BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BmNP01_FL5_H19 (809 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 69 5e-14 DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 67 2e-13 DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 66 4e-13 DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 65 6e-13 DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 65 6e-13 DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 65 6e-13 EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 65 8e-13 DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 65 8e-13 EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 64 1e-12 AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 64 1e-12 EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12 EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 63 3e-12 EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 62 4e-12 EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 62 4e-12 DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 62 6e-12 DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 61 1e-11 DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 60 2e-11 AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 60 2e-11 DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 60 3e-11 AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 55 7e-10 DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 54 1e-09 DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 52 8e-09 DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 49 6e-08 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 47 2e-07 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07 DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 38 1e-04 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 38 1e-04 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 38 1e-04 DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 38 1e-04 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 1e-04 DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 4e-04 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 34 0.002 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.013 DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 30 0.029 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.4 >AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic acetylcholine receptorApisa2 subunit protein. Length = 541 Score = 68.9 bits (161), Expect = 5e-14 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 9/168 (5%) Frame = +2 Query: 68 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 226 I SA C + D LL+ Y+R P S +VV L L L N+++ T Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68 Query: 227 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 400 + L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126 Query: 401 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 + G V W + + + +P D QTC KFGS ++ ++D Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174 >DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine receptor beta1subunit protein. Length = 520 Score = 67.3 bits (157), Expect = 2e-13 Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 11/156 (7%) Frame = +2 Query: 164 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 337 K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+ Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110 Query: 338 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 505 PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167 Query: 506 KFGSRMHNSDEMDFVI--DKRIYSM---FESXAWDV 598 KFGS N D++ + +K + ++S WD+ Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203 >DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine receptor alpha9subunit protein. Length = 431 Score = 66.1 bits (154), Expect = 4e-13 Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%) Frame = +2 Query: 89 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 256 ++ T+L + L YD + P S +I N+T+ L + + S + + + + + Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98 Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 424 W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158 Query: 425 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 574 + + + +WP D C FGS +H+ +E++ +DK+ + M Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208 >DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel protein. Length = 463 Score = 65.3 bits (152), Expect = 6e-13 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 7/149 (4%) Frame = +2 Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 259 N +++S ++D+LL YD PD V + + +R I E + T + + +W Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61 Query: 260 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 430 +D+RL++ G+ + + R+W+PD N + T R+ +G V + Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121 Query: 431 KRLDISTPISMQLDNWPNDMQTCTFKFGS 517 RL I M L+N+P D Q C +FGS Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150 >DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 65.3 bits (152), Expect = 6e-13 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211 >DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine receptor alpha6subunit protein. Length = 529 Score = 65.3 bits (152), Expect = 6e-13 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211 >EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 1 protein. Length = 461 Score = 64.9 bits (151), Expect = 8e-13 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine receptor alpha3subunit protein. Length = 566 Score = 64.9 bits (151), Expect = 8e-13 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%) Frame = +2 Query: 86 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 244 C + D LL+ Y++ P + LT+ ++ N++ T + Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76 Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 418 ++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136 Query: 419 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 V W + + ++ +P D QTC KFGS ++ ++D Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178 >EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 2 protein. Length = 461 Score = 64.1 bits (149), Expect = 1e-12 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic acetylcholine receptoralpha-3 protein. Length = 537 Score = 64.1 bits (149), Expect = 1e-12 Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 12/156 (7%) Frame = +2 Query: 113 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 271 + D LL+ Y+R P LT+ L N++ T + ++ W D + Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94 Query: 272 LSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKR 436 L WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPP 151 Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 + + ++ +P D Q+C