BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_I04 (842 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 368 e-102 At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 368 e-102 At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 368 e-102 At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 368 e-102 At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 199 2e-51 At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 196 1e-50 At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 102 3e-22 At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 99 4e-21 At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 56 2e-08 At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 56 2e-08 At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 52 4e-07 At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 52 5e-07 At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 6e-07 At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 48 8e-06 At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 43 3e-04 At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 43 3e-04 At5g13650.2 68418.m01585 elongation factor family protein contai... 42 4e-04 At5g13650.1 68418.m01584 elongation factor family protein contai... 42 4e-04 At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 41 0.001 At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 40 0.002 At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 39 0.004 At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 37 0.019 At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 37 0.019 At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 36 0.044 At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 33 0.31 At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 30 1.7 At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.7 At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 30 1.7 At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 2.2 At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 2.2 At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 29 2.9 At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 6.8 At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 8.9 At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 8.9 >At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha identical to SWISS-PROT:P13905 elongation factor 1-alpha (EF-1-alpha) [Arabidopsis thaliana] Length = 449 Score = 368 bits (905), Expect = e-102 Identities = 171/213 (80%), Positives = 189/213 (88%) Frame = +3 Query: 69 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 248 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 249 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 428 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 429 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 608 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 609 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 707 +GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 368 bits (905), Expect = e-102 Identities = 171/213 (80%), Positives = 189/213 (88%) Frame = +3 Query: 69 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 248 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 249 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 428 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 429 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 608 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 609 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 707 +GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 368 bits (905), Expect = e-102 Identities = 171/213 (80%), Positives = 189/213 (88%) Frame = +3 Query: 69 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 248 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 249 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 428 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 429 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 608 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 609 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 707 +GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha identical to GB:CAA34456 from [Arabidopsis thaliana] (Plant Mol. Biol. 14 (1), 107-110 (1990)) Length = 449 Score = 368 bits (905), Expect = e-102 Identities = 171/213 (80%), Positives = 189/213 (88%) Frame = +3 Query: 69 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 248 MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60 Query: 249 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 428 DKLKAERERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + T Sbjct: 61 DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120 Query: 429 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 608 G FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++EI KEVSSY+KK Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180 Query: 609 IGYNPXAVAFVPISGWHGDNMLEPSTKMPWFKG 707 +GYNP + FVPISG+ GDNM+E ST + W+KG Sbjct: 181 VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG 213 >At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein, putative