Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H15
(854 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 41 0.001
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 39 0.005
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 39 0.005
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 38 0.006
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 38 0.006
At1g16110.1 68414.m01931 wall-associated kinase, putative contai... 38 0.009
At1g16150.1 68414.m01935 wall-associated kinase, putative contai... 37 0.020
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 37 0.020
At1g79670.2 68414.m09292 wall-associated kinase, putative simila... 36 0.026
At1g79670.1 68414.m09291 wall-associated kinase, putative simila... 36 0.026
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 36 0.026
At1g21210.1 68414.m02651 wall-associated kinase 4 36 0.026
At1g16160.1 68414.m01936 protein kinase family protein contains ... 36 0.034
At1g16130.1 68414.m01933 wall-associated kinase, putative simila... 36 0.034
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 35 0.079
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 35 0.079
At1g16260.1 68414.m01947 protein kinase family protein contains ... 34 0.10
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 33 0.24
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 33 0.32
At4g31100.1 68417.m04414 wall-associated kinase, putative 32 0.42
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 32 0.42
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 31 0.74
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 30 1.7
At3g26550.1 68416.m03314 DC1 domain-containing protein contains ... 29 3.0
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 29 3.0
At1g01880.1 68414.m00106 DNA repair protein, putative similar to... 29 3.9
At5g46660.1 68418.m05749 CHP-rich zinc finger protein, putative ... 28 6.9
At5g37870.1 68418.m04561 seven in absentia (SINA) family protein... 28 9.1
At1g52870.2 68414.m05978 peroxisomal membrane protein-related co... 28 9.1
At1g52870.1 68414.m05977 peroxisomal membrane protein-related co... 28 9.1
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 41.1 bits (92), Expect = 0.001
Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +3
Query: 360 QGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQR--CVNDPGSFHCECSP 533
+G+ C C GF N Y C D++EC T C C N GSFHC+C
Sbjct: 255 RGKGYNCKCLQGFDGNP--YLSDG---CQDINECTTRIHNCSDTSTCENTLGSFHCQCPS 309
Query: 534 PLSLASDGKKCV 569
L + C+
Sbjct: 310 GSDLNTTTMSCI 321
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 348 ACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG-GC-EQRCVNDPGSFHC 521
AC V +S+ C C PGF+ + K C D++EC C E C N GS+ C
Sbjct: 492 AC-VDKDSVKCECPPGFK--GDGVKK-----CEDINECKEKKACQCPECSCKNTWGSYEC 543
Query: 522 ECSPPLSLASDGKKCVPR 575
CS L D C+ +
Sbjct: 544 SCSGDLLYMRDHDTCISK 561
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = +3
Query: 360 QGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGC--EQR-------CVNDPGS 512
+G+ C G +F + YS E C NNGGC E+R CV D S
Sbjct: 443 RGKVCVCPIVDGVRFKGDGYSHCEPS---GPGRCTINNGGCWHEERDGHAFSACV-DKDS 498
Query: 513 FHCECSPPLSLASDG-KKC 566
CEC P DG KKC
Sbjct: 499 VKCECPP--GFKGDGVKKC 515
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 348 ACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG-GC-EQRCVNDPGSFHC 521
AC V +S+ C C PGF+ + K C D++EC C E C N GS+ C
Sbjct: 492 AC-VDKDSVKCECPPGFK--GDGVKK-----CEDINECKEKKACQCPECSCKNTWGSYEC 543
Query: 522 ECSPPLSLASDGKKCVPR 575
CS L D C+ +
Sbjct: 544 SCSGDLLYMRDHDTCISK 561
Score = 33.1 bits (72), Expect = 0.24
Identities = 28/79 (35%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Frame = +3
Query: 360 QGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGC--EQR-------CVNDPGS 512
+G+ C G +F + YS E C NNGGC E+R CV D S
Sbjct: 443 RGKVCVCPIVDGVRFKGDGYSHCEPS---GPGRCTINNGGCWHEERDGHAFSACV-DKDS 498
Query: 513 FHCECSPPLSLASDG-KKC 566
CEC P DG KKC
Sbjct: 499 VKCECPP--GFKGDGVKKC 515
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 348 ACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG-GC-EQRCVNDPGSFHC 521
AC V +S+ C C PGF+ + +K+ C D++EC C E C N GS+ C
Sbjct: 492 AC-VDKDSVKCECPPGFKGDG---TKK----CEDINECKEKKACQCPECSCKNTWGSYEC 543
Query: 522 ECSPPLSLASDGKKCVPR 575
CS L D C+ +
Sbjct: 544 SCSGDLLYIRDHDTCISK 561
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Frame = +3
Query: 360 QGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGC--EQR-------CVNDPGS 512
+G C G QF + YS E C NNGGC E+R CV D S
Sbjct: 443 RGRVCECPTVDGVQFKGDGYSHCEPS---GPGRCTINNGGCWHEERDGHAFSACV-DKDS 498
Query: 513 FHCECSPPLSLASDG-KKC 566
CEC P DG KKC
Sbjct: 499 VKCECPP--GFKGDGTKKC 515
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 38.3 bits (85), Expect = 0.006
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Frame = +3
Query: 348 ACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG-GC-EQRCVNDPGSFHC 521
AC V +S+ C C PGF+ + +K+ C D++EC C E C N GS+ C
Sbjct: 492 AC-VDKDSVKCECPPGFKGDG---TKK----CEDINECKEKKACQCPECSCKNTWGSYEC 543
Query: 522 ECSPPLSLASDGKKCVPR 575
CS L D C+ +
Sbjct: 544 SCSGDLLYIRDHDTCISK 561
Score = 34.3 bits (75), Expect = 0.10
Identities = 29/79 (36%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Frame = +3
Query: 360 QGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGC--EQR-------CVNDPGS 512
+G C G QF + YS E C NNGGC E+R CV D S
Sbjct: 443 RGRVCECPTVDGVQFKGDGYSHCEPS---GPGRCTINNGGCWHEERDGHAFSACV-DKDS 498
Query: 513 FHCECSPPLSLASDG-KKC 566
CEC P DG KKC
Sbjct: 499 VKCECPP--GFKGDGTKKC 515
>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
similarity to wall-associated kinase 2 GI:4826399 from
[Arabidopsis thaliana]
Length = 642
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 384 CYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQRCVNDPGSFHCE 524
CY + + Y + C+D+DEC ++ E CVN PG+ CE
Sbjct: 304 CYCNYGYTGNPYLRHG---CIDIDECEGHHNCGEGTCVNMPGTHSCE 347
>At1g16150.1 68414.m01935 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 779
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/35 (51%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 441 CVDVDECATNNGG--C-EQRCVNDPGSFHCECSPP 536
CVD+DEC G C +Q CVN PG F CE P
Sbjct: 310 CVDIDECKLEIGRKRCKDQSCVNKPGWFTCEPKKP 344
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 36.7 bits (81), Expect = 0.020
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +3
Query: 381 SCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQRCVNDPGSFHC--ECSPPLSLA 548
SCY G + Y + C+D+DEC N E CVN G + C + + P LA
Sbjct: 271 SCYCGSGYRGNPYIRGG---CIDIDECEVPNKCGEDTCVNMAGRYSCVPKITKPAKLA 325
>At1g79670.2 68414.m09292 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 714
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 441 CVDVDECATNNG--GC-EQRCVNDPGSFHCE 524
C+D+DEC G C E CVN PGS+ CE
Sbjct: 270 CIDIDECEEGKGLSSCGELTCVNVPGSWRCE 300
>At1g79670.1 68414.m09291 wall-associated kinase, putative similar
to wall-associated kinase 4 GI:3355308 from [Arabidopsis
thaliana]; isoform contains non-consensus AT-acceptor
splice site.
Length = 751
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Frame = +3
Query: 441 CVDVDECATNNG--GC-EQRCVNDPGSFHCE 524
C+D+DEC G C E CVN PGS+ CE
Sbjct: 307 CIDIDECEEGKGLSSCGELTCVNVPGSWRCE 337
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 36.3 bits (80), Expect = 0.026
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +3
Query: 378 CSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQR--CVNDPGSFHCEC 527
C C GF+ N Y C D++EC ++ C + C N GSF+C C
Sbjct: 260 CKCLEGFEGNP--YLPNG---CQDINECISSRHNCSEHSTCENTKGSFNCNC 306
>At1g21210.1 68414.m02651 wall-associated kinase 4
Length = 738
Score = 36.3 bits (80), Expect = 0.026
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 7/91 (7%)
Frame = +3
Query: 324 CSLN-LCEQACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG----GC-- 482
C +N +C + G C C GFQ N Q C D++EC T N C
Sbjct: 244 CGVNGICSNSAS--GIGYTCKCKGGFQGNPYL-----QNGCQDINECTTANPIHKHNCSG 296
Query: 483 EQRCVNDPGSFHCECSPPLSLASDGKKCVPR 575
+ C N G F C C L + C P+
Sbjct: 297 DSTCENKLGHFRCNCRSRYELNTTTNTCKPK 327
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 366 ESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQRCVNDPGSFHCECSPPL 539
E + +CY F Y + C+D D+C N E CVN PG + C+ P +
Sbjct: 274 EMSYRNCYCSLGFTGNPYLRGG---CIDNDDCKGPNICEEGTCVNVPGGYRCDPKPKI 328
>At1g16130.1 68414.m01933 wall-associated kinase, putative similar
to putative serine/threonine-specific protein kinase
GI:7270012 from [Arabidopsis thaliana]
Length = 748
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Frame = +3
Query: 441 CVDVDECATNNGG--C-EQRCVNDPGSFHCECSPPLSL 545
CVDVDEC + G C +Q CVN PG F C+ P L
Sbjct: 302 CVDVDECKLDIGRNQCKDQSCVNLPGWFDCQPKKPEQL 339
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 34.7 bits (76), Expect = 0.079
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +3
Query: 366 ESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNG----GCEQRCVNDPGSFHCECSP 533
E+ C C PGF K + C D+DEC + GC C N G F C+CS
Sbjct: 494 ETSGCRCPPGF--------KGDGLKCEDIDECKEQSACQCDGCN--CKNKWGGFECKCSG 543
Query: 534 PLSLASDGKKCVPR 575
+ C+ R
Sbjct: 544 NRLYMKEQDTCIER 557
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 34.7 bits (76), Expect = 0.079
Identities = 26/83 (31%), Positives = 32/83 (38%), Gaps = 14/83 (16%)
Frame = +3
Query: 345 QACEVQGESMWC----SCYPGFQFNAESYSKQE----QPY----CVDVDECATNNGGCE- 485
Q CE G + C SCY N E PY C D+DEC ++ C
Sbjct: 247 QTCEQAGSTRICGKNSSCYNSTTRNGYICKCNEGYDGNPYRSEGCKDIDECISDTHNCSD 306
Query: 486 -QRCVNDPGSFHCECSPPLSLAS 551
+ C N G F C+C L S
Sbjct: 307 PKTCRNRDGGFDCKCPSGYDLNS 329
>At1g16260.1 68414.m01947 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 34.3 bits (75), Expect = 0.10
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 366 ESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNN-GGCEQR-CVNDPGSFHCECSPPL 539
+S CSC+ G++ N C D+DEC + C +R CVN GS+ CE + P
Sbjct: 262 DSYQCSCHNGYEGNPYIPGG-----CQDIDECRDPHLNKCGKRKCVNVLGSYRCEKTWPA 316
Query: 540 SLA 548
L+
Sbjct: 317 ILS 319
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = +3
Query: 369 SMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNN----GGCEQRCVNDPGSFHCECSPP 536
S C C GFQ + + C D++EC + GC RC N G + C CS
Sbjct: 496 STGCKCPEGFQGDGLT--------CEDINECKERSVCQCSGC--RCKNSWGGYKCSCSGD 545
Query: 537 LSLASDGKKCVPR 575
+D C+ R
Sbjct: 546 RLYINDQDTCIER 558
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 32.7 bits (71), Expect = 0.32
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = +3
Query: 348 ACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQR---CVNDPGSFH 518
AC S C C PGF + K+ C DV+EC C+ R C N GS+
Sbjct: 491 ACR-DDHSKGCKCPPGFIGDG---LKE----CKDVNECEEKTA-CQCRDCKCKNTWGSYE 541
Query: 519 CECSPPLSLASDGKKCVPR 575
C CS L + C+ R
Sbjct: 542 CSCSGSLLYIREHDICINR 560
>At4g31100.1 68417.m04414 wall-associated kinase, putative
Length = 786
Score = 32.3 bits (70), Expect = 0.42
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +3
Query: 336 LCEQACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDVDECATNNGGCEQ--RCVNDPG 509
