Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_H12
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 94 3e-19
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 42 9e-04
U76378-1|AAB18789.1| 1150|Drosophila melanogaster LK6 protein ki... 33 0.69
AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-P... 33 0.69
AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-P... 33 0.69
BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p pro... 31 1.6
AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p pro... 31 1.6
AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto pro... 31 1.6
AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-P... 31 1.6
AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p pro... 30 3.7
AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,... 30 3.7
AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p pro... 29 6.5
AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA... 29 6.5
AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB... 29 6.5
AE014296-449|AAN12221.1| 200|Drosophila melanogaster CG32298-PA... 29 6.5
AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone rece... 29 8.5
AY089676-1|AAL90414.1| 168|Drosophila melanogaster RH48056p pro... 29 8.5
AY071577-1|AAL49199.1| 162|Drosophila melanogaster RE63456p pro... 29 8.5
AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2 ... 29 8.5
AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC... 29 8.5
AE014297-3917|AAN14070.1| 162|Drosophila melanogaster CG6090-PB... 29 8.5
AE014297-3916|AAF56564.2| 162|Drosophila melanogaster CG6090-PA... 29 8.5
AE014297-925|AAN13422.1| 168|Drosophila melanogaster CG9354-PB,... 29 8.5
AE014297-924|AAF54369.1| 168|Drosophila melanogaster CG9354-PA,... 29 8.5
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 93.9 bits (223), Expect = 3e-19
Identities = 72/231 (31%), Positives = 95/231 (41%), Gaps = 1/231 (0%)
Frame = +3
Query: 6 ALARLLPNVGGCSAGVRRLYLGVVRSMALYGAPVWS-PXXXXXXXXXXXXXXXXXXXXXX 182
ALAR++PNVGG RRL + V ++ LY AP+WS
Sbjct: 747 ALARIMPNVGGPRLPARRLLVAVSKATLLYAAPIWSCVSTKKTYLDSARAVSRTMALRLI 806
Query: 183 XGYRTISREVACALAGSLPWDLXXXXXXXXYRRRTQSLSRGRTPGPSAVGRWRRAARHLA 362
G+RTIS + A AL+G P DL TQ + W R
Sbjct: 807 RGFRTISDDAAHALSGITPIDLDIKGKYLASEGYTQL----------EIKEWIRGV---- 852
Query: 363 YAKWRERLLEELGQTSVTRRRTLEALVPVLEAWSDRRHGVLSFHLTQVLSGHGCFGRYLW 542
W+ R E R R L+P L W+D H + +H+TQ L+ HGCF YL
Sbjct: 853 ---WQTRWQES------QRGRWTYKLIPQLTEWADCEHKTVDYHMTQFLTDHGCFRGYLC 903
Query: 543 KVCRREPHPGCHQCGHPDDDAQHALEACPRWERSRRDLIAVLGGEXSPCGL 695
+ R C C + A+H L C R+ R L+A+ G SP GL
Sbjct: 904 RF-RHVDTAQCLYCTDAVETAEHILLHCSRFAEERAQLVALAGSPLSPRGL 953
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 42.3 bits (95), Expect = 9e-04
Identities = 65/230 (28%), Positives = 84/230 (36%), Gaps = 13/230 (5%)
Frame = +3
Query: 6 ALARLLPNVGGCSAGVRR-LYLGVVRSMALYGAPVWSPXXXXXXXXXXXXXXXXXXXXXX 182
ALAR+L G S RR +Y G++ L+GAPVW
Sbjct: 764 ALARVLRADWGFSPRARRTIYDGLMAPCVLFGAPVWYDTAEQVAAQRRLASCQRLILLGC 823
Query: 183 XGY-RTISREVACALAGSLPWDLXXXXXXXXYRRRTQSLSRGRTPGPSAVGRWRRAARHL 359
RT+S L G+ P DL Y+ L RG P W +
Sbjct: 824 LSVCRTVSTVALQVLGGAPPLDLAAKLLAIKYK-----LKRGF---PLEENDWLYG-EDI 874
Query: 360 AYAKWRERL--LEELGQTSVTRR--------RTLEALVP-VLEAWSDRRHGVLSFHLTQV 506
A W +R LEE S R R +P V A+ D G S + +
Sbjct: 875 ACLSWEQRKTRLEECLIQSWQNRWDDDSEPGRVTHRFIPYVTLAYRDPSFG-FSMRTSFL 933
Query: 507 LSGHGCFGRYLWKVCRREPHPGCHQCGHPDDDAQHALEACPRWERSRRDL 656
L+GHG F +L + C CG P +D H L ACP + RDL
Sbjct: 934 LTGHGSFNAFLHGRALSDT-TAC-ACGDPYEDWMHILCACPLY-ADLRDL 980
>U76378-1|AAB18789.1| 1150|Drosophila melanogaster LK6 protein kinase
protein.
Length = 1150
Score = 32.7 bits (71), Expect = 0.69
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -3
Query: 242 PRKGTSEGAGDLPGDRTVPPDDSHREHPLRS*QQSCIARRECGRPHGSAVQSHTAHDPQ 66
PR ++ +G G PP D + +R+ +Q C+ R CG G Q H Q
Sbjct: 1021 PRHNSAGSSGSGSGSGGSPPSDE--QSAIRNWRQDCVYARSCGMNQGPEQQRHNRSSGQ 1077
>AE014297-1373|AAF54695.1| 1090|Drosophila melanogaster CG17342-PB,
isoform B protein.
Length = 1090
Score = 32.7 bits (71), Expect = 0.69
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -3
Query: 242 PRKGTSEGAGDLPGDRTVPPDDSHREHPLRS*QQSCIARRECGRPHGSAVQSHTAHDPQ 66
PR ++ +G G PP D + +R+ +Q C+ R CG G Q H Q
Sbjct: 969 PRHNSAGSSGSGSGSGGSPPSDE--QSAIRNWRQDCVYARSCGMNQGPEQQRHNRSSGQ 1025
>AE014297-1372|AAF54694.1| 1142|Drosophila melanogaster CG17342-PA,
isoform A protein.
Length = 1142
Score = 32.7 bits (71), Expect = 0.69
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = -3
Query: 242 PRKGTSEGAGDLPGDRTVPPDDSHREHPLRS*QQSCIARRECGRPHGSAVQSHTAHDPQ 66
PR ++ +G G PP D + +R+ +Q C+ R CG G Q H Q
Sbjct: 1021 PRHNSAGSSGSGSGSGGSPPSDE--QSAIRNWRQDCVYARSCGMNQGPEQQRHNRSSGQ 1077
>BT003186-1|AAO24941.1| 756|Drosophila melanogaster RE65015p
protein.
Length = 756
Score = 31.5 bits (68), Expect = 1.6
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Frame = -2
Query: 609 AERHRPDARTGGNPDVALSCRPSTGTSRSNHAPRGPALS-GRRARRVVYLTMPPARAPGP 433
A+R +A++ G A RP+ +S P G A S G A + + +PP P P
Sbjct: 54 AKRLARNAQSEGATGAAQQNRPAQ--PQSPGGPGGAASSIGAAAMGMPFQVLPPPPPP-P 110
Query: 432 RGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQPTGRASVPDS-GTVFCAGIPQLLP 256
+ G K G + AP P Q ST PTGR SVP S T + PQ
Sbjct: 111 QPQSG---KNGTQGASAAPP----PPPPQQPSTLAPPTGRLSVPGSPATARKSPTPQRFE 163
Query: 255 QP 250
P
Sbjct: 164 PP 165
>AY051977-1|AAK93401.1| 931|Drosophila melanogaster LD44526p
protein.
Length = 931
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +3
Query: 279 RRTQSLSRGRTPG-PSAVGRW---RRAAR 353
+RT SLSR RTPG PS GRW R AAR
Sbjct: 187 QRTPSLSRARTPGTPSDDGRWPANRGAAR 215
>AY032851-1|AAK51129.1| 960|Drosophila melanogaster Cornetto
protein.
Length = 960
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +3
Query: 279 RRTQSLSRGRTPG-PSAVGRW---RRAAR 353
+RT SLSR RTPG PS GRW R AAR
Sbjct: 216 QRTPSLSRARTPGTPSDDGRWPANRGAAR 244
>AE014296-1202|AAF50605.2| 960|Drosophila melanogaster CG32386-PA
protein.
Length = 960
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/29 (65%), Positives = 20/29 (68%), Gaps = 4/29 (13%)
Frame = +3
Query: 279 RRTQSLSRGRTPG-PSAVGRW---RRAAR 353
+RT SLSR RTPG PS GRW R AAR
Sbjct: 216 QRTPSLSRARTPGTPSDDGRWPANRGAAR 244
>AY119603-1|AAM50257.1| 1103|Drosophila melanogaster LD27161p
protein.
Length = 1103
Score = 30.3 bits (65), Expect = 3.7
Identities = 29/117 (24%), Positives = 46/117 (39%)
Frame = -2
Query: 645 ASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVY 466
AS+P A + R P A P + L+ RPS+ + + N P P + R+ +
Sbjct: 49 ASSPRASPSVSASARRSPSATPKVPPKMLLAKRPSSSSGKVNATPSPPPHATPPTRQPLD 108
Query: 465 LTMPPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQPTGRASVPDS 295
A + G G +K ++P + T T A+ T GR+ DS
Sbjct: 109 KGSVGAGSVGGGGARA--VKTPKSPTSPTTPTTPTSPPAKRLQTSLVSRGRSYSKDS 163
>AE014134-553|AAF51145.2| 2162|Drosophila melanogaster CG9660-PA,
isoform A protein.
Length = 2162
Score = 30.3 bits (65), Expect = 3.7
Identities = 29/117 (24%), Positives = 46/117 (39%)
Frame = -2
Query: 645 ASAPNAGTLRVHAERHRPDARTGGNPDVALSCRPSTGTSRSNHAPRGPALSGRRARRVVY 466
AS+P A + R P A P + L+ RPS+ + + N P P + R+ +
Sbjct: 1108 ASSPRASPSVSASARRSPSATPKVPPKMLLAKRPSSSSGKVNATPSPPPHATPPTRQPLD 1167
Query: 465 LTMPPARAPGPRGCVGE*LKFGQAPPATAPSTWRTPDDAQHASTDRQPTGRASVPDS 295
A + G G +K ++P + T T A+ T GR+ DS
Sbjct: 1168 KGSVGAGSVGGGGARA--VKTPKSPTSPTTPTTPTSPPAKRLQTSLVSRGRSYSKDS 1222
>AY113393-1|AAM29398.1| 891|Drosophila melanogaster RE07247p
protein.
Length = 891
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 507 LSGHGCFGRYLWKVC--RREPHPGCHQCGHPDDDAQHALEA 623
+ G FG Y W V +++P + CG DAQH + A
Sbjct: 645 VDGDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISA 685
>AE014296-2707|AAF49484.2| 891|Drosophila melanogaster CG4998-PA,
isoform A protein.
Length = 891
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 507 LSGHGCFGRYLWKVC--RREPHPGCHQCGHPDDDAQHALEA 623
+ G FG Y W V +++P + CG DAQH + A
Sbjct: 645 VDGDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISA 685
>AE014296-2706|ABI31256.1| 1185|Drosophila melanogaster CG4998-PB,
isoform B protein.
Length = 1185
Score = 29.5 bits (63), Expect = 6.5
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 507 LSGHGCFGRYLWKVC--RREPHPGCHQCGHPDDDAQHALEA 623
+ G FG Y W V +++P + CG DAQH + A
Sbjct: 939 VDGDSEFGEYPWHVAILKKDPKESIYACGGTLIDAQHIISA 979
>AE014296-449|AAN12221.1| 200|Drosophila melanogaster CG32298-PA
protein.
Length = 200
Score = 29.5 bits (63), Expect = 6.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -3
Query: 116 GRPHGSAVQSHTAHDPQVQTPDAG 45
GRP G ++ HT H+ Q +T D G
Sbjct: 174 GRPAGIPIEMHTVHNNQEETADIG 197
>AY971884-1|AAX73355.1| 1518|Drosophila melanogaster hormone
receptor 4 protein.
Length = 1518
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 122 ECGRPHGSAVQSHTAHDPQV--QTPDAGAATTDVGEKTG 12
+C PH S+ S + PQ QTP G T +GE G
Sbjct: 684 QCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722
>AY089676-1|AAL90414.1| 168|Drosophila melanogaster RH48056p
protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
>AY071577-1|AAL49199.1| 162|Drosophila melanogaster RE63456p
protein.
Length = 162
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
>AL035245-2|CAA22836.1| 1464|Drosophila melanogaster EG:133E12.2
protein.
Length = 1464
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 122 ECGRPHGSAVQSHTAHDPQV--QTPDAGAATTDVGEKTG 12
+C PH S+ S + PQ QTP G T +GE G
Sbjct: 629 QCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 667
>AE014298-306|ABC67166.1| 1518|Drosophila melanogaster CG16902-PC
protein.
Length = 1518
Score = 29.1 bits (62), Expect = 8.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = -3
Query: 122 ECGRPHGSAVQSHTAHDPQV--QTPDAGAATTDVGEKTG 12
+C PH S+ S + PQ QTP G T +GE G
Sbjct: 684 QCPSPHPSSSSSSSQLSPQTPSQTPPRGTPTVIMGESCG 722
>AE014297-3917|AAN14070.1| 162|Drosophila melanogaster CG6090-PB,
isoform B protein.
Length = 162
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
>AE014297-3916|AAF56564.2| 162|Drosophila melanogaster CG6090-PA,
isoform A protein.
Length = 162
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
>AE014297-925|AAN13422.1| 168|Drosophila melanogaster CG9354-PB,
isoform B protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
>AE014297-924|AAF54369.1| 168|Drosophila melanogaster CG9354-PA,
isoform A protein.
Length = 168
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 44 RRRPASVPGGRAQYGFVRRSRVVARTLCAQC 136
+RR PGGR Y +V+++ V R C QC
Sbjct: 19 KRRIVRTPGGRLVYQYVKKNPTVPR--CGQC 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,259,026
Number of Sequences: 53049
Number of extensions: 1018245
Number of successful extensions: 4319
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4308
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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