similar to EF-1-alpha-related GTP-binding protein gi|1009232|gb|AAA79032 Length = 532 Score = 199 bits (486), Expect = 2e-51 Identities = 96/213 (45%), Positives = 142/213 (66%), Gaps = 3/213 (1%) Frame = +3 Query: 78 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 257 +K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157 Query: 258 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 437 + ER +G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEF Sbjct: 158 EEERLKGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEF 217 Query: 438 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGY 617 E G + GQTREH LA TLGV +LIV VNKMD +S+ R++EI++++ ++K GY Sbjct: 218 ETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGY 277 Query: 618 NPXA-VAFVPISGWHGDNMLEPSTK--MPWFKG 707 N V F+PISG G NM + + PW+ G Sbjct: 278 NTKKDVVFLPISGLMGKNMDQRMGQEICPWWSG 310 >At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / EF-1-alpha, putative contains similarity to SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha) [Aeropyrum pernix] Length = 667 Score = 196 bits (479), Expect = 1e-50 Identities = 91/212 (42%), Positives = 141/212 (66%), Gaps = 4/212 (1%) Frame = +3 Query: 84 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 263 + +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297 Query: 264 ERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 443 ERERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEA Sbjct: 298 ERERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEA 357 Query: 444 GISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 620 G GQTREHA + GV+Q+IV +NKMD YS+ RF+ IK+ V S+++ + Sbjct: 358 GFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQSCRFK 415 Query: 621 PXAVAFVPISGWHGDNML-EPSTK--MPWFKG 707 ++ ++P+S N++ PS W++G Sbjct: 416 DSSLTWIPLSAMENQNLVAAPSDNRLSSWYQG 447 >At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) identical to SWISS-PROT:P17745 elongation factor Tu, chloroplast precursor (EF-Tu) [Arabidopsis thaliana] Length = 476 Score = 102 bits (245), Expect = 3e-22 Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 1/179 (0%) Frame = +3 Query: 66 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWV 245 K ++K H+NI IGHVD GK+T T L I +K+++ Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE--------------- 116 Query: 246 LDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG 425 +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ Sbjct: 117 IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 176 Query: 426 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 599 G QT+EH LLA +GV ++V +NK D + E E+++ +SSY Sbjct: 177 DGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSY 228 >At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu, putative similar to mitochondrial elongation factor Tu [Arabidopsis thaliana] gi|1149571|emb|CAA61511 Length = 454 Score = 98.7 bits (235), Expect = 4e-21 Identities = 66/198 (33%), Positives = 97/198 (48%) Frame = +3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 254 + K H+N+ IGHVD GK+T T + K E GK +DK Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLTAAIT---------------KVLAEEGKAKAIAFDEIDK 107 Query: 255 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 434 E++RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G Sbjct: 108 APEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGP 167 Query: 435 FEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 614 QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K G Sbjct: 168 MP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPG 220 Query: 615 YNPXAVAFVPISGWHGDN 668 + + +S G N Sbjct: 221 DDIPIIRGSALSALQGTN 238 >At2g45030.1 68415.m05606 mitochondrial elongation factor, putative similar to SP|P25039 Elongation factor G 1, mitochondrial precursor (mEF-G-1) {Saccharomyces cerevisiae}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03764: Elongation factor G domain IV, PF00679: Elongation factor G C-terminus Length = 754 Score = 56.4 bits (130), Expect = 2e-08 Identities = 41/128 (32%), Positives = 61/128 (47%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 273 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 452 +GITI A Y V IID PGH DF + D A+L++ + G I+ Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 453 KNGQTREH 476 + Q R + Sbjct: 177 VDRQMRRY 184 >At1g45332.1 68414.m05195 mitochondrial elongation factor, putative similar to mitochondrial elongation factor GI:3917 from [Saccharomyces cerevisiae] Length = 754 Score = 56.4 bits (130), Expect = 2e-08 Identities = 41/128 (32%), Positives = 61/128 (47%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 NI + H+DSGK+T T +++ G I E E ++ G G+ +D + ERE Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRIH----EIHEVRGRD-GVGA-----KMDSMDLERE 116 Query: 273 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 452 +GITI A Y V IID PGH DF + D A+L++ + G I+ Sbjct: 117 KGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSIT 176 Query: 453 KNGQTREH 476 + Q R + Sbjct: 177 VDRQMRRY 184 >At5g08650.1 68418.m01029 GTP-binding protein LepA, putative Length = 681 Score = 52.4 