Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H21
(875 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 63 2e-10
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 63 3e-10
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 63 3e-10
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 3e-09
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 59 5e-09
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 56 5e-08
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 54 2e-07
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 3e-07
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 53 4e-07
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 52 8e-07
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 1e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 50 2e-06
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 50 3e-06
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 45 7e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 42 7e-04
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 42 7e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 42 9e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 41 0.001
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 41 0.002
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.005
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 38 0.011
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.013
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 38 0.014
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 38 0.014
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.043
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.075
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 35 0.075
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 34 0.13
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 32 0.53
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 32 0.70
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.70
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 32 0.70
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.2
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 31 1.6
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.6
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 30 2.1
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 30 2.1
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 30 2.1
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.1
SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 30 2.8
SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043) 30 2.8
SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06) 30 2.8
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.9
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29) 29 6.5
SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11) 28 8.6
SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_43823| Best HMM Match : MAM (HMM E-Value=0) 28 8.6
SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8) 28 8.6
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Frame = +1
Query: 265 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD----YVLRARVSNNGSV 429
W + LSWNA E+G S + ++LW+PD+ L N A ++A + + +VS+ G
Sbjct: 119 WKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSLYGFKAKIKVSHTGLN 178
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVID--KRIYSMFXSGXWD 603
W+ ++T + + +P D Q+CT KFGS +++ +D I +G WD
Sbjct: 179 MWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPTASIKGYQQNGEWD 238
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 62.9 bits (146), Expect = 3e-10
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +1
Query: 187 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 363
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 364 NAAATTAG--DYVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHN 537
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS +
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGSWSTS 140
Query: 538 SDEMD 552
MD
Sbjct: 141 LRYMD 145
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 62.9 bits (146), Expect = 3e-10
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
++ LL Y +++ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 286 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYVLRARVSNN------GSVSWIKR 444
WN ++G + ++ +R+W+PDV+L N A+T L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 445 LDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
I + + + +P D+Q+C FGS H+ ++D
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/88 (23%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +1
Query: 121 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 285
+++ L Y +++ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 286 WNAGEW-GCSTWLVSSERLWRPDVVLLN 366
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Frame = +1
Query: 205 HANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 378
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 379 TAGD---YVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDE 546
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS ++ E
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGSWAYDGFE 317
