Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H22
(872 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 3e-22
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 93 3e-19
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 93 4e-19
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 78 8e-15
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 4e-14
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 72 5e-13
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 5e-12
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 68 1e-11
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 5e-11
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 64 2e-10
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 63 2e-10
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 63 2e-10
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 60 2e-09
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 56 4e-08
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 55 7e-08
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 3e-07
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 53 3e-07
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 52 8e-07
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 52 8e-07
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 48 8e-06
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 45 9e-05
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 42 5e-04
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 38 0.014
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 37 0.025
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.033
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 35 0.075
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 33 0.23
SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 31 0.93
SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73) 29 3.8
SB_5249| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 28 8.7
SB_9809| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 102 bits (245), Expect = 3e-22
Identities = 51/129 (39%), Positives = 81/129 (62%)
Frame = +1
Query: 280 GXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRL 459
G +++ PTREL + + V R L + + K + L++ +++IATPGRL
Sbjct: 646 GVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRL 705
Query: 460 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXK 639
+DH++NT F +++ LV+DEADR+L+ F E+M++IIR KRQT+LFSAT + +
Sbjct: 706 LDHLQNTQGFLYKNLQCLVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVE 765
Query: 640 DLAAVSLXK 666
DLA +SL +
Sbjct: 766 DLAKLSLKR 774
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 93.1 bits (221), Expect = 3e-19
Identities = 50/127 (39%), Positives = 73/127 (57%)
Frame = +1
Query: 280 GXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRL 459
G LV+ PTREL + V ++ D+K ++ + + +IV+ TPGRL
Sbjct: 124 GALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMKT-NIVVCTPGRL 182
Query: 460 IDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXK 639
+ H+ TP+F S+++LVLDEADR+LD FA + II +RQT+L+SAT K
Sbjct: 183 LQHMDETPNFDCTSLQILVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVK 242
Query: 640 DLAAVSL 660
DLA +SL
Sbjct: 243 DLARLSL 249
Score = 38.3 bits (85), Expect = 0.008
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 51 ENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLP 230
E F + +S+ + + FV PT IQ IP+AL G+DV +++P
Sbjct: 48 EVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSGKTLAFLIP 107
Query: 231 ILERL 245
I+E L
Sbjct: 108 IIETL 112
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 92.7 bits (220), Expect = 4e-19
Identities = 51/128 (39%), Positives = 71/128 (55%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 465
+VL PTREL ++ + L + D+ Q L P +VIATPGRL D
Sbjct: 79 VVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLAD 138
Query: 466 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXKDL 645
HI++T + L I+ LVLDEADR+LD F + +K I KRQT+LFSAT+ + +L
