Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_H11
         (900 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63810-1|AAC24948.1|  339|Homo sapiens WD40 protein Ciao 1 protein.    30   10.0 
EF011618-1|ABK41108.1|  339|Homo sapiens CDW8/WDR39 protein.           30   10.0 
D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein.               30   10.0 
CR456802-1|CAG33083.1|  339|Homo sapiens CIAO1 protein.                30   10.0 
BC032812-1|AAH32812.1|  339|Homo sapiens cytosolic iron-sulfur p...    30   10.0 
BC001395-1|AAH01395.1|  339|Homo sapiens cytosolic iron-sulfur p...    30   10.0 
AK223257-1|BAD96977.1|  339|Homo sapiens WD40 protein Ciao1 vari...    30   10.0 
AC004020-1|AAC23493.1|  339|Homo sapiens Unknown gene product pr...    30   10.0 

>U63810-1|AAC24948.1|  339|Homo sapiens WD40 protein Ciao 1 protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>EF011618-1|ABK41108.1|  339|Homo sapiens CDW8/WDR39 protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>D80004-1|BAA11499.1| 1157|Homo sapiens KIAA0182 protein.
          Length = 1157

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/64 (29%), Positives = 30/64 (46%)
 Frame = -3

Query: 658 RSPTYXTPXMSPYNARXESSSTGSSFPADSPKPVPLAVVSLDSR*GHSHHLPMVPPTLRL 479
           R P      +S  ++   S +T  S PA +PK VP+  + +    GHS  +P  PP + +
Sbjct: 10  RGPGMKGSSLSSESSPVSSPATNHSSPASTPKRVPMGPIIVPPG-GHS--VPSTPPVVTI 66

Query: 478 LGPK 467
              K
Sbjct: 67  APTK 70


>CR456802-1|CAG33083.1|  339|Homo sapiens CIAO1 protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>BC032812-1|AAH32812.1|  339|Homo sapiens cytosolic iron-sulfur
           protein assembly 1 homolog (S. cerevisiae) protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>BC001395-1|AAH01395.1|  339|Homo sapiens cytosolic iron-sulfur
           protein assembly 1 homolog (S. cerevisiae) protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>AK223257-1|BAD96977.1|  339|Homo sapiens WD40 protein Ciao1 variant
           protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


>AC004020-1|AAC23493.1|  339|Homo sapiens Unknown gene product
           protein.
          Length = 339

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 390 GRMLVE*RGRC*FV--EPIGTLVP*SSCFGPNNRKVGGTMGRWWECPYLLS 536
           GR+      RC F+   P GTL+  +SC G    ++ GT G  W C  +LS
Sbjct: 9   GRVPAHPDSRCWFLAWNPAGTLL--ASCGGDRRIRIWGTEGDSWICKSVLS 57


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,234,235
Number of Sequences: 237096
Number of extensions: 2252568
Number of successful extensions: 8399
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8398
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)