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 58.8 bits (136), Expect = 5e-09
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Frame = +1
Query: 232 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN-AAATTAGDYVLR 402
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ G V
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 403 AR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDF-VIDKR 570
V +NG V W+ + + + M + ++P D Q C KF S + E+ +D
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFASWTGSQSELRLDAMDND 151
Query: 571 IYSMF-XSGXWDV 606
+ + S WD+
Sbjct: 152 VRQNYSESSEWDL 164
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 58.8 bits (136), Expect = 5e-09
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYVLRARV------ 411
+++ W D L+WN ++G + V +W+PD++L N A+T L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 412 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDK 567
S++GS +W+ I T + + +P D+Q C KFGS H+ ++D + K
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 55.6 bits (128), Expect = 5e-08
Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 13/122 (10%)
Frame = +1
Query: 238 RILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD------ 390
+++ + + W + LSWNA E+ G S VS +R W PD++L N+ +A +
Sbjct: 16 KLIRIIAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGG 75
Query: 391 ----YVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFV 558
Y + + +NG SW+ + + +P D Q CT +FGS ++ ++D
Sbjct: 76 GTEKYKTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQ 135
Query: 559 ID 564
ID
Sbjct: 136 ID 137
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/126 (26%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYVL--RARVSN 417
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVI--DKRIYSMF-X 588
NG W +I + ++ + +P D Q C KFGS ++ +++ D S +
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGSWSYSGRQLNLTSKGDSADLSKYTK 183
Query: 589 SGXWDV 606
SG WD+
Sbjct: 184 SGEWDL 189
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 54.0 bits (124), Expect = 2e-07
Identities = 30/127 (23%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYV-LRARVSNNGSV 429
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFXSGX 597
W + T ++ + ++P D Q C FGS H+ +E++ + D++ + +G
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGE 121
Query: 598 WDVTDLS 618
W + +++
Sbjct: 122 WQIQNIT 128
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 53.2 bits (122), Expect = 3e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +1
Query: 196 HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 372
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 373 ATT-AGD---YVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 52.8 bits (121), Expect = 4e-07
Identities = 29/125 (23%), Positives = 61/125 (48%), Gaps = 8/125 (6%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYVLRARVSN 417
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDK---RIYSMFX 588
+G+ +W+ +T + + +P D Q C KFGS ++++ +D ++ I
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVDIFPEEDQASIKGYQK 163
Query: 589 SGXWD 603
+G WD
Sbjct: 164 NGEWD 168
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 52.4 bits (120), Expect = 5e-07
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YVLRARVSN 417
+ + W + L+W+ +G T + V R+WRPD++L N A T G + + ++
Sbjct: 75 IDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYTKVQLKF 134
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFV----IDKRIYSMF 585
+GS W+ + + + +P D Q+C KFGS ++ ++ V D I
Sbjct: 135 DGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGSWTYDGLRLNIVPENGTDIGIDKFV 194
Query: 586 XSGXWDVTDLS 618
+G W++T +S
Sbjct: 195 SNGEWELTGVS 205
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 52.0 bits (119), Expect = 6e-07
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 8/126 (6%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN----AAATTAGDYVLRAR--VSNNGS 426
W D L W+ ++ S + +W PDV L+N G + A V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKR--IYSMFXSGXW 600
V WI + ++ ++++ WP D Q CT F S + E+ +D + W
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMDNSGLTTGHLSNNEW 523
Query: 601 DVTDLS 618
D+ +++
Sbjct: 524 DILNIT 529
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 51.6 bits (118), Expect = 8e-07
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 8/122 (6%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYVLRARVSNNGSV 429
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDF---VIDKRIYSMFXSGXW 600
W+ + S+ ++++ +P D Q C+ KFGS + +D + +G W
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGSWTFDGFHLDLKPEAPQASLSKFIPNGEW 159
Query: 601 DV 606
D+
Sbjct: 160 DL 161
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Frame = +1
Query: 235 VRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YVL 399
+ I+ + + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y
Sbjct: 39 MEIVQIVNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKT 98
Query: 400 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
+S +GS +W + + + +P D QTC KFGS + ++D
Sbjct: 99 HVIISKDGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGSWTYTIADVD 149
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 50.0 bits (114), Expect = 2e-06