Sbjct: 139 HIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSATLTDTMGEL 198
Query: 646 AAVSLXKP 669
+S +P
Sbjct: 199 QKMSGSQP 206
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 239
SF + L++ L+ ++ PT IQ +P L G+D + LPIL+
Sbjct: 8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQ 67
Query: 240 RL 245
+L
Sbjct: 68 KL 69
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 78.2 bits (184), Expect = 8e-15
Identities = 50/124 (40%), Positives = 65/124 (52%)
Frame = +1
Query: 277 PGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 456
P LVL PTREL +V V + + Q L + +I IATPGR
Sbjct: 133 PIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGR 192
Query: 457 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEX 636
LID + + + L LVLDEADRMLD F Q++ II Q P RQT+++SAT +E
Sbjct: 193 LIDMLESRKT-NLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEV 251
Query: 637 KDLA 648
+ LA
Sbjct: 252 QGLA 255
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 75.8 bits (178), Expect = 4e-14
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Frame = +1
Query: 274 SPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPG 453
SP L + PTREL +++ R+ + V YQ S L + ++ TPG
Sbjct: 552 SPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPG 611
Query: 454 RLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQ----CSPKRQTMLFSAT 621
RL D + + L SI+ L+LDEADRMLD F + ++I + RQT++FSAT
Sbjct: 612 RLQDFVSREKIY-LGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSAT 670
Query: 622 MXEEXKDLAAVSLXKP 669
+E + LA S KP
Sbjct: 671 FPDEIQHLAG-SFLKP 685
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/73 (31%), Positives = 33/73 (45%)
Frame = +3
Query: 30 EEPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXX 209
E PP + SF + LM I + PTP+Q A +PI + G+D+
Sbjct: 472 ENQPP--KITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQTGSGK 529
Query: 210 XXXYMLPILERLL 248
YMLP+L L+
Sbjct: 530 TAAYMLPVLTSLI 542
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 72.1 bits (169), Expect = 5e-13
Identities = 44/131 (33%), Positives = 64/131 (48%)
Frame = +1
Query: 277 PGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 456
P LVL PTREL ++ V L + ++ L IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 457 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEX 636
+ D IR + SI++LVLDEAD ML++ F EQ+ ++ R P Q +L SAT+ E
Sbjct: 126 VFDMIRRR-NLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEI 184
Query: 637 KDLAAVSLXKP 669
++ + + P
Sbjct: 185 LEMTSKFMTDP 195
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 72.1 bits (169), Expect = 5e-13
Identities = 36/92 (39%), Positives = 52/92 (56%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 465
L+L PTREL ++ L D+ Q +L + P I+IATPGRLID
Sbjct: 36 LILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLID 95
Query: 466 HIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQ 561
H+ NT F L +++ LV+DEADR+L+ F ++
Sbjct: 96 HLENTKGFSLRTLKYLVMDEADRILNMDFEKE 127
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 72.1 bits (169), Expect = 5e-13
Identities = 43/131 (32%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Frame = +1
Query: 268 TGSPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIAT 447
T +P + + PTREL +++ R+ A V +Q L+ ++++ T
Sbjct: 786 TQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGT 845
Query: 448 PGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQC----SPKRQTMLFS 615
PGRL D I L ++ L+LDEADRMLD F ++ I+ +RQT++FS
Sbjct: 846 PGRLTDFIEK-GKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFS 904
Query: 616 ATMXEEXKDLA 648
AT EE + LA
Sbjct: 905 ATFPEEIQRLA 915
Score = 37.5 bits (83), Expect = 0.014
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 239
SF NL + + + PTP+Q +IPI + G+DV ++LP++
Sbjct: 712 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSGKTAAFLLPVMT 771
Query: 240 RLL 248
++
Sbjct: 772 SMM 774
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 68.9 bits (161), Expect = 5e-12
Identities = 43/90 (47%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Frame = +1
Query: 391 DVKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKE 570
D+ Q L +N +++ATPGRL+D + + GL SI LVLDEADRMLD F Q++
Sbjct: 964 DIGSQLRELDRNCHLLVATPGRLVD-MMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRR 1022
Query: 571 IIRQCS-PK---RQTMLFSATMXEEXKDLA 648
I+ Q S PK RQT++FSAT +E + LA
Sbjct: 1023 IVDQDSMPKTGIRQTLMFSATFPKEIQMLA 1052
Score = 33.5 bits (73), Expect = 0.23
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +3
Query: 63 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 242
F +++L L+ +G + PTP+Q IPI +D+ +++PIL R
Sbjct: 877 FEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQTGSGKTAAFLIPILSR 936
Query: 243 L 245
+
Sbjct: 937 I 937
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 67.7 bits (158), Expect = 1e-11
Identities = 34/74 (45%), Positives = 44/74 (59%)
Frame = +3
Query: 33 EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXX 212
E P DE + Y+ +A+ L F+HPTPIQA+TIP+AL+GKDV
Sbjct: 2 EARPSDEVLNAYDSLDEEAEDRAVNELGFLHPTPIQASTIPVALMGKDVCACAATGTGKT 61
Query: 213 XXYMLPILERLLYK 254
+MLPILERLLY+
Sbjct: 62 AAFMLPILERLLYR 75
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 66.9 bits (156), Expect = 2e-11
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 10/138 (7%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 465
+V+ PTREL ++H ++ + + Q + L++ +I++ TPGR+ID
Sbjct: 148 IVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 207
Query: 466 HI--RNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI-------IRQC-SPKRQTMLFS 615
+ N LVLDEADRM D F Q+ +I I C P RQT++FS
Sbjct: 208 MLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFS 267
Query: 616 ATMXEEXKDLAAVSLXKP 669
AT + + LA L KP
Sbjct: 268 ATFPRQMEALARKILDKP 285
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +3
Query: 114 NFVHPTPIQAATIPIALLGKDV 179
++ PTPIQA IP+ + G+D+
Sbjct: 124 SYEKPTPIQAQAIPVIMSGRDM 145
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 65.7 bits (153), Expect = 5e-11
Identities = 39/122 (31%), Positives = 56/122 (45%)
Frame = +1
Query: 259 KEGTGSPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIV 438
K G LVL PTREL ++ V L + +V+ L + +V
Sbjct: 154 KNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVV 213
Query: 439 IATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSA 618
+ TPGR+ D I N I++ VLDEAD ML F +Q+ ++ + Q +L SA
Sbjct: 214 VGTPGRVFDMI-NRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSA 272
Query: 619 TM 624
TM
Sbjct: 273 TM 274
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 64.1 bits (149), Expect = 1e-10
Identities = 34/93 (36%), Positives = 49/93 (52%)
Frame = +1
Query: 277 PGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 456
P L+ PTREL +++ R+ + + Q L++ +IV+ATPGR
Sbjct: 591 PIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGR 650
Query: 457 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFA 555
LIDH++ + LH + LV DEADRM D FA
Sbjct: 651 LIDHVK-AKATNLHRVTYLVFDEADRMFDMGFA 682
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 239
SF + +M +I L + PT IQ +PIAL G+D+ ++ P L
Sbjct: 518 SFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALV 577
Query: 240 RLL 248
++
Sbjct: 578 HIM 580
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 63.7 bits (148), Expect = 2e-10
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Frame = +1
Query: 274 SPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPG 453
+P LV+ PTREL +V L + QE+ + D+++ TPG
Sbjct: 147 APKVLVMAPTRELAKQVGNEFENLKSNLEVYCIYGGMPYEP--QENAINSGLDVLVGTPG 204
Query: 454 RLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII-----RQCSPKRQTMLFSA 618
R++D +R + L ++ +VLDE DRMLD FAE ++E++ K QT+LFSA
Sbjct: 205 RILDFMRQG-TLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSA 263
Query: 619 TM 624
T+
Sbjct: 264 TL 265
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 2/79 (2%)
Frame = +3
Query: 15 DSDFFE--EPPPYDENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXX 188
