Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_H24
         (905 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut pr...    32   1.2  
DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker p...    32   1.2  
AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB...    32   1.2  
BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p pro...    29   8.8  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.8  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.8  
AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-P...    29   8.8  

>DQ991915-1|ABJ09588.1| 2176|Drosophila melanogaster eyes shut
            protein.
          Length = 2176

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 532  PPSPAISATSTRSSKSPIPYTNHPRL*HPXPSIPXTP 642
            PPSP   AT T +    +P    P +  P P+IP TP
Sbjct: 918  PPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTP 954


>DQ780942-1|ABH07112.1| 2165|Drosophila melanogaster spacemaker
            protein.
          Length = 2165

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 532  PPSPAISATSTRSSKSPIPYTNHPRL*HPXPSIPXTP 642
            PPSP   AT T +    +P    P +  P P+IP TP
Sbjct: 907  PPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTP 943


>AE014134-390|AAZ83988.1| 1984|Drosophila melanogaster CG33955-PB
           protein.
          Length = 1984

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 532 PPSPAISATSTRSSKSPIPYTNHPRL*HPXPSIPXTP 642
           PPSP   AT T +    +P    P +  P P+IP TP
Sbjct: 711 PPSPPSLATETPTLPPTLPPVTLPPVTQPPPTIPPTP 747


>BT003538-1|AAO39542.1|  995|Drosophila melanogaster RE07016p
           protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 24/80 (30%), Positives = 33/80 (41%)
 Frame = +2

Query: 491 LSHYYWRSRPYASSHPPLRSRLHQPDHQNPRFHTPTTPDFNIHXHQXXXXXXXXXXXXGV 670
           +S+Y+  S P+A SHP    ++H    QNP  H    P    H H               
Sbjct: 1   MSNYHPHSHPHALSHPH-PQQVHN-QLQNP--HQNQLPPPQRHNHAAPTAAASASGAPSS 56

Query: 671 KXXRWSSEGSIRVSHPPRSL 730
                S+  SI V+HPP+ L
Sbjct: 57  SASA-SASASILVAHPPQPL 75


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 230  SSTFGHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 355
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETF-QKFCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 230  SSTFGHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 355
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETF-QKFCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014134-2415|AAF53343.2|  995|Drosophila melanogaster CG31811-PB,
           isoform B protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 24/80 (30%), Positives = 33/80 (41%)
 Frame = +2

Query: 491 LSHYYWRSRPYASSHPPLRSRLHQPDHQNPRFHTPTTPDFNIHXHQXXXXXXXXXXXXGV 670
           +S+Y+  S P+A SHP    ++H    QNP  H    P    H H               
Sbjct: 1   MSNYHPHSHPHALSHPH-PQQVHN-QLQNP--HQNQLPPPQRHNHAAPTAAASASGAPSS 56

Query: 671 KXXRWSSEGSIRVSHPPRSL 730
                S+  SI V+HPP+ L
Sbjct: 57  SASA-SASASILVAHPPQPL 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,882,338
Number of Sequences: 53049
Number of extensions: 746822
Number of successful extensions: 2442
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2439
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)