Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G21
(856 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 406 e-113
SB_56| Best HMM Match : Actin (HMM E-Value=0) 406 e-113
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 405 e-113
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 403 e-112
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 301 3e-82
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 235 3e-62
SB_54| Best HMM Match : Actin (HMM E-Value=0) 225 3e-59
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 222 3e-58
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 203 2e-52
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 170 1e-42
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 106 3e-23
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 89 3e-18
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 69 5e-12
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 44 2e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.13
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 32 0.52
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.90
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 31 0.90
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.90
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 31 1.6
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.6
SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027) 31 1.6
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.1
SB_41539| Best HMM Match : PUD (HMM E-Value=0.42) 30 2.8
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 30 2.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.8
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 29 3.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 4.8
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 6.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 29 6.4
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 6.4
SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064) 29 6.4
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 6.4
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 8.4
SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23) 28 8.4
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 28 8.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_10665| Best HMM Match : PT (HMM E-Value=6.2) 28 8.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 28 8.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 8.4
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 406 bits (1000), Expect = e-113
Identities = 193/210 (91%), Positives = 197/210 (93%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 386 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 565
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 566 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLC 745
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK KLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 746 YVALDFXQEMATXASXXSLEKXYXLPXGXV 835
YVALDF QEM T AS SLEK Y LP G V
Sbjct: 219 YVALDFEQEMTTAASSSSLEKSYELPDGQV 248
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 91 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 406 bits (999), Expect = e-113
Identities = 193/210 (91%), Positives = 197/210 (93%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 386 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 565
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 566 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLC 745
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK KLC
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217
Query: 746 YVALDFXQEMATXASXXSLEKXYXLPXGXV 835
YVALDF QEM T AS SLEK Y LP G V
Sbjct: 218 YVALDFEQEMQTAASSSSLEKSYELPDGQV 247
Score = 88.2 bits (209), Expect = 7e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 97 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 405 bits (997), Expect = e-113
Identities = 192/210 (91%), Positives = 197/210 (93%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 386 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 565
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 566 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLC 745
GV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK KLC
Sbjct: 159 GVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 746 YVALDFXQEMATXASXXSLEKXYXLPXGXV 835
YVALDF QEM T AS SLEK Y LP G V
Sbjct: 219 YVALDFEQEMETAASSSSLEKSYELPDGQV 248
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1
Query: 91 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 403 bits (992), Expect = e-112
Identities = 192/210 (91%), Positives = 197/210 (93%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 97
Query: 386 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 565
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 566 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLC 745
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK KL
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLA 217
Query: 746 YVALDFXQEMATXASXXSLEKXYXLPXGXV 835
YVALDF QEMAT A+ SLEK Y LP G V
Sbjct: 218 YVALDFEQEMATAAASSSLEKSYELPDGQV 247
Score = 87.0 bits (206), Expect = 2e-17
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 97 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 301 bits (740), Expect = 3e-82
Identities = 157/210 (74%), Positives = 163/210 (77%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 385
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 386 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 565
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDS-- 156
Query: 566 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLC 745
G + H + I ERGYSFTTTAEREIVRDIK KLC
Sbjct: 157 ----------GDGVSHTV---------------PIYEERGYSFTTTAEREIVRDIKEKLC 191
Query: 746 YVALDFXQEMATXASXXSLEKXYXLPXGXV 835
YVALDF QEM T AS S+EK Y LP G V
Sbjct: 192 YVALDFEQEMQTAASSSSIEKSYELPDGQV 221
Score = 89.8 bits (213), Expect = 2e-18
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +1
Query: 91 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 235 bits (575), Expect = 3e-62
Identities = 114/133 (85%), Positives = 120/133 (90%)
Frame = +2
Query: 437 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 616
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 617 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLCYVALDFXQEMATXASXX 796
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK KLCYVALDF QEM T AS
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 797 SLEKXYXLPXGXV 835
SLEK Y LP G V
Sbjct: 198 SLEKSYELPDGQV 210
Score = 100 bits (240), Expect = 1e-21
Identities = 46/53 (86%), Positives = 47/53 (88%)
Frame = +2
Query: 206 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 364
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 88.2 bits (209), Expect = 7e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 97 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 219
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 225 bits (551), Expect = 3e-59
Identities = 101/162 (62%), Positives = 127/162 (78%)
Frame = +2
Query: 344 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 523
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 524 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 703
ASGRTTG V D GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +T
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQST 2248
Query: 704 AEREIVRDIKXKLCYVALDFXQEMATXASXXSLEKXYXLPXG 829
AE++I+RD+K LCY A+D+ +E+ + E Y LP G
Sbjct: 2249 AEQQIIRDLKETLCYCAMDYERELKEAETSDDCEAPYMLPDG 2290
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 115 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 216
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 222 bits (542), Expect = 3e-58
Identities = 103/199 (51%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Frame = +2
Query: 242 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEA 418
KD VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE
Sbjct: 53 KDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEP 112
Query: 419 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 598
PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGDGV+H P+YEG
Sbjct: 113 PLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICPVYEG 172
Query: 599 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLCYVALDFXQEMA 778
+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +K KLCYV + QE
Sbjct: 173 FALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQK 232
Query: 779 TXASXXSLEKXYXLPXGXV 835
L + Y LP G V
Sbjct: 233 LALETTVLVEQYTLPDGRV 251
Score = 44.4 bits (100), Expect = 1e-04
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 109 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 207
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 203 bits (495), Expect = 2e-52
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +2
Query: 458 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 637
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRLDLA
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 638 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKXKLCYVALDFXQEM 775
GRDLTDYLMK++TERGYSFTTTAEREIVRDIK KLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 170 bits (413), Expect = 1e-42
Identities = 73/114 (64%), Positives = 99/114 (86%)
Frame = +2
Query: 392 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 571
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 572 SHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 733
SH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IK
Sbjct: 186 SHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIK 239
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 106 bits (254), Expect = 3e-23
Identities = 47/126 (37%), Positives = 80/126 (63%)
Frame = +2
Query: 302 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 481
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 482 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 661
PA ++ +VL+ +A+GR+ G+V+DSG + VP+++GY L AI+R LAG +T
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQC 122
Query: 662 MKILTE 679
++ E
Sbjct: 123 RQMFEE 128
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 89.4 bits (212), Expect = 3e-18
Identities = 45/110 (40%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Frame = +2
Query: 503 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL-TE 679
Q LSLYASG T G+ L SG + IYEG+ L H + L++ G LT+ L + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 680 RGYSFTTTAEREIVRDIKXKLCYVALDFXQEMATXASXXSLEKXYXLPXG 829
RG++FT+++ +IV DIK K+CY++ D +E+ + L K Y LP G
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDG 876
Score = 47.6 bits (108), Expect = 1e-05
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 85 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 210
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 68.9 bits (161), Expect = 5e-12
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +2
Query: 470 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 646
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +AGRD
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 647 LTDYLMKILTERGYSFTTTAEREIVRDIKXKLCYVALDFXQEMA 778
+T ++ ++L ER E + IK + Y+ D +E A
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 100 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 216
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 230 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 409
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 32.3 bits (70), Expect = 0.52
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +2
Query: 539 TGIVLDSGDGVSHTVPI 589
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 44.0 bits (99), Expect = 2e-04
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 8/133 (6%)
Frame = +2
Query: 251 YVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 424
++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 273 FIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE----------------- 315
Query: 425 NPKANREKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVP 586
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP
Sbjct: 316 ---GLEDAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVP 372
Query: 587 IYEGYALPHAILR 625
++ G + A+ R
Sbjct: 373 VFNGKVIKKAVRR 385
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 103 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGR 222
++A LV+D G+ K GFA + APR++ P+ + + + + R
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSERR 270
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = -2
Query: 213 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFLV 97
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + +V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +2
Query: 347 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 526
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 527 SGRTTGIV 550
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 34.7 bits (76), Expect = 0.097
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 483 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 462 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTRDTHSPTPSC 623
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 34.3 bits (75), Expect = 0.13
Identities = 36/95 (37%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Frame = +3
Query: 360 PSTMSCVSPPR--NTPS--C--SXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRC 521
PST S S PR +TPS C S C+ HST ++PS P + C
Sbjct: 21 PSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTPCT-HSTPSAPSTPSTPSTPC 79
Query: 522 TRPVVP--PVSCWTPATVSPTPCPSTRDTHSPTPS 620
T P P P + TP+T S PST T S TPS
Sbjct: 80 T-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +3
Query: 468 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSP--TPS 620
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 29.5 bits (63), Expect = 3.6
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Frame = +3
Query: 360 PSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCT--RPV 533
PST S S P +TPS S ST ++PS P + T P
Sbjct: 114 PSTPSTPSTP-STPSAPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPSTPITPGTPSTPS 172
Query: 534 VP--PVSCWTPATVSPTPCPSTRDTHSPTPS 620
P P + TP+T+S PST T S TPS
Sbjct: 173 TPSAPGTPITPSTLSTPSTPSTPSTRS-TPS 202
Score = 29.5 bits (63), Expect = 3.6
Identities = 30/88 (34%), Positives = 37/88 (42%)
Frame = +3
Query: 357 IPSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 536
+P+T S S P +TPS S ST ++PS P + CT P
Sbjct: 221 MPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PNT 278
Query: 537 PPVSCWTPATVSPTPCPSTRDTHSPTPS 620
P TP+T S PST T S TPS
Sbjct: 279 PS----TPSTPSMPSTPSTPSTPS-TPS 301
Score = 29.5 bits (63), Expect = 3.6
Identities = 30/88 (34%), Positives = 37/88 (42%)
Frame = +3
Query: 357 IPSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 536
+P+T S S P +TPS S ST ++PS P + CT P
Sbjct: 771 MPNTPSTPSTP-STPSTLSTPITPSTPSTPSTPSTPSMPSTPSTPSTPSTPSTPCT-PNT 828
Query: 537 PPVSCWTPATVSPTPCPSTRDTHSPTPS 620
P TP+T S PST T S TPS
Sbjct: 829 PS----TPSTPSMPSTPSTPSTPS-TPS 851
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 492 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTRDTHSPTP 617
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 34.3 bits (75), Expect = 0.13
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +2
Query: 98 TRKLPRW**TMAPVCARPVSQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDS---YVGDEA 268
TRK P++ PV R ++ + L +P+++ + G+ DS VG++
Sbjct: 62 TRKNPQFEPGFEPVPQRWITVQGWLGNRQNPKTYVQELSGKIGGRKGEPDSGGLAVGNDI 121
Query: 269 QSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKAN 439
S I L+ P + +VT+++ E++ H F + P HPV++TE NP
Sbjct: 122 GSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYC 181
Query: 440 RE 445
R+
Sbjct: 182 RQ 183
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 471 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 584
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 486 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 584
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 33.1 bits (72), Expect = 0.30
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +3
Query: 483 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTRDTHSPTPS 620
P TSP + P +R P+ PP C + V PTP S++ + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.3 bits (70), Expect = 0.52
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 486 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTRDTHSP 611
P T PC + CT+ +P +TP T TPC PST +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +3
Query: 462 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 584
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +3
Query: 486 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 584
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 32.3 bits (70), Expect = 0.52
Identities = 28/77 (36%), Positives = 33/77 (42%)
Frame = +1
Query: 493 RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHEDP 672
RR S A R RS R R+ RRR R R+P H S SRSR R P
Sbjct: 211 RRSHSPAHHRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSR-SRSPRRRH 269
Query: 673 HRARXLVHYHRRAGNRS 723
R+R H R+ + S
Sbjct: 270 SRSRSPTHRRHRSRSHS 286
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 32.3 bits (70), Expect = 0.52
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 492 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
T+P+ P + T P P + TP T + TP +P P+
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPA 172
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 31.5 bits (68), Expect = 0.90
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +3
Query: 483 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
P SP+ P P P + TP T +PT T+ T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Frame = +3
Query: 360 PSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 539
P+T S +P + TP+ + T +P+KP P P
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTP 115
Query: 540 PVSCWTPATVSP-TPCPS--TRDTHSPT 614
+ TP +P TP P+ T H+PT
Sbjct: 116 TPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 477 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +3
Query: 483 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTRDTHSPTPS 620
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 477 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC---PSTRDTHSPTPS 620
T+P T+P+ T P S P +PTP P+T +PTP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPT 87
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +3
Query: 474 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTRDTHSPTPS 620
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 483 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 578
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 188 GNTARGASSPAKPALHIPEPLSTT 117
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.90
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 434 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 550
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 31.5 bits (68), Expect = 0.90
Identities = 22/91 (24%), Positives = 34/91 (37%), Gaps = 4/91 (4%)
Frame = +3
Query: 360 PSTMSCVSPPRNTPSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCT-SPSKPCSR---CTR 527
P+T + P TP + +T PP T +P+KP + T
Sbjct: 98 PATTTPTKPTTTTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATT 157
Query: 528 PVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
P + PAT +PT +T + TP+
Sbjct: 158 TPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +3
Query: 471 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 474 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.5 bits (68), Expect = 0.90
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -2
Query: 639 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 460
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 459 IWVIFSLLALGLR 421
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 639 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 502
P + S +P T W +PSP+ T P ++T+W
Sbjct: 57 PLSQYKTTFMSSTFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
Score = 28.3 bits (60), Expect = 8.4
Identities = 12/46 (26%), Positives = 19/46 (41%)
Frame = -2
Query: 639 PAKSRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 502
P+ + +W S P T W P P+ T P ++T+W
Sbjct: 81 PSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.90
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3
Query: 188 GNTARGASSPAKPALHIPEPLSTT 117
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 480 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHS 608
+PP T+PSK T P+ P++ TP T T +T+ T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 471 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTRDTHSPTP 617
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
>SB_43551| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.027)
Length = 466
Score = 30.7 bits (66), Expect = 1.6
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 9/115 (7%)
Frame = -2
Query: 579 VWE--TPSPESSTIPVVRPD-------AYSESTAWMATYMAGVLNVSNMIWVIFSLLALG 427
VWE T P + T+P + D Y S +W+ VL N ++++F +LG
Sbjct: 3 VWELSTTGPTNRTVPTIIIDYAICTEVLYKTSGSWIRICDI-VLLAPNAMFMVFLFYSLG 61
Query: 426 LRGASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCAS 262
L A + T C T +L + ++++SQ+ + C + R +LL AS
Sbjct: 62 LAHAKLVGTRCPIVKTIYTLLLLYGIHYTLNSQVFAV-CVVSVARCFASMLLTAS 115
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/83 (27%), Positives = 29/83 (34%)
Frame = +1
Query: 415 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 594
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 595 GIRTPPRHPASGLSRSRPHRLPH 663
T P HP R+ P PH
Sbjct: 376 SKSTAPDHPHGVSKRTAPDH-PH 397
Score = 29.9 bits (64), Expect = 2.8
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +1
Query: 427 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRT 606
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 607 PPRHPASGLSR 639
P HP GLS+
Sbjct: 248 APDHP-HGLSK 257
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -3
Query: 188 GNTARGASSPAKPALHIPEPLSTT 117
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 418 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 510
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +3
Query: 498 PSKPCSRCTRPVVPP 542
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_41539| Best HMM Match : PUD (HMM E-Value=0.42)
Length = 1582
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +1
Query: 529 RSYHRYRAGLRRRCLPHRAHLRGIRTPPRHPASGLSRSRPHRLPHE 666
R R R G R+ P + G TPP+ PA+ RL HE
Sbjct: 942 RRLRRSRKGTRKGDTPRKEGEAGAATPPQSPAAAPQSPPVQRLVHE 987
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 155 SQEMMLLAPCSPRSWEGPAIRAVMVGMGQKDSYVGDEAQ 271
S E + APCSPRS P I M G G + S+V +E +
Sbjct: 803 SLESSIEAPCSPRSASKPVISGEMNG-GPRASHVIEETE 840
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +3
Query: 486 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 584
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 486 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 590
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 483 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTRDTHSPTP 617
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 29.5 bits (63), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 492 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTR 596
+SP KP T+PVVP P+ + P P PS++
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 397 PRPAH*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 543
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 519 CTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
C+RP PPV+ T +T S T +T T + TP+
Sbjct: 620 CSRPTTPPVTT-TKSTTSSTTKGTTASTTTSTPT 652
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 457 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIR 603
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +2
Query: 422 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 550
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +3
Query: 492 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCVW 629
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.7 bits (61), Expect = 6.4
Identities = 21/75 (28%), Positives = 36/75 (48%)
Frame = +1
Query: 421 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGI 600
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 601 RTPPRHPASGLSRSR 645
+T + P+ +R++
Sbjct: 707 QTHSQ-PSQATARTQ 720
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 498 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTRDTHSPTPSCVWT*PV 641
PS P S PV V T T +PT C T + P+C+ PV
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPV 134
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 6.4
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +3
Query: 468 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTRDTHSPTP 617
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_36012| Best HMM Match : DUF755 (HMM E-Value=0.064)
Length = 265
Score = 28.7 bits (61), Expect = 6.4
Identities = 23/89 (25%), Positives = 32/89 (35%), Gaps = 3/89 (3%)
Frame = +1
Query: 415 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 594
G P ED D + ++ R S + R+++ + R R H R
Sbjct: 82 GGPSRHNNASEDSFDSGEEEKRNKNSARKMSPINGHKSSRKSRHKSDKKERASRKRRHSR 141
Query: 595 GIRTPPRHPASGLS--RSRPHRL-PHEDP 672
P RHP+ S R R RL H P
Sbjct: 142 SESPPVRHPSGSQSGDRQRERRLHKHSSP 170
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 495 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 617
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 573 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 400
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 399 G 397
G
Sbjct: 147 G 147
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 451 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTPPRH 618
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_32327| Best HMM Match : ig (HMM E-Value=7.9e-23)
Length = 932
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 10/57 (17%)
Frame = +3
Query: 492 TSPSKPCSRCTRPVVPPVSCWTPATVS---------PTPCPSTRDTHSPTPSC-VWT 632
T S+PC +CT V P + T A S PTP S R+ H +P WT
Sbjct: 38 TGLSRPCQKCTVFVSTPDNSVTGAVASSVPSFGVELPTPRTSARNPHQRSPPLQAWT 94
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 480 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHSPTP 617
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3
Query: 188 GNTARGASSPAKPALHIPEPLSTT 117
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -3
Query: 188 GNTARGASSPAKPALHIPEPLSTT 117
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_10665| Best HMM Match : PT (HMM E-Value=6.2)
Length = 215
Score = 28.3 bits (60), Expect = 8.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +1
Query: 574 PHRAHLRGIRTPPR-HPASGLSRSRPHRLPHEDPH 675
PHR H+ RTP R H + PH P +PH
Sbjct: 161 PHRPHMDPTRTPHRPHMDPTRTSHGPHTDPTRNPH 195
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 522 TRPVVPPVSCWTPATVSPTPCPSTRDTHSPTPSCV 626
T VVPP+ P V P+P + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPLTQP-EVESPTPSCI 236
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 468 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTRDTHSPTPS 620
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 28.3 bits (60), Expect = 8.4
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +1
Query: 472 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRGIRTP----PRHPASGLSR 639
I H++ RH S+ L R R HR + RR H+ + P P ++ +
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRPRNWVPPFNSTAMIF 1647
Query: 640 SRPH 651
+PH
Sbjct: 1648 GKPH 1651
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,007,783
Number of Sequences: 59808
Number of extensions: 707122
Number of successful extensions: 2838
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 2271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2781
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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