Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_I02
(851 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 365 e-101
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 365 e-101
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 365 e-101
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 365 e-101
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 262 3e-70
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 262 3e-70
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 155 4e-38
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 155 4e-38
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 30 1.8
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 29 4.2
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 365 bits (897), Expect = e-101
Identities = 164/254 (64%), Positives = 196/254 (77%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 572
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 573 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKL 752
+EIQ+NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKL
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 753 PVRHTRVLGKLPAL 794
P + + L K+ +
Sbjct: 241 PRKTHKGLRKVACI 254
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 365 bits (897), Expect = e-101
Identities = 164/254 (64%), Positives = 196/254 (77%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 572
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 573 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKL 752
+EIQ+NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKL
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 753 PVRHTRVLGKLPAL 794
P + + L K+ +
Sbjct: 241 PRKTHKGLRKVACI 254
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 365 bits (897), Expect = e-101
Identities = 164/254 (64%), Positives = 196/254 (77%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 572
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 573 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKL 752
+EIQ+NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKL
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 753 PVRHTRVLGKLPAL 794
P + + L K+ +
Sbjct: 241 PRKTHKGLRKVACI 254
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 365 bits (897), Expect = e-101
Identities = 164/254 (64%), Positives = 196/254 (77%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHI 572
NW WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH+
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHL 180
Query: 573 MEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKL 752
+EIQ+NGGTIE KV WAREHLEK + VD+VFAQDEMID I SRWHTKKL
Sbjct: 181 VEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKL 240
Query: 753 PVRHTRVLGKLPAL 794
P + + L K+ +
Sbjct: 241 PRKTHKGLRKVACI 254
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 238 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 272
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 262 bits (641), Expect = 3e-70
Identities = 114/168 (67%), Positives = 134/168 (79%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 536
NW WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 224
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 660 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLGKLPAL 794
V A +MID I SRWHTKKLP + + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 262 bits (641), Expect = 3e-70
Identities = 114/168 (67%), Positives = 134/168 (79%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREP 212
MSHRKFS PRHG MGF PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDV 60
Query: 213 DRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYK 392
D+PGSK+NKKE+VEAVTI+ETPPMV GV GY++TP G RAL T+WAEH+SE+ RRRFY
Sbjct: 61 DKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALTTIWAEHLSEEARRRFYS 120
Query: 393 NWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQM 536
NW WQDE G+K IE DF K+ +YCS +RVIAHTQM
Sbjct: 121 NWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQM 168
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 190 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 224
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 660 VFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLGKLPAL 794
V A +MID I SRWHTKKLP + + L K+ +
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 206
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 155 bits (376), Expect = 4e-38
Identities = 72/118 (61%), Positives = 88/118 (74%)
Frame = +3
Query: 441 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 620
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 621 AREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLGKLPAL 794
AREHLEK + VD+VFAQDEMID I SRWHTKKLP + + L K+ +
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPK 134
MSHRKFS PRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 155 bits (376), Expect = 4e-38
Identities = 72/118 (61%), Positives = 88/118 (74%)
Frame = +3
Query: 441 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKW 620
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+NGGTIE KV W
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 621 AREHLEKPIPVDSVFAQDEMIDCIXXXXXXXXXXXXSRWHTKKLPVRHTRVLGKLPAL 794
AREHLEK + VD+VFAQDEMID I SRWHTKKLP + + L K+ +
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACI 156
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +2
Query: 743 KEATRKTHKGLRKVACIGXWHPSRVSSTVXRAGQK 847
K+ RKTHKGLRKVACIG WHPSRV+ TV RAGQK
Sbjct: 140 KKLPRKTHKGLRKVACIGAWHPSRVAFTVARAGQK 174
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 33 MSHRKFSVPRHGSMGFYPKKRSRRHRGKVKAFPK 134
MSHRKFS PRHG MGF PKKRSR +RG++KAF K
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFTK 34
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 273 TPPMVCVGVVGYIETPHGLRALLTVWAEHMSEDCRRRFYKNWY 401
T P + GY++ G+R VW E S+ + KNW+
Sbjct: 201 TDPNGYFDIAGYVDQSSGVRGRFWVWHECFSQKYHKDPCKNWF 243
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +2
Query: 254 GCHHHRDSSDGLCRCCWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEGF 421
GC + G C W + DPS T + DC +Y ++ L + V M+ GF
Sbjct: 1160 GCSSITCLNGGHCSVAWANTDPSAATTTCDCSRTSYT--GASCSLDEGVHMERSGF 1213
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,327,418
Number of Sequences: 27780
Number of extensions: 441754
Number of successful extensions: 1173
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1167
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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