Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_H18
         (906 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118603-1|AAM49972.1|  747|Drosophila melanogaster LP04371p pro...    32   0.94 
AE014296-2125|AAF49933.1|  747|Drosophila melanogaster CG10426-P...    32   0.94 
AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p pro...    31   2.2  
AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA...    31   2.2  
BT030245-1|ABN49384.1|  167|Drosophila melanogaster IP18301p pro...    30   5.0  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.8  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.8  

>AY118603-1|AAM49972.1|  747|Drosophila melanogaster LP04371p
           protein.
          Length = 747

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLDAVLKRSSRRGFKASGCHQRLHQRI 709
           +P S   SA  +  ++  F    +P   S S+   +++  RS  R    S C  RL  ++
Sbjct: 215 RPSSECASAPESPVASKTFFAHCSPAAASASVARSESLQNRSPIRPMAVSACRSRLRLKL 274

Query: 710 SPP 718
            PP
Sbjct: 275 YPP 277


>AE014296-2125|AAF49933.1|  747|Drosophila melanogaster CG10426-PA
           protein.
          Length = 747

 Score = 32.3 bits (70), Expect = 0.94
 Identities = 17/63 (26%), Positives = 28/63 (44%)
 Frame = +2

Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLDAVLKRSSRRGFKASGCHQRLHQRI 709
           +P S   SA  +  ++  F    +P   S S+   +++  RS  R    S C  RL  ++
Sbjct: 215 RPSSECASAPESPVASKTFFAHCSPAAASASVARSESLQNRSPIRPMAVSACRSRLRLKL 274

Query: 710 SPP 718
            PP
Sbjct: 275 YPP 277


>AY084165-1|AAL89903.1|  525|Drosophila melanogaster RE39081p
           protein.
          Length = 525

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 593 PTTPDLTSISINPLDAVLKRSSRRGFKASGCHQRLHQRISPPS 721
           P  P LT+ S   + + L  S  +   +S  HQR HQR SPP+
Sbjct: 10  PPPPPLTASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSPPA 52


>AE014296-1347|AAF50503.1|  525|Drosophila melanogaster CG8254-PA
           protein.
          Length = 525

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 593 PTTPDLTSISINPLDAVLKRSSRRGFKASGCHQRLHQRISPPS 721
           P  P LT+ S   + + L  S  +   +S  HQR HQR SPP+
Sbjct: 10  PPPPPLTASSSTSMPSQLLLSHIQHHSSSLHHQRSHQRSSPPA 52


>BT030245-1|ABN49384.1|  167|Drosophila melanogaster IP18301p
           protein.
          Length = 167

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 22/59 (37%), Positives = 27/59 (45%)
 Frame = +2

Query: 551 SATSTRSSNPRFHTPTTPDLTSISINPLDAVLKRSSRRGFKASGCHQRLHQRISPPSFT 727
           S   T S N R  +P T D  SIS     +   R +RRG KASG  ++   R    S T
Sbjct: 57  SKRKTNSRNNRGRSPRTKDDRSISPASSTSSTSRGARRG-KASGTPRKTPARRKKDSIT 114


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,360,225
Number of Sequences: 53049
Number of extensions: 884457
Number of successful extensions: 3033
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3032
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4423507848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)