Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_H09
         (851 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    59   2e-08
BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    52   4e-06

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 59.3 bits (137), Expect = 2e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 96  MVNYAWSGRSQGKP*WRTVAILTCKSIVGTGYRG 197
           MVNYAW+GRSQ K  WR+VA+LTCKS+V  GYRG
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34


>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 51.6 bits (118), Expect = 4e-06
 Identities = 24/30 (80%), Positives = 25/30 (83%)
 Frame = -3

Query: 765 MIGRADIEGSKSNVAMNAWLPQASIPVVTF 676
           MIGRADIEGSKS+VAMNAW PQAS P   F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,742,693
Number of Sequences: 237096
Number of extensions: 2980166
Number of successful extensions: 9697
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9694
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)