bits (120), Expect = 4e-07 Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 4/174 (2%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 N +I H+D GKST L+ G + R + K F LD + ERE Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDM-----------KEQF-----LDNMDLERE 131 Query: 273 RGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE 440 RGITI + + +E + + + +ID PGH DF + + + A+L+V A G E Sbjct: 132 RGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VE 190 Query: 441 AGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 602 A QT + LA + ++I +NK+D P +EP E++ +E+ I Sbjct: 191 A------QTLANVYLALENNL-EIIPVLNKIDL---PGAEP--EKVLREIEEVI 232 >At3g22980.1 68416.m02898 elongation factor Tu family protein similar to eukaryotic translation elongation factor 2 GB:NP_001952 [Homo sapiens] Length = 1015 Score = 52.0 bits (119), Expect = 5e-07 Identities = 36/113 (31%), Positives = 53/113 (46%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 NI ++ HVD GK+T HLI GG + GK F +D L E+ Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG--------GVLHPRLAGKLRF-----MDYLDEEQR 57 Query: 273 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 431 R IT+ + + Y + +ID+PGH DF + T +D A+++V A G Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110 >At1g62750.1 68414.m07082 elongation factor Tu family protein similar to elongation factor G SP:P34811 [Glycine max (Soybean)] Length = 783 Score = 51.6 bits (118), Expect = 6e-07 Identities = 36/117 (30%), Positives = 56/117 (47%) Frame = +3 Query: 81 KTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK 260 K + NI ++ H+D+GK+TTT ++Y G K E+ +G+ W ++ Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTGRNYK---------IGEVHEGTATMDW----ME 140 Query: 261 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 431 E+ERGITI A K+ + IID PGH DF + D A+ + + G Sbjct: 141 QEQERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197 >At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-binding protein GUF1 - Saccharomyces cerevisiae, PIR:S50374 Length = 661 Score = 48.0 bits (109), Expect = 8e-06 Identities = 58/189 (30%), Positives = 80/189 (42%), Gaps = 9/189 (4%) Frame = +3 Query: 57 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 236 D K EK N +I H+D GKST L+ G I K G G +Y Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK-------------GHGQPQY 102 Query: 237 AWVLDKLKAERERGITIDIALWKF---------ETSKYYVTIIDAPGHRDFIKNMITGTS 389 LDKL +RERGIT+ E S Y + +ID PGH DF + S Sbjct: 103 ---LDKL--QRERGITVKAQTATMFYENKVEDQEASGYLLNLIDTPGHVDFSYEVSRSLS 157 Query: 390 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 569 A+L+V A G QT + LAF + ++ +NK+D P ++P Sbjct: 158 ACQGALLVVDAAQG-------VQAQTVANFYLAFEANL-TIVPVINKIDQ---PTADP-- 204 Query: 570 EEIKKEVSS 596 E +K ++ S Sbjct: 205 ERVKAQLKS 213 >At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 471 Score = 42.7 bits (96), Expect = 3e-04 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Frame = +3 Query: 63 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 233 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 234 YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 380 Y DK + +E T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 381 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 560 G + D A+L++AA QT EH + +K +I+ NK+D + Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200 Query: 561 PRFEEIKKEVSS 596 + E I+K +++ Sbjct: 201 EQHEAIQKFITN 212 >At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to SP|Q09130 Eukaryotic translation initiation factor 2 gamma subunit (eIF-2- gamma) {Schizosaccharomyces pombe}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain; isoform predicted to contain a TG non-consensus acceptor splice site. Length = 284 Score = 42.7 bits (96), Expect = 3e-04 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 14/192 (7%) Frame = +3 Query: 63 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK-RTIEKFEKEAQ-EMGKGSFK- 233 P++ + INI IGHV GKST ++ G+ R + E+ ++G + K Sbjct: 31 PEVISRQATINIGTIGHVAHGKST----IVKAISGVQTVRFKNELERNITIKLGYANAKI 86 Query: 234 YAWVLDKLK---------AERERGITIDIALWKF--ETSKYYVTIIDAPGHRDFIKNMIT 380 Y DK + +E T D+ ++ T + +V+ +D PGH + M+ Sbjct: 87 YKCEDDKCPRPMCYKSYGSGKEDNPTCDVPGFENCKMTLRRHVSCVDCPGHDILMATMLN 146 Query: 381 GTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE 560 G + D A+L++AA QT EH + +K +I+ NK+D + Sbjct: 147 GAAIVDGALLLIAANES------CPQPQTAEHLASVDMMRLKHIIILQNKIDLINEKAAT 200 Query: 561 PRFEEIKKEVSS 596 + E I+K +++ Sbjct: 201 EQHEAIQKFITN 212 >At5g13650.2 68418.m01585 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 676 Score = 42.3 bits (95), Expect = 4e-04 Identities = 46/159 (28%), Positives = 66/159 (41%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE Sbjct: 85 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 129 Query: 273 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 452 RGITI V IID PGH DF + + D +L+V + G Sbjct: 130 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 185 Query: 453 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 569 QTR A G ++V VNK+D P + P F Sbjct: 186 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 217 >At5g13650.1 68418.m01584 elongation factor family protein contains Pfam profiles: PF00009 elongation factor Tu GTP binding domain,PF00679 elongation factor G C-terminus, PF03144 elongation factor Tu domain 2 Length = 675 Score = 42.3 bits (95), Expect = 4e-04 Identities = 46/159 (28%), Positives = 66/159 (41%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 NI ++ HVD GK+T ++ + K ++ Q M + ++D ERE Sbjct: 84 NIAIVAHVDHGKTTLVDSMLRQA---------KVFRDNQVMQER------IMDSNDLERE 128 Query: 273 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 452 RGITI V IID PGH DF + + D +L+V + G Sbjct: 129 RGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMP---- 184 Query: 453 KNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 569 QTR A G ++V VNK+D P + P F Sbjct: 185 ---QTRFVLKKALEFG-HAVVVVVNKIDR---PSARPEF 216 >At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative Length = 465 Score = 40.7 bits (91), Expect = 0.001 Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 8/186 (4%) Frame = +3 Query: 63 PKMGKEKTHINIVVIGHVDSGKST----TTG-HLIYKCGGIDKR-TIEKFEKEAQEMGKG 224 P++ + INI IGHV GKST +G H + +++ TI+ A+ Sbjct: 25 PEVISRQATINIGTIGHVAHGKSTIVKAVSGVHTVKFKSELERNITIKLGYANAKIYKCE 84 Query: 225 SFKYAWVLDKLKAERERGITIDIALWKFETSKY--YVTIIDAPGHRDFIKNMITGTSQAD 398 + +E + D++ + K +V+ +D PGH + M+ G + D Sbjct: 85 KCPRPVAYKSFGSGKEDNPSCDVSGHEKYKMKLLRHVSFVDCPGHDILMATMLNGAAIMD 144 Query: 399 CAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEI 578 A+LI+AA QT EH + +K +I+ NK+D + + + E+I Sbjct: 145 GALLIIAANE------TCPQPQTAEHLASVDMMHLKDIIIIQNKIDLIQENEAIKQHEDI 198 Query: 579 KKEVSS 596 ++ +++ Sbjct: 199 QRFITN 204 >At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2 subunit 3, putative / eIF2S3, putative / eIF-2-gamma, putative similar to gb|U37354 from S. pombe. ESTs gb|T41979, gb|N37284 and gb|N37529 come from this gene Length = 465 Score = 40.3 bits (90), Expect = 0.002 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 4/103 (3%) Frame = +3 Query: 306 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 473 FE SK +V+ +D PGH + M+ G + D A+L++AA QT E Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165 Query: 474 HALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYI 602 H + +K +I+ NK+D + + + E I+K + + + Sbjct: 166 HLAAVEIMQLKHIIILQNKIDLIQENVAINQHEAIQKFIMNTV 208 >At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, putative similar to ELONGATION FACTOR 2 GB:O14460 from [Schizosaccharomyces pombe] Length = 843 Score = 39.1 bits (87), Expect = 0.004 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 4/112 (3%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRT---IEKFEKEAQEMGKG-SFKYAWVLDKLK 260 N+ VI HVD GKST T L+ G I + + + A E +G + K + + Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLYYE 80 Query: 261 AERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 416 E ++ + ++Y + +ID+PGH DF + D A+++V Sbjct: 81 MTDE---SLKSFTGARDGNEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129 >At1g06220.2 68414.m00656 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 36.7 bits (81), Expect = 0.019 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 N+ ++GH+ GK+ L+ + + K EK KY D E+E Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187 Query: 273 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 431 R I+I + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At1g06220.1 68414.m00655 elongation factor Tu family protein similar to Cryptosporidium parvum elongation factor-2 GB:U21667 GI:706974 from [Cryptosporidium parvum] Length = 987 Score = 36.7 bits (81), Expect = 0.019 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 5/118 (4%) Frame = +3 Query: 93 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 272 N+ ++GH+ GK+ L+ + + K EK KY D E+E Sbjct: 140 NVALVGHLQHGKTVFMDMLVEQTHHMSTFNA-KNEKH--------MKYT---DTRVDEQE 187 Query: 273 RGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 431 R I+I + L + Y I+D PGH +F M AD AVLIV A G Sbjct: 188 RNISIKAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245 >At4g11160.1 68417.m01808 translation initiation factor IF-2, mitochondrial, putative similar to SP|P46198|IF2M_BOVIN Translation initiation factor IF-2, mitochondrial precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus} Length = 743 Score = 35.5 bits (78), Expect = 0.044 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%) Frame = +3 Query: 327 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 506 +T +D PGH F + G + D VL+VAA G QT E A + V Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDGVMP-------QTLEAIAHARSANV- 321 Query: 507 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSS---YIKKIGYNPXAV 632 ++V +NK D P + P E++K +++S ++ IG N AV Sbjct: 322 PVVVAINKCDK---PGANP--EKVKYQLTSEGIELEDIGGNVQAV 361 >At3g01360.1 68416.m00057 expressed protein contains Pfam profile PF04819: Family of unknown function (DUF716) (Plant viral-response family) Length = 319 Score = 32.7 bits (71), Expect = 0.31 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%) Frame = +3 Query: 336 IDAPGHRDFIKNMITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 512 I GH D+ + T Q +C + L+V TG F +KNG R+ LG + Sbjct: 226 IKCKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELE 285 Query: 513 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 620 + +DS E +E+++E S+ K++G N Sbjct: 286 NLSTFTLDSDEE-------DEVREE-SNVAKEVGLN 313 >At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ornithine--oxo-acid aminotransferase, putative similar to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13) (Ornithine--oxo-acid aminotransferase) [Aspergillus nidulans] {Emericella nidulans}; contains Pfam profile PF00202: aminotransferase, class III Length = 475 Score = 30.3 bits (65), Expect = 1.7 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = +3 Query: 492 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISG 653 T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67 >At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1201 Score = 30.3 bits (65), Expect = 1.7 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = +3 Query: 333 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 512 +ID PGH F G+S D A+L+V + + G+ QT E +L + + Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV-----DIKHGLEP--QTIE-SLNLLRMRNTEF 756 Query: 513 IVGVNKMD 536 I+ +NK+D Sbjct: 757 IIALNKVD 764 >At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profiles PF00009: Elongation factor Tu GTP binding domain, PF03144: Elongation factor Tu domain 2 Length = 1088 Score = 30.3 bits (65), Expect = 1.7 Identities = 22/70 (31%), Positives = 33/70 (47%) Frame = +3 Query: 327 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 506 + +ID PGH F G++ D A+L+V + G+ QT E L VK Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV-----DIMRGLEP--QTIESLNLLRRRNVK 610 Query: 507 QLIVGVNKMD 536 I+ +NK+D Sbjct: 611 -FIIALNKVD 619 >At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to SP|O60841 Translation initiation factor IF-2 {Homo sapiens}; contains Pfam profile PF00009: Elongation factor Tu GTP binding domain Length = 630 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 333 IIDAPGHRDFIKNMITGTSQADCAVLIV 416 +ID PGH F G+S D A+L+V Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140 >At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2 family protein / eIF-2 family protein similar to IF2 protein [Drosophila melanogaster] GI:7108770; contains Pfam profile PF03144: Elongation factor Tu domain 2 Length = 1294 Score = 29.9 bits (64), Expect = 2.2 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 Query: 333 IIDAPGHRDFIKNMITGTSQADCAVLIV 416 +ID PGH F G+S D A+L+V Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799 >At1g17220.1 68414.m02098 translation initiation factor IF-2, chloroplast, putative similar to SP|P57997|IF2C_PHAVU Translation initiation factor IF-2, chloroplast precursor (PvIF2cp) {Phaseolus vulgaris} Length = 1026 Score = 29.5 bits (63), Expect = 2.9 Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 4/99 (4%) Frame = +3 Query: 252 KLKAERERGITIDIALWKFET----SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 419 K+ A GIT I +K +D PGH F G D A+++VA Sbjct: 525 KVAASEAGGITQGIGAYKVSVPVDGKLQSCVFLDTPGHEAFGAMRARGARVTDIAIIVVA 584 Query: 420 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 536 A G QT E A+ +++ +NK+D Sbjct: 585 ADDG-------IRPQTNE-AIAHAKAAAVPIVIAINKID 615 >At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein similar to 1,4-alpha-glucan branching enzyme [Solanum tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum tuberosum} SP|P30924; contains Pfam profiles: PF00128 Alpha amylase catalytic domain, PF02922 Isoamylase N-terminal domain Length = 777 Score = 28.3 bits (60), Expect = 6.8 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%) Frame = +3 Query: 555 SEPR---FEEIKKEVSSYIKKIGYNPXAVAFVP 644 SEP+ FEE K+V ++K+ GYN + VP Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289 >At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain Length = 747 Score = 27.9 bits (59), Expect = 8.9 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +2 Query: 608 DWLQPXCCRFRAHFWMARRQHVGAFNQNALVQGM 709 DW+ C AHF RR +GAF A G+ Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720 >At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase family protein similar to Potential phospholipid-transporting ATPase (EC 3.6.3.1) from Homo sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200, SP|P70704], {Bos taurus} SP|Q29449; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase Length = 1184 Score = 27.9 bits (59), Expect = 8.9 Identities = 15/53 (28%), Positives = 24/53 (45%) Frame = +3 Query: 438 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 596 E+G +TR+H G++ LI+ ++D E R E K VS+ Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,320,076 Number of Sequences: 28952 Number of extensions: 332045 Number of successful extensions: 987 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 939 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 971 length of database: 12,070,560 effective HSP length: 80 effective length of database: 9,754,400 effective search space used: 1950880000 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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