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +1
Query: 256 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGD---YVLRARVS 414
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 415 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEM 549
N G W + + SM L WP D QTC KFGS + S+ M
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 49.6 bits (113), Expect = 3e-06
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +1
Query: 256 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYVLRARVS--NN 420
+ W D L W+ + G T + V LW+PD+VL N Y+ +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 421 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
G + W + T + + +P D QTC FGS +N ++D
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----TTAGDYVLRARVSN 417
L+M W D L WN ++G T + + + +W P V++ N A + R V +
Sbjct: 547 LRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGESITSSNTPRPVVRS 606
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
+G+V W+ I + + + +P D Q C FGS ++ ++D
Sbjct: 607 DGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 46.0 bits (104), Expect = 4e-05
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Frame = +1
Query: 151 RESPPDS---KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTW 318
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 319 LVSS----ERLWRPDVVLLNAAATTAGD----YVLRA-RVSNNGSVSWIKRLDISTPISM 471
+ +++W+PD L N AG V + RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 472 QLDNWPNDMQTCTFKFGSGMHNSDEMDFVI-DKRIY 576
+ N+P D Q+C S DE+ ++ D RIY
Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIY 222
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 45.2 bits (102), Expect = 7e-05
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 9/127 (7%)
Frame = +1
Query: 265 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATTA----GDYVLRA--RVSNNG 423
W D L W ++ + S + +W PDV L+N A + G + + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 424 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVID--KRIYSMFXSGX 597
V W+ ++ +++ WP D Q CT F S ++ E+ D + +
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTYDDQEIIIETDDSELTRDHLHNSQ 121
Query: 598 WDVTDLS 618
WD+ +++
Sbjct: 122 WDIINIT 128
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Frame = +1
Query: 133 LLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 297
L TY+++ P D + V L L L ++ + T+ ++ ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 298 EW-GCSTWLVSSERLWRPDVVLLNAA 372
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 259 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 372
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 41.9 bits (94), Expect = 7e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDF--VIDKRIYS- 579
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 80
Query: 580 -MFXSGXWDVTDLS 618
SG WD+ ++S
Sbjct: 81 RFMQSGDWDIKEVS 94
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 41.9 bits (94), Expect = 7e-04
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDF--VIDKRIYS- 579
V+N G V W + S+++ WP D+Q C+ FGS + + ++ + D Y+
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGSFIFPASALNVTSLYDSSFYTD 161
Query: 580 -MFXSGXWDVTDLS 618
SG WD+ ++S
Sbjct: 162 RFMQSGDWDIKEVS 175
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 41.5 bits (93), Expect = 9e-04
Identities = 29/93 (31%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSS--ERLWRPDVVLLNAAATTA----GDYVLRARVSNNGS 426
W DKRL AG+ S L S W+PD NA + D R + +G
Sbjct: 273 WTDKRL---AGKLNLSITLTGSAASNAWKPDPYCYNARQSNMMLEDKDVNSRLSIDPDGK 329
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
+ + + + I M L ++P D Q C KFGS
Sbjct: 330 IFYSRGVSIVASCEMDLHDFPLDTQNCYLKFGS 362
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 510
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 511 FKFGS 525
F S
Sbjct: 86 ISFES 90
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 40.7 bits (91), Expect = 0.002
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 4/149 (2%)
Frame = +1
Query: 121 MIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSW 288
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 289 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYVLRARVSNNGSVSWIKRLDISTPIS 468
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 469 MQLDNWPNDMQTCTFKFGSGMHNSDEMDF 555
M L N+P D+Q C+ S + ++DF
Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQIDF 223
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.1 bits (87), Expect = 0.005
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +1
Query: 265 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYVLRARVS--NNGS 426
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 427 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 525
V + + I+ M+L ++P D Q C K GS
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGS 101
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 39.1 bits (87), Expect = 0.005
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYVLRARVSNN 420
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 421 GSVSWIKRLDISTPISMQLDNWPNDMQ 501
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 232 TVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 366
T+R+ ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.013
