Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H24
(905 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 0.72
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 25 1.3
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 25 1.3
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 25 1.3
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 25 1.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 25 1.3
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 25 1.3
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 25 1.3
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 25 1.3
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 1.3
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 1.7
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 2.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 2.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 2.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 2.9
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 23 2.9
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 23 2.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.9
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 23 2.9
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 2.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 5.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 5.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 5.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 5.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 5.1
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 5.1
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 23 5.1
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 8.8
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.72
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHDFQHTSSRY 231
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 196 SKKYATSSNSLRSRTHGFQHTSSRY 220
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 196 SKKYATSSNSLRSRTHGFQHTSSRY 220
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 1.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + R+
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSRY 231
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHDFQHTSSRY 231
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 196 SKKYATSSNSLRNRTHGFQHTSSRY 220
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSRY 231
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSRY 231
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 196 SKKYATSSNSLRNRTHGFQHTSSRY 220
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSRY 231
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 196 SKKYATSSNSLRNRTHGFQHTSSRY 220
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 212 SKKYATSSNSLRNRTHGFQHTSSRY 236
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSRY 231
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.4 bits (48), Expect = 2.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LR+R H H + R+
Sbjct: 207 SKKYATSSNSLRNRTHGFQHTSSRY 231
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSHY 231
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSHY 231
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSHY 231
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSHY 231
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 196 SKKYATSSNSLRSRTHGFQHTSSHY 220
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 22.6 bits (46), Expect = 5.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 512 SRPYASSHPPLRSRLHQPDHQNPRF 586
S+ YA+S LRSR H H + +
Sbjct: 207 SKKYATSSNSLRSRTHGFQHTSSHY 231
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 22.6 bits (46), Expect = 5.1
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +1
Query: 205 RSDLPWDGLLNVWSS 249
RS+LPW N W++
Sbjct: 93 RSELPWGSCNNYWNT 107
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 8.8
Identities = 10/18 (55%), Positives = 12/18 (66%), Gaps = 1/18 (5%)
Frame = -3
Query: 738 QW-PSDRGG*DTLMEPSD 688
+W P D GG DTL PS+
Sbjct: 83 KWNPDDYGGVDTLHVPSE 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,463
Number of Sequences: 438
Number of extensions: 4684
Number of successful extensions: 39
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29388177
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -