAVIRYTGAESVVPGGGCSR 354
TC R A C+ EC C Y GDG + +S P C R
Sbjct: 780 TCNDCNRHATCVAN---ECVCNPGYTGDGHQCQPDTCDSCPPNSHCMR 824
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +2
Query: 470 WPNDMQTCTFKFGSRMH-----NSDEMDFVIDKRIYXMFESGTWDVTDL 601
+P D QTC KFGS H + M+ R Y ++G W + D+
Sbjct: 230 FPFDSQTCKLKFGSFSHDITTLDMSPMNLTFPTRYYQ--KNGEWSIYDI 276
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 LQMNWIDKRLXWNAG-EWGCSTWLVSSERLWRPDVVLLN 353
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_44065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 115
Score = 28.3 bits (60), Expect = 8.9
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 330 RPDVVLLNAAATTAGDYALRARVSNNGSVSWISAWTLALQFLCS 461
RP+ L + A DY + ++ N +++I A TLA+ + S
Sbjct: 69 RPEQSLESMRAPELSDYYIPSKTQKNAELAYIGAGTLAIGYAAS 112
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 132 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXWNAGEWGC 296
YD+ P D+ V L + + N I E V + ++ NW D RL N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 297 STWLVSSERLWRPDVVLLNAAA 362
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 28.3 bits (60), Expect = 8.9
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Frame = +3
Query: 132 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLXWNAGEWGC 296
YD+ P D+ V L + + N I E V + ++ NW D RL N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 297 STWLVSSERLWRPDVVLLNAAA 362
+ E++WRPD NA A
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHA 94
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 28.3 bits (60), Expect = 8.9
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 4/118 (3%)
Frame = +3
Query: 87 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 254
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 255 IDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIS 428
D R N E + ++ W PD N + + A N+ W S
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWNVKRSKY-HHVTHAYTKNDLDYKWNS 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,879,093
Number of Sequences: 59808
Number of extensions: 452135
Number of successful extensions: 1145
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2586032617
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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