+S+F E EP F +S+ + + + PIQA+T G+DV
Sbjct: 57 ESEFDEGVEPSVAQREGDFSKFRISQKTIDNLEDRGITYLFPIQASTFNYIYDGEDVIGQ 116
Query: 189 XXXXXXXXXXYMLPILERL 245
+ LP++E+L
Sbjct: 117 ARTGTGKTLSFALPLVEKL 135
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR-QNPDI--------V 438
LVLVPTREL + + +L + +K + +LR N DI +
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK--DDILRLYNKDIFVHVVVHVI 176
Query: 439 IATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSA 618
+ATPGR++D ++ + + ++LV+DEAD++L F + +++II+ RQ +LFSA
Sbjct: 177 VATPGRVLDLMKKKLA-DMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSA 235
Query: 619 TMXEEXKDLAAVSLXKP 669
T +D L KP
Sbjct: 236 TFPISVRDFKEKHLRKP 252
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 63 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 242
F + L R L+ I F P+PIQ +IP+AL G+D+ Y++P+LER
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 63.3 bits (147), Expect = 2e-10
Identities = 43/137 (31%), Positives = 70/137 (51%), Gaps = 9/137 (6%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLR-QNPDI--------V 438
LVLVPTREL + + +L + +K + +LR N DI +
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLK--DDILRLYNKDIFVHVVVHVI 176
Query: 439 IATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSA 618
+ATPGR++D ++ + + ++LV+DEAD++L F + +++II+ RQ +LFSA
Sbjct: 177 VATPGRVLDLMKKKLA-DMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSA 235
Query: 619 TMXEEXKDLAAVSLXKP 669
T +D L KP
Sbjct: 236 TFPISVRDFKEKHLRKP 252
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +3
Query: 63 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILER 242
F + L R L+ I F P+PIQ +IP+AL G+D+ Y++P+LER
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLER 108
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Frame = +1
Query: 394 VKYQESVLRQNPDIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEI 573
V Q LR+ D+V+ATPGRL+D L+ I LV+DE DRML EQ+++I
Sbjct: 207 VSTQTIALREGADVVVATPGRLLD---------LYKITYLVMDEPDRMLGMGMEEQLRKI 257
Query: 574 I---RQCSPKRQTMLFSATMXEEXKDLAAVSLXKP 669
+ S RQT+L+SAT+ E + LA ++ P
Sbjct: 258 VGLATGTSRARQTLLWSATLPESLERLARSAVLNP 292
Score = 37.1 bits (82), Expect = 0.019
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 239
SF+++NL L + NF PTPIQ ++ + G+D+ Y LP+
Sbjct: 73 SFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSLPLCM 132
Query: 240 RLLYKA 257
L KA
Sbjct: 133 LLRTKA 138
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.0 bits (129), Expect = 4e-08
Identities = 29/79 (36%), Positives = 50/79 (63%)
Frame = +1
Query: 433 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLF 612
+++ATPGR+++ I + + L + V+DE D ML F +Q+++I+ + S +RQTMLF
Sbjct: 258 VIVATPGRMVEII-SRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLF 316
Query: 613 SATMXEEXKDLAAVSLXKP 669
SAT+ + +A+ L P
Sbjct: 317 SATIPPSIEAMASRLLNAP 335
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 63 FYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 179
F++ + + L K + + + PTPIQ +P+ L G+DV
Sbjct: 198 FFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDV 236
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 55.2 bits (127), Expect = 7e-08
Identities = 26/56 (46%), Positives = 36/56 (64%)
Frame = +1
Query: 502 IEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXKDLAAVSLXKP 669
+E+LVLDEADRMLD F ++ ++ + KRQ +LFSAT ++ K LA L P
Sbjct: 4 VEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNP 59
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 511 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXKDLAAVSLXKP 669
LVLDEADRM+D F E ++ I +RQT+LFSATM ++ ++ A +L KP
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/53 (49%), Positives = 36/53 (67%)
Frame = +1
Query: 511 LVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXEEXKDLAAVSLXKP 669
LVLDEADRM+D F E ++ I +RQT+LFSATM ++ ++ A +L KP
Sbjct: 20 LVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 51.6 bits (118), Expect = 8e-07
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Frame = +1
Query: 430 DIVIATPGRLIDHI-RNTPSFGLHSIEVLVLDEADRMLDE---YFAEQMKEIIRQCS-PK 594
DI++ TP RL+ + + P LH++E L+LDEAD++ +E F EQ+ I + C+ P
Sbjct: 258 DILVTTPNRLVHLLTQEPPGIELHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPD 317
Query: 595 RQTMLFSATMXEEXKDLAAVSL 660
LFSAT+ ++ A + L
Sbjct: 318 IHRGLFSATLSNGIEEWAGLHL 339
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 51.6 bits (118), Expect = 8e-07
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLA-QFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLI 462
++L PTRE+ +V V + + ++ + L+ + I + TPGR +
Sbjct: 85 IILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALK-SCHIAVGTPGR-V 142
Query: 463 DHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQTMLFSATMXE 630
++ S+ + +LDEAD++LDE F +Q+ I +Q M FSAT E
Sbjct: 143 KYLIEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPE 198
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 48 DENASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 179
+E F+++ LS L++ + F P+PIQ IP+ G D+
Sbjct: 10 EEQIDFHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDL 53
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 48.4 bits (110), Expect = 8e-06
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 433 IVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLD-EYFAEQMKEIIRQCSPKRQTML 609
I+I TPG L+D IR + F + V VLDEAD M+ + +Q I + Q +L
Sbjct: 224 IIIGTPGTLLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLL 283
Query: 610 FSATMXEEXKDLAAVSLXKP 669
FSAT E+ A + P
Sbjct: 284 FSATYDEDVMKFAETVVPNP 303
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 44.8 bits (101), Expect = 9e-05
Identities = 27/100 (27%), Positives = 42/100 (42%)
Frame = +1
Query: 277 PGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 456
P ++VP REL ++ + L K+ L D+++ATPG
Sbjct: 456 PRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGT 515
Query: 457 LIDHIRNTPSFGLHSIEVLVLDEADRMLDEYFAEQMKEII 576
L+ + + F + LV+DEAD M D F EI+
Sbjct: 516 LLKYRQKDRLF-FSDLTHLVIDEADTMFDASFKSLTMEIL 554
Score = 33.9 bits (74), Expect = 0.17
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPILE 239
SF + L ++KA+ +LN PT IQ TIP + V Y+ P++
Sbjct: 379 SFAGLGLRDDVLKALDALNIHQPTVIQMVTIPKIIHRHHVICAAQTGSGKTLAYLAPLVH 438
Query: 240 RL 245
RL
Sbjct: 439 RL 440
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 271 GSPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESVLRQN-PDIVIA 444
G LV+ TREL ++H + ++ ++K + L+ N P IV+
Sbjct: 114 GQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVG 173
Query: 445 TPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE 546
TPGR++ R + L + +LDE D+ML++
Sbjct: 174 TPGRILALTRE-KTLNLKHAKHFILDECDKMLEQ 206
Score = 34.7 bits (76), Expect = 0.100
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 54 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 233
++ F + L L++AI F HP+ +Q IP A+LG D+ ++L
Sbjct: 46 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLAT 105
Query: 234 LERL 245
L++L
Sbjct: 106 LQQL 109
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 271 GSPGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXX-DVKYQESVLRQN-PDIVIA 444
G LV+ TREL ++H + ++ ++K + L+ N P IV+
Sbjct: 114 GQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVG 173
Query: 445 TPGRLIDHIRNTPSFGLHSIEVLVLDEADRMLDE 546
TPGR++ R + L + +LDE D+ML++
Sbjct: 174 TPGRILALTRE-KTLNLKHAKHFILDECDKMLEQ 206
Score = 34.7 bits (76), Expect = 0.100
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +3
Query: 54 NASFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPI 233
++ F + L L++AI F HP+ +Q IP A+LG D+ ++L
Sbjct: 46 SSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLAT 105
Query: 234 LERL 245
L++L
Sbjct: 106 LQQL 109
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 465
L++ PTREL +V + A++ Q+ +L+Q P+IV+ATPGRL +
Sbjct: 222 LIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWE 281
Query: 466 HIRNTPSFG 492
I + G
Sbjct: 282 LISQVFTHG 290
Score = 34.3 bits (75), Expect = 0.13
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Frame = +3
Query: 72 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALL-GKDVXXXXXXXXXXXXXYMLPILERL- 245
+ ++ +++A+G F PTPIQ+ +IP ALL +D+ + +PI++ +
Sbjct: 135 LGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIPIIQHIE 194
Query: 246 LYKAKGGDR 272
YK + ++
Sbjct: 195 AYKKRKAEQ 203
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 430 DIVIATPGRLIDHIRNTPSFGLHSIEVLVLDEADRML 540
DIV TPG+L D I T LH ++ +LDEAD +L
Sbjct: 137 DIVTGTPGKLNDFI-TTDKISLHQVKFFILDEADGLL 172
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 36.7 bits (81), Expect = 0.025
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +1
Query: 499 SIEVLVLDEADRMLDEYFAEQMKEIIRQCSPKRQ 600
SI++LVLDEAD ML++ F EQ+ ++ R P Q
Sbjct: 35 SIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 36.3 bits (80), Expect = 0.033
Identities = 28/83 (33%), Positives = 40/83 (48%)
Frame = +1
Query: 286 LVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGRLID 465
L+L PTREL + ++L +F + SV+ D V+ATPGR +
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGL-------------KSSVILGG-DSVVATPGRFL- 399
Query: 466 HIRNTPSFGLHSIEVLVLDEADR 534
H+ L S+E +V DEADR
Sbjct: 400 HVVMEMELKLSSVEYVVFDEADR 422
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 35.1 bits (77), Expect = 0.075
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Frame = +1
Query: 280 GXLVLVPTRELGAR-VHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQN---PDIVIAT 447
G +++VPTREL ++ ++ V+R L D+ QE +L+ + P IVI T
Sbjct: 227 GTIIVVPTRELASQMLYEVSRLLGD--KSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGT 284
Query: 448 PGRLIDHIRNTPSFGLHSIEVLVLDEADRML 540
P RL + ++ + +V+DE D+ L
Sbjct: 285 PKRLWEIVQEHEHL-FQRTKRIVIDEVDKTL 314
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 33.5 bits (73), Expect = 0.23
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 60 SFYNMNLSRPLMKAIGSLNFVHPTPIQAATIPIALLGKDV 179
SF NL + + + PTP+Q +IPI + G+DV
Sbjct: 135 SFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDV 174
>SB_17696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 119
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +3
Query: 72 MNLSRPLMKAIGSLNFVHPTPIQAATIPIALL 167
+ ++ +++A+G F PTPIQ+ +IP ALL
Sbjct: 77 LGVAPDILRALGDQGFSKPTPIQSLSIPPALL 108
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 31.5 bits (68), Expect = 0.93
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 90 LMKAIGSLNFVHPTPIQAATIPIALLGKDVXXXXXXXXXXXXXYMLPIL 236
+++ + L + PTPIQ IPI L +D+ + +P+L
Sbjct: 112 ILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFAIPLL 160
>SB_24613| Best HMM Match : Ctr (HMM E-Value=0.73)
Length = 895
Score = 29.5 bits (63), Expect = 3.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 517 LDEADRMLDEYFAEQMKEIIRQCSPK 594
LDEAD+M+D YF E + ++ K
Sbjct: 388 LDEADKMIDAYFREMQRRLMEDIKNK 413
>SB_5249| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 29.5 bits (63), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 272 DHQGSWYLCQLENLVLGSMQSQDNWLSSHRCLW 370
D QG+ LC L ++ +WLS+HR LW
Sbjct: 99 DFQGNAVLCDTLRQYLPALMVWFDWLSTHRNLW 131
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 28.3 bits (60), Expect = 8.7
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +1
Query: 277 PGXLVLVPTRELGARVHAVTRQLAQFXXXXXXXXXXXXDVKYQESVLRQNPDIVIATPGR 456
P LVL PTREL ++ V L + ++ L IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 457 L 459
+
Sbjct: 64 V 64
>SB_9809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 469 IRNTPSFGLHSIEVLV-LDEADRMLDEYFAEQMKEIIRQ 582
+R TP F L + + + +A R+LD A ++K +IR+
Sbjct: 29 MRLTPGFNLIKVNAIADIKDAKRLLDLLLARKVKHVIRE 67
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,948,719
Number of Sequences: 59808
Number of extensions: 535941
Number of successful extensions: 1357
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1323
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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