Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_H11
         (900 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0402 - 17304828-17305622                                         30   2.9  
02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    30   2.9  
01_01_1195 - 9567023-9567789,9567871-9568120                           29   3.8  
12_02_0975 + 24991666-24991956,24994303-24994485                       29   5.0  
02_01_0775 + 5775949-5777385                                           29   6.7  
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    28   8.8  
02_01_0716 + 5348720-5349115                                           28   8.8  

>09_04_0402 - 17304828-17305622
          Length = 264

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = +1

Query: 253 GPGQGREKFSALARVRAYMAHGAHCARITRTAWRRRMWVMLAAP 384
           G G+  ++     R  ++ AHG    R  R  WRRR   + +AP
Sbjct: 169 GGGEREKREQQRRRPHSFSAHGPSALREQRERWRRRRGQLSSAP 212


>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 156 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTG 55
           LDDE   YL  R  V   +  RLL+F++VD  STG
Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTG 313


>01_01_1195 - 9567023-9567789,9567871-9568120
          Length = 338

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 622 YNARXESSSTGSSFPADSPKPVPLAVVSLDSR*GHSHH 509
           +  R  SSS+ S  PA +P P P  VV+L     H HH
Sbjct: 157 FRRRKPSSSSASPAPAPAPPPPPQPVVALH----HHHH 190


>12_02_0975 + 24991666-24991956,24994303-24994485
          Length = 157

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 182 RDSHCPYLQFDGISRSEVGPVYHADLVRDEKNFRLLREFAHT 307
           RD    +   D   R  +G    A  +R+E+ FRLL E+A T
Sbjct: 20  RDGELRFAATDDALRVPLGYAIGAPFIRNERIFRLLDEYART 61


>02_01_0775 + 5775949-5777385
          Length = 478

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 256 PGQGREKFSALARVRAYMAHGAHCARITRTAWRRRMWVMLAAPE 387
           PGQG    +     R   A GAH       +  RRM+  LAAP+
Sbjct: 12  PGQGHINPARALAARLARATGAHVTLSVAVSAHRRMFPSLAAPD 55


>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
            21204453-21205031,21205176-21205484,21205638-21205718,
            21205971-21206279,21207430-21207816,21207964-21208767,
            21208856-21209218,21209437-21209667,21209934-21210278,
            21210494-21210712,21210759-21210815,21210978-21211322,
            21211538-21211756,21211803-21211859,21212022-21212366,
            21212584-21212814,21213100-21213458
          Length = 4322

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = +3

Query: 492  GGTMGRWWECPYLLSSETTAKGTGL-GESAGKEXPVELD 605
            GG+  RWW     L   T   G  + G S G + P  +D
Sbjct: 2265 GGSRSRWWHASKTLPDGTPISGDDVTGLSPGDQMPTRMD 2303


>02_01_0716 + 5348720-5349115
          Length = 131

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/74 (28%), Positives = 29/74 (39%)
 Frame = +3

Query: 174 WINEIPTVPIYSSMESRGLRWAQFTTRTWSGTRKIFGSCASSRIHGTRRALRANHEDCLA 353
           W + +PT P  S   S G  +A  T+R  +      G CA     G   A     +    
Sbjct: 52  WTSMVPTPPPLSGAASSGPTYAPSTSRRKASVVMFRGGCAK----GGSVATAMGEDGARE 107

Query: 354 TKNVGDVSSPRTGR 395
           T+  G+    RTGR
Sbjct: 108 TEASGEKRWGRTGR 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,822,847
Number of Sequences: 37544
Number of extensions: 430314
Number of successful extensions: 1160
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1160
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)