KFGS +N ++D Sbjct: 152 AIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187 >EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 6 protein. Length = 461 Score = 63.7 bits (148), Expect = 2e-12 Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 4 protein. Length = 461 Score = 62.9 bits (146), Expect = 3e-12 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 5 protein. Length = 461 Score = 62.5 bits (145), Expect = 4e-12 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine receptor subunitalpha 6 transcript variant 3 protein. Length = 461 Score = 62.5 bits (145), Expect = 4e-12 Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 376 ++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84 Query: 377 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 553 G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+ Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143 >DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 62.1 bits (144), Expect = 6e-12 Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 7/151 (4%) Frame = +2 Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277 + D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91 Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 451 W E+G L V S+ +WRPD+VL N A A +A + + G V W + Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151 Query: 452 PISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 + ++ +P D QTC KFGS ++ ++D Sbjct: 152 SCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182 >DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine receptor alpha1subunit protein. Length = 601 Score = 60.9 bits (141), Expect = 1e-11 Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 12/174 (6%) Frame = +2 Query: 59 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 217 +C +A + + D LL+ Y+R P ++ V + L L N++ Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65 Query: 218 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 391 T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y + Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120 Query: 392 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 +A + + G V W + + ++ +P D QTC KFGS ++ +D Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 60.1 bits (139), Expect = 2e-11 Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 10/162 (6%) Frame = +2 Query: 86 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 250 C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+ Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87 Query: 251 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 421 + W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++ Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147 Query: 422 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSDEM 541 + TP+ + D+ WP D+ CT S H S+E+ Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEI 187 >AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic acetylcholine receptoralpha7-1 protein. Length = 555 Score = 60.1 bits (139), Expect = 2e-11 Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 11/189 (5%) Frame = +2 Query: 65 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 229 A+A++ + +++ LL TY+ P +V++ L L ++ E + Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70 Query: 230 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARV 403 L++ W D + WN ++G L + RLW+PDV++ N+A G Y V Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130 Query: 404 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYS 571 NNG+ ++ + + + +P D Q C KFGS ++ ++D + I S Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISS 190 Query: 572 MFESXAWDV 598 + WD+ Sbjct: 191 FITNGEWDL 199 >DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine receptor alpha4subunit protein. Length = 569 Score = 59.7 bits (138), Expect = 3e-11 Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 10/154 (6%) Frame = +2 Query: 113 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 277 + D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91 Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 442 W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAV 148 Query: 443 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 544 + S+ ++ +P D+QTC K GS ++ ++D Sbjct: 149 YKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182 >AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic acetylcholine Apisa7-2 subunit protein. Length = 461 Score = 55.2 bits (127), Expect = 7e-10 Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%) Frame = +2 Query: 167 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 343 +V L+LH ++ E + + W D L WNA E+ G V R+WRPD Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91 Query: 344 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517 +L N A + V S+ G V W+ + + ++ +P D Q C K+ S Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151 Query: 518 RMHNSDEMD 544 ++ +++ Sbjct: 152 WTYDGYQLE 160 >DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 510 Score = 54.4 bits (125), Expect = 1e-09 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 8/147 (5%) Frame = +2 Query: 101 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 265 ++++++++LL Y+ + P + VV + +R + E + + + +W D Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95 Query: 266 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 436 RLS+ S + ER+WRPD N + + R+S +G + + R Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155 Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGS 517 L I M+L N+P D Q+C GS Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182 >DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 51.6 bits (118), Expect = 8e-09 Identities = 40/158 (25%), Positives = 71/158 (44%), Gaps = 12/158 (7%) Frame = +2 Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 271 ++D++L YD P D +V + L +R A I + + +Q + W+D+R Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94 Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 436 L +N G T L + R+W PD+ N + + R+ NGSV + R Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153 Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 550 + ++ M L +P D Q C+ + S +D++ F+ Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191 >DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride channel protein. Length = 447 Score = 48.8 bits (111), Expect = 6e-08 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 12/158 (7%) Frame = +2 Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 271 ++D++L YD P D VV + + +R + I + +Q + W+D+R Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94 Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 436 L +N G T L + R+W PD+ N + + R+ NGSV + R Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153 Query: 437 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 550 + ++ M L +P D Q C+ + S +D++ F+ Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVFL 191 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 47.2 bits (107), Expect = 2e-07 Identities = 40/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%) Frame = +2 Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 259 N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67 Query: 260 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 412 D RL++ G T V SE +W PD +N ATT+ ++ R+ ++ Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123 Query: 413 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517 GS++ RL I+ M L +P D Q C + S Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 46.0 bits (104), Expect = 4e-07 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%) Frame = +2 Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANIRESESTVRIQADLQMNW 259 N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67 Query: 260 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 412 D RL++ G T V SE +W PD +N ATT+ ++ R+ ++ Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123 Query: 413 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517 GS++ RL I+ M L +P D Q C + S Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158 >DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel protein. Length = 489 Score = 41.1 bits (92), Expect = 1e-05 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%) Frame = +2 Query: 206 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 385 I E I L W D+RL+++ E + +E++W PD N + D Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134 Query: 386 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517 R R+S +GSV++ R + M L +P D Q CT + S Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 37.9 bits (84), Expect = 1e-04 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%) Frame = +2 Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253 E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115 Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424 W D RL + N ++ + + +W PD ++ R+ NG+V+ Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175 Query: 425 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 550 ++ R + +L+ +P D C+F S + + +V Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 37.9 bits (84), Expect = 1e-04 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%) Frame = +2 Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253 E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115 Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424 W D RL + N ++ + + +W PD ++ R+ NG+V+ Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175 Query: 425 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 550 ++ R + +L+ +P D C+F S + + +V Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 37.9 bits (84), Expect = 1e-04 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 8/162 (4%) Frame = +2 Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANIRESESTVRIQADLQM 253 E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115 Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424 W D RL + N ++ + + +W PD ++ R+ NG+V+ Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175 Query: 425 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 550 ++ R + +L+ +P D C+F S + + +V Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217 >DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride channel protein. Length = 383 Score = 37.5 bits (83), Expect = 1e-04 Identities = 26/121 (21%), Positives = 53/121 (43%), Gaps = 5/121 (4%) Frame = +2 Query: 203 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTA 376 +I E T L +W D RL N E + +WRPD NA T Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102 Query: 377 GDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 547 + ++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162 Query: 548 V 550 + Sbjct: 163 I 163 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 37.5 bits (83), Expect = 1e-04 Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%) Frame = +2 Query: 257 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 409 W D RL++ G T V SE +W PD +N ATT+ ++ R+ + Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61 Query: 410 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 517 +GS++ RL I+ M L +P D Q C + S Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97 >DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride channel protein. Length = 428 Score = 35.9 bits (79), Expect = 4e-04 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%) Frame = +2 Query: 323 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 493 + +WRPD NA + T + + + ++ ++ +L + +M +P+D Q Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175 Query: 494 TCTFKFGSRMHNSDEMDFVID 556 C + S H +DEM F D Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 33.9 bits (74), Expect = 0.002 Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 4/132 (3%) Frame = +2 Query: 167 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 340 + VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196 Query: 341 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 514 D ++ R+ NG+V+++ R + +L+ +P D C+F Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256 Query: 515 SRMHNSDEMDFV 550 S + + +V Sbjct: 257 SISYEQTAITYV 268 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 31.1 bits (67), Expect = 0.013 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%) Frame = +2 Query: 329 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 499 +W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156 Query: 500 TFKFGSRMHNSDEM 541 F S HN +M Sbjct: 157 PLIFESWTHNVLDM 170 >DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 391 Score = 29.9 bits (64), Expect = 0.029 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%) Frame = +2 Query: 167 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 328 ++V+ + + N I + R+ ++ +WI+ RL + G+ + + Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70 Query: 329 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 493 LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128 Query: 494 TCTFKFGSRMHNSDEM 541 C S ++ ++ Sbjct: 129 ICPIYIESFSYHKQKL 144 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 22.6 bits (46), Expect = 4.4 Identities = 8/14 (57%), Positives = 10/14 (71%) Frame = -2 Query: 310 PSAAAPLPCVPTQS 269 PSA AP+P +P S Sbjct: 411 PSAGAPMPPIPNMS 424 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 195,694 Number of Sequences: 438 Number of extensions: 4154 Number of successful extensions: 93 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 49 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 53 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 25731924 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -