Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H12
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0073 - 25602268-25603182,25603273-25604190 34 0.17
03_06_0129 - 31883732-31883854,31883989-31884051,31884213-318842... 33 0.23
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.30
12_01_0927 + 9196230-9196427,9196499-9197190,9197317-9198351,919... 33 0.40
05_03_0475 + 14486969-14487140,14487215-14487338,14487424-144875... 33 0.40
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 32 0.70
09_03_0074 + 12103454-12103613,12104102-12104183,12105145-121052... 31 1.2
04_04_1164 - 31413577-31414080,31414435-31414647 31 1.2
01_06_1107 + 34568091-34568341,34568455-34568540,34569204-345692... 31 1.2
07_03_0502 + 18826595-18826660,18826815-18826885,18828963-188290... 31 1.6
04_03_1030 + 21838282-21838593 31 1.6
12_02_1182 + 26751345-26751836 30 2.1
07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213 30 2.1
01_06_1324 + 36304444-36304749 30 2.1
01_06_0317 + 28425408-28426079,28426286-28426351 30 2.1
06_01_0824 - 6219477-6219556,6220427-6220808,6221415-6221448,622... 30 2.8
05_07_0108 + 27735783-27736205 30 2.8
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871... 30 2.8
08_02_0678 - 19971416-19971930,19971970-19973347,19974122-199745... 29 3.8
09_02_0349 - 7632140-7632234,7632348-7632449,7632864-7632962,763... 29 5.0
06_03_0701 - 23655762-23655857,23656067-23656141,23656245-236563... 29 5.0
05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306 29 5.0
05_01_0406 + 3197189-3197389,3197491-3197628,3198463-3198544,319... 29 5.0
03_05_0780 + 27646936-27647084,27647168-27647289,27649380-276494... 29 5.0
02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420 29 5.0
10_08_0785 - 20536265-20537032 29 6.6
05_02_0070 - 6327352-6327582,6327684-6327944 29 6.6
06_03_0345 + 19758188-19758382,19759857-19759952,19760061-197601... 28 8.7
05_01_0126 + 858259-858489,858641-859189,859545-860162 28 8.7
04_01_0365 - 4796780-4796971,4797246-4797327,4797417-4797527,479... 28 8.7
02_05_0996 - 33380363-33380597,33380767-33380851,33381206-333815... 28 8.7
02_05_0841 + 32129863-32130294,32130395-32130459,32130565-321307... 28 8.7
02_05_0171 - 26441007-26441918 28 8.7
02_01_0300 + 2007414-2007665,2009268-2009320,2009409-2009453,200... 28 8.7
>02_05_0073 - 25602268-25603182,25603273-25604190
Length = 610
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 436 PWCPCWRHGQIDDTACSPST*RRSSRG-MVASGGTCGRSAGESHIRVATSAGIRTMTLSM 612
PW P W ++ T + S R ++ G V G+ + S + + + +
Sbjct: 502 PWTPSWEPNSVESTDRTWSASRSTNNGDEVVEQGSSSHAGARSPLNRSRQSSKQRAAQPE 561
Query: 613 HSKRARVGSARGETSS 660
HS R+R GS+ G +++
Sbjct: 562 HSVRSRAGSSGGNSNN 577
>03_06_0129 -
31883732-31883854,31883989-31884051,31884213-31884272,
31884724-31884784,31884934-31885004,31885313-31885389,
31885856-31885913,31885995-31886048,31886279-31886297,
31886359-31886466,31886574-31886690,31886836-31886919,
31887079-31887171,31887279-31887499,31888294-31888371,
31889237-31889499,31890109-31890247
Length = 562
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = -2
Query: 558 LSCRPSTGTSRSNHAPRGPALS--GRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAPPA 385
L R T+ S+ AP P L A P+ A GPRGC ++ G PA
Sbjct: 2 LFARRPLATAASHLAPFSPPLLLFFASASSSCSSAASPSSASGPRGCSAVRMETGAVEPA 61
Query: 384 TAPSTWRTP 358
+ + W TP
Sbjct: 62 STGAIWSTP 70
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.30
Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -2
Query: 459 MPPARAPGPRGCVGE*LKFGQAPPATAP--STWRTPDDAQHASTDRQPTGRASVPDSGTV 286
+PP APG +G KF PP P S+ RTP A +S P +P +
Sbjct: 650 VPPPPAPG----IGN--KFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRT 703
Query: 285 FCAGIPQLLPQPRDPKEGNQ 226
G+P P P P N+
Sbjct: 704 NGPGVPSAPPPPPPPPPANR 723
>12_01_0927 +
9196230-9196427,9196499-9197190,9197317-9198351,
9198437-9198688,9198769-9198879,9198969-9199050,
9199325-9199516
Length = 853
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = -2
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P L APPA PS +P Q A ++ P G S P S T+
Sbjct: 436 PPLPAPQPVQASPTSLAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLE 494
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 495 LSRIIPKLISTYDPKE 510
>05_03_0475 +
14486969-14487140,14487215-14487338,14487424-14487559,
14487663-14488997
Length = 588
Score = 32.7 bits (71), Expect = 0.40
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -2
Query: 735 PSXRXWSXSMRAMTARKEXSLPPAPR*GLAASAPNA-GTLRVHAERHRPDARTGGNPDVA 559
P+ WS + A + PP R A+SAP A G R+ R R G P
Sbjct: 104 PASPLWSPATSAAAGHHVSAAPPPSRLERASSAPYAKGNSRLPLTR-----RENGPPASR 158
Query: 558 LSCRPSTGTSRSN---HAPRGPALSGRR 484
LS R S+ TS+ + HAP G SGRR
Sbjct: 159 LS-RSSSATSQLSTVAHAP-GTVFSGRR 184
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = -3
Query: 344 TPPPTDSRRAGRPSPTQGLCSAPVYRSCYLSLEIPRKGTSEGA 216
TPPP RR P P G P R YLS+ + R+G G+
Sbjct: 35 TPPPPPPRRRTPPPPPPGSGPGP-QRPSYLSVALRRRGPPAGS 76
>09_03_0074 +
12103454-12103613,12104102-12104183,12105145-12105200,
12105671-12106048,12106402-12106565
Length = 279
Score = 31.1 bits (67), Expect = 1.2
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -2
Query: 570 PDVALSCRPSTGTSRSNHAPRGPALSGRRARRV-VYLTMPPARAPGPRGCVGE*LKFGQA 394
PD+A R T+ R P L RR RR +PP + G G+A
Sbjct: 128 PDLAEGERLQPATAPPAERRRRPTLLQRRGRRCRAAAALPPVGSGG-----------GRA 176
Query: 393 PPATAPSTWRTPDDAQHASTDRQPTGRASVP 301
PP + S+ RTP H + D T A+ P
Sbjct: 177 PPGSRRSSCRTPTTPTHVADDTD-TDTAAPP 206
>04_04_1164 - 31413577-31414080,31414435-31414647
Length = 238
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = -2
Query: 687 KEXSLPPAPR*GLAASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSNHAPR 508
++ +LPP P AA++ +A + R + T G A + R S TS S+ A
Sbjct: 89 QDLNLPPPPSSAAAAASTSAAVCTLDMVRSALERATAGRSAAAAAARGSPATSSSSSAST 148
Query: 507 GPALS--GRRAR 478
+ S G+R R
Sbjct: 149 SSSSSSIGKRHR 160
>01_06_1107 +
34568091-34568341,34568455-34568540,34569204-34569292,
34569406-34569530,34569825-34569901,34570210-34570862
Length = 426
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -2
Query: 117 RATTRERRTKPYCARPPGTDAGRRRCNHRRWGEDG 13
R+++ T C PP T++G+++ HR+ +DG
Sbjct: 24 RSSSSSSSTASSCIVPPRTESGKKKSKHRKRAKDG 58
>07_03_0502 +
18826595-18826660,18826815-18826885,18828963-18829056,
18829575-18831521
Length = 725
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Frame = +3
Query: 543 KVCRREPHPGCHQCGHPDDDAQHALEACPR----W--ERSRRDLIAVLGGEXSPCG 692
K R EP C CG ++D HAL CP W RS +D+ G S G
Sbjct: 418 KTRRLEPMAICSICGREEEDVAHALCRCPHATNLWLSLRSSKDISFEAGASWSGSG 473
>04_03_1030 + 21838282-21838593
Length = 103
Score = 30.7 bits (66), Expect = 1.6
Identities = 28/91 (30%), Positives = 38/91 (41%)
Frame = +1
Query: 445 PCWRHGQIDDTACSPST*RRSSRGMVASGGTCGRSAGESHIRVATSAGIRTMTLSMHSKR 624
P R G + T C+P+T RR + +AS R A ES A+S R +K
Sbjct: 22 PATRPGATESTGCNPAT-RRGAEASMASSPAKRRDAEES---TASSQAKR-----RGAKG 72
Query: 625 ARVGSARGETSSRCWGERXLLAGCHRPHAXG 717
+ G+ RG + C E RP A G
Sbjct: 73 STAGTGRGPATRPCATESTGCNPATRPGATG 103
>12_02_1182 + 26751345-26751836
Length = 163
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Frame = -2
Query: 126 QRVRATTRERRTKPYCARPPGTDA----GRRRCNHRRW 25
+ V RR +P A+P T GRRRC+ RRW
Sbjct: 66 EMVETKPPSRRPRPSTAKPKKTQEHTGQGRRRCHRRRW 103
>07_01_0279 + 2055310-2055541,2055916-2056235,2056734-2057213
Length = 343
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = -3
Query: 350 RSTPPPTDSRRAGRPSPTQGLCSAPVYRSC 261
R PPP D AGR SP L A V+ C
Sbjct: 161 RLPPPPADDLAAGRSSPPPSLQEAEVWTIC 190
>01_06_1324 + 36304444-36304749
Length = 101
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Frame = +3
Query: 327 VGRWRRAARHLAYAKWRER-------LLEELGQTSVTRRRTLEALVPVLEAWSDRR 473
+G W RH A WR R L EE G+ + RRR L A + V AW++ R
Sbjct: 31 LGSWEGRTRHGVGATWRRRKGSGDGCLAEEEGK-APQRRRKLAARLGVGPAWTEER 85
>01_06_0317 + 28425408-28426079,28426286-28426351
Length = 245
Score = 30.3 bits (65), Expect = 2.1
Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Frame = -2
Query: 672 PPAPR*GLAASAPNAGTLRVHAERHRPDAR--TGGNPDVALSCRPSTGTSRSNHAPRGPA 499
PP P +AA+A A + + RP AR T +P A + R T P A
Sbjct: 131 PPPPDTSVAAAAAAARPWNLRERKRRPSARGSTAASPTTAWARRADTTRGGGERPPFAVA 190
Query: 498 LSGRRARRVVY-LT-MPPARAPGPR 430
L+ +Y LT P R P R
Sbjct: 191 LAAEEIEEDMYALTGGRPRRRPRKR 215
>06_01_0824 -
6219477-6219556,6220427-6220808,6221415-6221448,
6222214-6222370,6224449-6224575,6224663-6224914
Length = 343
Score = 29.9 bits (64), Expect = 2.8
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Frame = -2
Query: 654 GLAASAPNAGTLRVHAERHRP--------DARTGGNPDVA-LSCRPSTGTSRSNHAPRGP 502
GLA P+ G LR H E++ D TG + ++ R + R+ P P
Sbjct: 45 GLAWETPSEG-LRRHFEQYGEILEAVVIADRLTGRSKGYGFVTFREAEAARRAVQDPN-P 102
Query: 501 ALSGRRARRVVYLTMPPARAPGPRGCVGE*LKFGQAPPA 385
++GRRA + PP A PRG +F PPA
Sbjct: 103 MIAGRRANCNIASLGPPRPAQPPRGRASPGAQFQAPPPA 141
>05_07_0108 + 27735783-27736205
Length = 140
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -2
Query: 123 RVRATTRERRTKPYCARPPGTDAGRRRCNHRRWGE 19
R+ +R RR + RPP DAG R RRWG+
Sbjct: 82 RINVVSRIRRER----RPPDDDAGGRGRQRRRWGK 112
>04_02_0026 +
8708765-8710935,8711021-8711272,8711353-8711463,
8711553-8711634,8711909-8712100
Length = 935
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P APPA PS +P Q A ++ P G S P S T+
Sbjct: 518 PPLPAPQPVQASPTSPAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLE 576
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 577 LSRIIPKLISTYDPKE 592
>08_02_0678 - 19971416-19971930,19971970-19973347,19974122-19974518,
19974533-19974645,19977436-19977903,19977935-19978059,
19978192-19978452,19984254-19984647
Length = 1216
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/71 (28%), Positives = 31/71 (43%)
Frame = +3
Query: 438 LVPVLEAWSDRRHGVLSFHLTQVLSGHGCFGRYLWKVCRREPHPGCHQCGHPDDDAQHAL 617
+ P+ E +S LS HLTQ ++ H + R+ H + CG D+D
Sbjct: 810 IAPIREKFSSEDFESLS-HLTQKVTLHEQRFAKARRNSRKVNHVFSYMCGSDDEDDDDPE 868
Query: 618 EACPRWERSRR 650
A W RS++
Sbjct: 869 IATAEWVRSKK 879
>09_02_0349 -
7632140-7632234,7632348-7632449,7632864-7632962,
7633517-7633622,7633897-7633978,7634068-7634178,
7634259-7634510,7634596-7635688,7636157-7636829,
7636920-7637117
Length = 936
Score = 29.1 bits (62), Expect = 5.0
Identities = 26/76 (34%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = -2
Query: 456 PPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVF 283
PP AP P APPA PS +P Q A ++ P G S P S T+
Sbjct: 449 PPLPAPQPVQASPTSPAKQHAPPAP-PSVQTSPPTPQSALVEQVHIPDGITSEPKSNTLE 507
Query: 282 CAGIPQLLPQPRDPKE 235
+ I L DPKE
Sbjct: 508 LSRIIPKLISTYDPKE 523
>06_03_0701 -
23655762-23655857,23656067-23656141,23656245-23656301,
23656385-23656501,23657286-23657405,23657491-23657613,
23657967-23658056,23658184-23658309,23658809-23658901,
23658947-23659021,23659115-23659222,23659481-23659552,
23659673-23659735,23660850-23661017
Length = 460
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 589 CPHWWQPGCGSLLQTFHRYLPKQPCPERTCVKWKEST 479
CP+W+ PG SL+ HR L P T + +E T
Sbjct: 243 CPYWFSPGATSLI---HRILDPNPKTRITIEQIREDT 276
>05_03_0559 - 15460348-15460357,15460966-15461290,15461340-15462306
Length = 433
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Frame = -2
Query: 591 DARTG-------GNPDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGP 433
DARTG G+P A + P +R RG + G RR PPAR P
Sbjct: 62 DARTGAHVAVRQGHPKAAAAALPPMSLARGGR--RGAEVRGAGGRRAPPRARPPARGGAP 119
Query: 432 R 430
R
Sbjct: 120 R 120
>05_01_0406 +
3197189-3197389,3197491-3197628,3198463-3198544,
3198658-3198734,3198829-3198935,3199367-3199505,
3200602-3200718,3200850-3200941,3201096-3201162,
3201249-3201355,3201468-3201546,3201751-3201894,
3202095-3202235
Length = 496
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 275 PAQNTVPE--SGTDARPVGCRSVEACCASSGVRQVEGAVAGGAWPNFSHSP 421
PA + P+ +G + +P S++ + + AGGAWP +HSP
Sbjct: 36 PASSPSPQHPAGAERKPRRVASLDVFRGLTVAMMILVDDAGGAWPGMNHSP 86
>03_05_0780 +
27646936-27647084,27647168-27647289,27649380-27649458,
27650346-27650427,27650483-27650600,27650695-27651050,
27651404-27652222,27652846-27653265,27653426-27653437
Length = 718
Score = 29.1 bits (62), Expect = 5.0
Identities = 25/89 (28%), Positives = 35/89 (39%)
Frame = -2
Query: 699 MTARKEXSLPPAPR*GLAASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSN 520
+T R + P P G A AP AG +R P + + L CRP + R+
Sbjct: 330 LTHRCSTTTQPLPTCGTPAPAPPAGQPSSAEDRATPTGISSSHQGHLLLCRPCL-SHRTG 388
Query: 519 HAPRGPALSGRRARRVVYLTMPPARAPGP 433
R LS R + + P+R P P
Sbjct: 389 LLHR-TRLSHRSGLPPLAAPLAPSRPPSP 416
>02_02_0579 + 11755361-11755545,11755695-11755763,11755904-11756420
Length = 256
Score = 29.1 bits (62), Expect = 5.0
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Frame = -2
Query: 708 MRAMTARKEXSLPPAPR*GLAASAPNAGTLRVHAERHRPDARTGGNPDVALSC------R 547
+R+ + ++ + PP+ GL+ +A + R H+ R RT D A +
Sbjct: 84 VRSPVSAEKTATPPSRLPGLSRAATKSA--RRHSSITRFYTRTAPPSDAARTAISSPAAL 141
Query: 546 PST-GTSRSNHAPRGPALSGRRARRVVYLTMPPARAPGPRG 427
P+T SRS H + A R+ +L PP PGPRG
Sbjct: 142 PATDAASRSPHVGHVGRAAPAAAERLQHL--PPRGVPGPRG 180
>10_08_0785 - 20536265-20537032
Length = 255
Score = 28.7 bits (61), Expect = 6.6
Identities = 22/54 (40%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +2
Query: 320 VGCRSVEACCASSGVRQVEGAVAGGAWPNFSHSPTHPR--GPGARAGGMVR*TT 475
VG +V C + GA AG A P SHSP H G G GG V TT
Sbjct: 56 VGLAAVARCARNRRNSGGAGAGAGSASP--SHSPAHAGHFGGGGSGGGGVTTTT 107
>05_02_0070 - 6327352-6327582,6327684-6327944
Length = 163
Score = 28.7 bits (61), Expect = 6.6
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 402 GQAPPATAPSTWRTPDDAQHASTDRQPTGRASVPD 298
G PP++ PST P A +A+ D QP+ R V D
Sbjct: 13 GSTPPSSLPSTSPPPPPAANATED-QPSSRQLVYD 46
>06_03_0345 +
19758188-19758382,19759857-19759952,19760061-19760144,
19760504-19760573,19760934-19761838,19763661-19764287
Length = 658
Score = 28.3 bits (60), Expect = 8.7
Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Frame = -2
Query: 693 ARKEXSLPPAPR*GLAASAP--------NAGTLRVHAERHRPDARTGGNPDVALSCRPST 538
AR S+PP PR +S P AG+ R A P A P A++ ST
Sbjct: 351 ARARPSIPPLPRRACPSSWPFPTSPKRAAAGSRRGRAPAVEP-AAAAPLPPAAVAAPAST 409
Query: 537 GTSRSNHAPRGPALSGRRARR 475
G SR+ A A+ + RR
Sbjct: 410 GPSRARSAAPTLAVVSEKERR 430
>05_01_0126 + 858259-858489,858641-859189,859545-860162
Length = 465
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 505 SSRGMVASGGTCGRSAGESHIRVATSAGIRTMTLSMHSK-RARVGSARGE 651
S R V +GG +A H+ S IR+ + S HS+ R+ GS+ G+
Sbjct: 244 SWRTTVHTGGRATATASHEHVSRPISGVIRSSSSSSHSRSRSSEGSSSGQ 293
>04_01_0365 -
4796780-4796971,4797246-4797327,4797417-4797527,
4797608-4797859,4797945-4800115
Length = 935
Score = 28.3 bits (60), Expect = 8.7
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = -2
Query: 396 APPATAPSTWRTPDDAQHASTDRQ--PTGRASVPDSGTVFCAGIPQLLPQPRDPKE 235
APPA PS +P Q A ++ P G S P S T+ + I L DPKE
Sbjct: 538 APPAP-PSVQTSPPTPQSALVEQVHIPDGTTSEPKSNTLELSRIIPKLISTYDPKE 592
>02_05_0996 -
33380363-33380597,33380767-33380851,33381206-33381557,
33381690-33382340
Length = 440
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 573 CHQCGHPDDDAQHALEAC---PRWERSRRDLIAVLGGEXSPCGLSSPACXR 716
C CG ++DA H L C +W + R + + G SP LS P R
Sbjct: 195 CVMCGQYNEDAGHLLFKCKPVKKWWKERNE-VREGGTPRSPAKLSHPIMSR 244
>02_05_0841 +
32129863-32130294,32130395-32130459,32130565-32130774,
32130943-32131024
Length = 262
Score = 28.3 bits (60), Expect = 8.7
Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
Frame = -2
Query: 648 AASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSNHAPRGPALSGRRAR-RV 472
AA+ AG R + DA D +L+CR + S H P G A R R
Sbjct: 109 AAAHAAAGLSRCSSTASSVDAAA---QDRSLACRSDVAEAGSEHVPEGSASDSASGRDRE 165
Query: 471 VYLTMPPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQP 322
T P + PG + L GQ PS AQ A+ + P
Sbjct: 166 RRETTPSSFLPGEVSDLESDLAGGQKRSRPLPSA--ATASAQQATRPKIP 213
>02_05_0171 - 26441007-26441918
Length = 303
Score = 28.3 bits (60), Expect = 8.7
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = -2
Query: 648 AASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSNHAPRGPALSGRRARRVV 469
AA+A AG R + + P + +P + S S+ + RG A + A +V
Sbjct: 216 AAAAAAAGNKRPYPD---PASSGSSSPSSSSSSSSSSSSGSPKRRKRGEAAAASMAMALV 272
Query: 468 YLTMPPARAP 439
PPA+AP
Sbjct: 273 PPPPPPAQAP 282
>02_01_0300 +
2007414-2007665,2009268-2009320,2009409-2009453,
2009559-2009661
Length = 150
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 14 PSSPQRRWLQRRRPASVPGGRA--QYGFVRRSRVVA 115
P S Q++ QRRRP V GG A G+V + R+ A
Sbjct: 36 PVSGQQQQQQRRRPTDVGGGAAMRSVGYVGKHRLSA 71
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,124,529
Number of Sequences: 37544
Number of extensions: 714311
Number of successful extensions: 3480
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3146
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3475
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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