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 LADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
+ DLQ W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1467 IVDLQ--WENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 28.3 bits (60), Expect(2) = 0.013
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 484 WPNDMQTCTFKFGSGMHNSDEMD 552
+P D Q C KFGS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 37.5 bits (83), Expect = 0.014
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = +1
Query: 400 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVID--KRI 573
+ +VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D I
Sbjct: 16 KIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVDIDTSPTASI 75
Query: 574 YSMFXSGXWD 603
+G WD
Sbjct: 76 KGYQQNGEWD 85
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQM 261
++ L L+ D Y++ P D + V + + + + + ++L ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 262 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 366
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 35.9 bits (79), Expect = 0.043
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 418 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDK---RIYSMFX 588
NG W+ + +++ + + +P D Q C+ KFGS ++ + +D V + +
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLVSESPSGDVSKYVP 81
Query: 589 SGXWDVTDLS 618
SG WD+ +
Sbjct: 82 SGQWDLVSFT 91
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 35.1 bits (77), Expect = 0.075
Identities = 18/65 (27%), Positives = 31/65 (47%)
Frame = +1
Query: 364 NAAATTAGDYVLRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSD 543
N A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 544 EMDFV 558
E++ V
Sbjct: 65 EVNIV 69
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 35.1 bits (77), Expect = 0.075
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +1
Query: 400 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDF 555
+A V +NG W +I + + + +P D Q C KFGS + +++F
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Frame = +1
Query: 415 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMH-----NSDEMDFVIDKRIYS 579
+NG+ W + + +++ +P D QTC KFGS H + M+ R Y
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLDMSPMNLTFPTRYYQ 266
Query: 580 MFXSGXWDVTDLSXXGA 630
+G W + D+ G+
Sbjct: 267 --KNGEWSIYDIDIVGS 281
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 33.5 bits (73), Expect = 0.23
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Frame = +1
Query: 97 ENATSLSLMIDSLLATYDRESPP---DSKIVVNLTLHLRH-ANIRESESTVRILADLQMN 264
E A + + +D L ++ D+ P +VV + +++ + I + +++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 265 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYVLRARVSNNGSV 429
W D RL+++ E + +W PD + N ++T +Y+L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 430 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEM 549
R+ ++ M L +P D QTC S ++D +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 32.3 bits (70), Expect = 0.53
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
+ + G + W + T + + +P D QTC FGS +N ++D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 337 LWRPDVVLLNAAATT--AGDYVLRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 504
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 505 CTFKFGS 525
C FGS
Sbjct: 77 CNLVFGS 83
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 31.9 bits (69), Expect = 0.70
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 172 KIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRP 348
K +V LH + A + S S VR+ +++ W + L WN ++G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 349 DVVLLN 366
D+VL N
Sbjct: 127 DIVLYN 132
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 31.9 bits (69), Expect = 0.70
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +1
Query: 337 LWRPDVVLLNAAATT--AGDYVLRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 504
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 505 CTFKFGS 525
C FGS
Sbjct: 204 CNLVFGS 210
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 31.9 bits (69), Expect = 0.70
Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = +1
Query: 451 ISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKR----IYSMFXSGXWDVTDLS 618
+ T ++ + ++P D Q C FGS H+ +E++ + D++ + +G W + +++
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTRVKNGEWQIQNIT 64
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 31.1 bits (67), Expect = 1.2
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 121 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 294
+++ LL YDR P + V +TL L T+ + D+ W + L+WN
Sbjct: 15 LLEKLLTGYDRNERPVLNDNESVTVTLGL----------TLNQIVDVI--WYNPLLTWNV 62
Query: 295 GEWG-CSTWLVSSERLWRPDVVL 360
E+G T VS +W PD+VL
Sbjct: 63 TEYGGLKTINVSPTIIWLPDIVL 85
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Frame = +1
Query: 313 TWLVSSERLWRPDVVLLNAAATTAGDYVL-RARVSNNG 423
TWL+ +WRPD+VL +A D VL R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.6
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 406 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 516
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKR---IYS 579
+ ++G+ SW +I + + + +P D Q+C FGS + + ++ V + +
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLVNARNQSDLSK 69
Query: 580 MFXSGXWDV 606
SG W++
Sbjct: 70 YTISGEWEL 78
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 415 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKR---IYSMF 585
N G++ W + + + + +P D Q C+ FGS + S+ + I ++ +
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQKEPDLSKYT 71
Query: 586 XSGXWDV 606
+G W++
Sbjct: 72 PNGQWEM 78
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAAT-----TAGDYVLRARVSNNGSVSWIKRLDISTPISMQLDNWPND 495
+ +W P NA T +Y+L + NG V + RL I+ + L +P+D
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLM--IKPNGDVFYSVRLTITMACKLTLQMFPHD 89
Query: 496 MQTC 507
+Q C
Sbjct: 90 VQVC 93
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1
Query: 265 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 366
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_24860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 29.9 bits (64), Expect = 2.8
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Frame = +1
Query: 145 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 309
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 310 STWLVSSERLWRPDVVLLNAAATTAGDYVLRARVSNN----GSVSWIKRLDISTPISMQL 477
+ E++WRPD NA A + D VL VS GS + + S L
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVD-VLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNL 131
Query: 478 DNWP 489
+ WP
Sbjct: 132 EFWP 135
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = +1
Query: 337 LWRPDVVLLNAAATTAGDYVL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 507
+W PD V ++A+ + ++ + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_14966| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.00043)
Length = 137
Score = 29.9 bits (64), Expect = 2.8
Identities = 35/124 (28%), Positives = 51/124 (41%), Gaps = 9/124 (7%)
Frame = +1
Query: 145 YDRESPP--DSKIVVNLTLHLRHAN---IRESESTVRILADLQMNWIDKRLSWNAGEWGC 309
YD+ P D+ V L + + N I E V + ++ NW D RL+ N +
Sbjct: 14 YDKTERPGVDTGKPVELGVDIHFDNFGRIEEMNMEVDVFLYMRYNWKDPRLA-NFTDKTI 72
Query: 310 STWLVSSERLWRPDVVLLNAAATTAGDYVLRARVSNN----GSVSWIKRLDISTPISMQL 477
+ E++WRPD NA A + D VL VS GS + + S L
Sbjct: 73 TFTRGDIEKVWRPDTYCSNAHAYSDVD-VLYHWVSQKEFSVGSRDMAQFYVLGAQPSTNL 131
Query: 478 DNWP 489
+ WP
Sbjct: 132 EFWP 135
>SB_37132| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8e-06)
Length = 229
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRESPPD-SKIVVNLTLHLRHANIRE-SESTVRILAD--LQMNW 267
NA +LS+ I+ LA+YDR+ P+ + V + + + + E E+ + D L+ W
Sbjct: 15 NAHNLSVFINDALASYDRKVRPNYGGLPVMVLIEFKVISFGEIQEANMEYSFDIFLRQWW 74
Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYVLRARVSNNGSVSW 435
D R N E + ++ W PD N + +V A N+ W
Sbjct: 75 YDPRFKSNFTE-PFTMAADPTKMFWTPDTYFWNVKRSKY-HHVTHAYTKNDLDYKW 128
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +1
Query: 253 LQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 366
+ W D L WN G V +W PD+ L+N
Sbjct: 28 IYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 222 LTNVSMSQMQGQVDYDFGVGGRLPIVRCEERVDHE 118
L+++S +G VD FGV + +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
>SB_54188| Best HMM Match : Neur_chan_memb (HMM E-Value=2.8e-29)
Length = 355
Score = 28.7 bits (61), Expect = 6.5
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 457 TPISMQLDNWPNDMQTCTFKFGSGMHNSDEMDFVIDKRIYSM----FXSGXWDV 606
T + + ++P D Q C FG+ ++ +E++ + +KR+ ++ +G W V
Sbjct: 7 TMCKIDVTDFPFDSQRCPITFGAWQYDQNEVNLINNKRLATVASTRVENGEWTV 60
>SB_27831| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.6e-11)
Length = 350
Score = 28.3 bits (60), Expect = 8.6
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYVL-RARVSNN---GSVSWIKRLDISTPISMQLDNWPNDM 498
+R W PD +N+ T + +V N G + RL M L +P D+
Sbjct: 33 DRFWIPDTFFVNSVDTEIHKMISPNKKVWLNLDQGHIMLSTRLKSRATCKMDLRKYPMDL 92
Query: 499 QTCTFKFGSGMHNSDEMDFVIDKRIYS 579
QTC S + +++ + K + S
Sbjct: 93 QTCHLALESFSFDEEDLMYEWKKPVGS 119
>SB_45168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 409 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSGMHNSDEMD 552
+S++G+ +W + + S+ + +P D Q CT FGS ++ +D
Sbjct: 28 LSSDGTNTWYAPSILRSRCSIDITFFPFDDQRCTLHFGSWTYDGLRVD 75
>SB_43823| Best HMM Match : MAM (HMM E-Value=0)
Length = 1724
Score = 28.3 bits (60), Expect = 8.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 535 CASQNRT*TCKSACRWANCLTA*KLEC*CPSAL 437
C+S N T TCK + W+ + + KL CP+ L
Sbjct: 1517 CSSNNGTRTCKCSPSWSGSVCS-KLNITCPAGL 1548
>SB_35258| Best HMM Match : LEA_4 (HMM E-Value=1.8)
Length = 291
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = -1
Query: 224 DSRMLACLKCRVRLTTILESGGDSRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNKN 45
++R C R TT+ ++ ++R+ V +++ I R + H+ + + +RN
Sbjct: 106 NTRTTVCKAQRNTRTTVCKAQRNTRTTVCKAQHITRTTVYMAQHNTRTTVYKAQRNTRTT 165
Query: 44 NISRRHFMTTDLF 6
+H T ++
Sbjct: 166 VYKAQHITRTTVY 178
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,165,247
Number of Sequences: 59808
Number of extensions: 513188
Number of successful extensions: 1359
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 1235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1326
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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