+C+ + + + +C + Y C D+DEC N C++ CVN G
Sbjct: 302 ICDYTMSIISDIRYANCECNLGYKGNPYDSDG---CRDIDECKENPKYCKETDTCVNFEG 358
Query: 510 SFHC 521
+ C
Sbjct: 359 GYRC 362
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 32.3 bits (70), Expect = 0.42
Identities = 41/161 (25%), Positives = 60/161 (37%), Gaps = 6/161 (3%)
Frame = +3
Query: 105 CYHDDSG-YRAEEPHLTDTIDVIDSSTARCPTDLVLRSRQTCRVGDADVQCVR---LHCC 272
C ++ G ++ + ++T D CPT ++ VGD C LHC
Sbjct: 415 CLENNGGCWQDKAANITACRDTFRGRLCECPTVQGVKF-----VGDGYTHCKASGALHCG 469
Query: 273 DTHQHVAGRCIPKSMEPCSLNLCEQACEVQGESMWCSCYPGFQFNAESYSKQEQPYCVDV 452
+ G C +S + + C V S C C GF+ + C DV
Sbjct: 470 INN----GGCWRESRGGFTYSAC-----VDDHSKDCKCPLGFKGDGVKN-------CEDV 513
Query: 453 DECATNNG-GC-EQRCVNDPGSFHCECSPPLSLASDGKKCV 569
DEC C E +C N GS+ C CS L + C+
Sbjct: 514 DECKEKTVCQCPECKCKNTWGSYECSCSNGLLYMREHDTCI 554
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 31.5 bits (68), Expect = 0.74
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 441 CVDVDECATNNG----GCEQRCVNDPGSFHCECSPPLSLASDGKKCVPR 575
C D+DEC + GC +C N+ G + C+CS + C+ R
Sbjct: 510 CEDIDECKEKSACKCDGC--KCKNNWGGYECKCSNNSIYMKEEDTCIER 556
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 6/33 (18%)
Frame = +3
Query: 441 CVDVDECATNNGGCEQR------CVNDPGSFHC 521
C D++EC N+ G Q CVN PG+F+C
Sbjct: 337 CKDINECLRNSYGQRQNCRESDTCVNLPGTFNC 369
>At3g26550.1 68416.m03314 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 681
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -1
Query: 281 VCIAAVQP-HALYVGVPHATRLPRPQHQVSWAS 186
+CI V H +G PH R+ R QH++S+AS
Sbjct: 248 ICIQCVFVIHKDCMGYPHVIRISRHQHRISFAS 280
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +3
Query: 378 CSCYPGFQFNAESYSKQEQPYCVDVDECATNNG----GCE--QRCVNDPGSFHCECSPPL 539
C C GF N + C DV+EC T++ C + C N G F+C+C
Sbjct: 264 CRCNEGFDGNPYLSAG-----CQDVNECTTSSTIHRHNCSDPKTCRNKVGGFYCKCQSGY 318
Query: 540 SLASDGKKC 566
L + C
Sbjct: 319 RLDTTTMSC 327
>At1g01880.1 68414.m00106 DNA repair protein, putative similar to
Swiss-Prot:P28706 DNA repair protein rad13
[Schizosaccharomyces pombe]; similar to UV
hypersensitive protein [Arabidopsis thaliana]
gi|13649704|gb|AAK37472
Length = 570
Score = 29.1 bits (62), Expect = 3.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 477 GCEQRCVNDPGSFHCECS 530
GC+ C+ P F CECS
Sbjct: 299 GCDSGCIKKPLGFRCECS 316
>At5g46660.1 68418.m05749 CHP-rich zinc finger protein, putative
contains similarity to CHP-rich zinc finger protein
Length = 305
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -1
Query: 299 PSSDVLVCIAAVQPHALYVGVPHATRLPRPQHQVSWAS 186
P+ + C+ + H + G PH R+ R H++S+ S
Sbjct: 247 PTYICIECVFVIHEHCM--GFPHVIRISRHNHRISFTS 282
>At5g37870.1 68418.m04561 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 281
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -3
Query: 201 GQLGIALCCYLLRRWCQ*GAVPPLCIRCRRGSRV 100
G L + CC LR C A+P IRCR RV
Sbjct: 62 GHLACSSCCPKLRNKCPACALPVGHIRCRAMERV 95
>At1g52870.2 68414.m05978 peroxisomal membrane protein-related
contains weak similarity to Swiss-Prot:Q07066 22 kDa
peroxisomal membrane protein [Rattus norvegicus]
Length = 366
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 266 LLRYTPTRRWTVYSEINGAVQSEPV*ASMRSAGREYVV 379
+LRY P W Y E A++ PV A M +G Y V
Sbjct: 161 ILRYAPQHNWIAYEE---ALKQNPVLAKMVISGVVYSV 195
>At1g52870.1 68414.m05977 peroxisomal membrane protein-related
contains weak similarity to Swiss-Prot:Q07066 22 kDa
peroxisomal membrane protein [Rattus norvegicus]
Length = 306
Score = 27.9 bits (59), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 266 LLRYTPTRRWTVYSEINGAVQSEPV*ASMRSAGREYVV 379
+LRY P W Y E A++ PV A M +G Y V
Sbjct: 161 ILRYAPQHNWIAYEE---ALKQNPVLAKMVISGVVYSV 195
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,919,936
Number of Sequences: 28952
Number of extensions: 392885
Number of successful extensions: 1142
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1989897600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -