Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP01_FL5_G20
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    25   0.77 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   4.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   7.1  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   7.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   7.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   9.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   9.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   9.4  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 25.0 bits (52), Expect = 0.77
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +2

Query: 569  TAATTMGQWFRKWRIDINPTKSTAVLFKRGRPPNTTL---SIPLPTXRVNNPPP 721
            TAATT+G+     ++ ++P+ S            TT     + LP   V  PPP
Sbjct: 1283 TAATTIGEGQPSKKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVGLPPP 1336


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 622 VNVDAPLPEPLSHGGSC 572
           +NVD   P P  +GG+C
Sbjct: 221 LNVDDCKPNPCQNGGTC 237


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 3   LEILNYCLISFKLRNCTASASVA 71
           L +LN CL S    NCTA   VA
Sbjct: 215 LAMLN-CLCSLWFINCTAKGRVA 236


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 3   LEILNYCLISFKLRNCTASASVA 71
           L +LN CL S    NCTA   VA
Sbjct: 215 LAMLN-CLCSLWFINCTAKGRVA 236


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = +2

Query: 623 PTKSTAVLFKRGRPPNTTLSIPLPTXRVNNPPPPFXQSRCTXSPYRGPRR 772
           PT ST   +   + P T +S  +    + + PPP  Q     +P + P +
Sbjct: 302 PTYST---WSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQ 348


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 157 VRPSSAPPHGAHLTRAEQA 213
           V+PS+ PP  + L+ A+ A
Sbjct: 3   VQPSNTPPEKSQLSTADTA 21


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 157 VRPSSAPPHGAHLTRAEQA 213
           V+PS+ PP  + L+ A+ A
Sbjct: 3   VQPSNTPPEKSQLSTADTA 21


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 157 VRPSSAPPHGAHLTRAEQA 213
           V+PS+ PP  + L+ A+ A
Sbjct: 3   VQPSNTPPEKSQLSTADTA 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,016
Number of Sequences: 336
Number of extensions: 4971
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)