Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP01_FL5_G11
(923 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 66 5e-11
SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 64 2e-10
SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41) 62 6e-10
SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 59 6e-09
SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 54 1e-07
SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24) 54 2e-07
SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10) 51 1e-06
SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 51 2e-06
SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07) 51 2e-06
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 2e-06
SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35) 50 3e-06
SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06
SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 49 5e-06
SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 48 1e-05
SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24) 44 2e-04
SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22) 44 2e-04
SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24) 43 3e-04
SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06) 42 5e-04
SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022) 42 0.001
SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3) 41 0.002
SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08) 39 0.007
SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 38 0.009
SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002) 37 0.020
SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 0.023
SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07) 37 0.026
SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08) 35 0.11
SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11) 33 0.25
SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05) 33 0.33
SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.43
SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.00
SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36) 31 1.00
SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2) 31 1.3
SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07) 31 1.7
SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92) 31 1.7
SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05) 30 2.3
SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8) 30 2.3
SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32) 30 3.0
SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15) 29 4.0
SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08) 29 4.0
SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_50413| Best HMM Match : GRP (HMM E-Value=0.15) 29 4.0
SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0) 29 5.3
SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10) 29 5.3
SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26) 29 5.3
SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24) 29 7.0
SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.0
SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
>SB_31671| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 541
Score = 65.7 bits (153), Expect = 5e-11
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 12/156 (7%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
++ LL Y +D+ P + + + L + LR ++ E + + I ++ W D L
Sbjct: 35 LLKYLLQNYSKDARPVLNVNDPVQLKLGIMLRQVIDLNERDQILTINVWIRQYWKDHLLK 94
Query: 306 WNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNN------GSVSWIKR 464
WN ++G + ++ +R+W+PDV+L N A+T +L ++ N GS +W+
Sbjct: 95 WNPDDFGGIKSINIAPDRVWKPDVLLYNRASTDLRFGSLNNKIDTNVIVNHDGSTTWLAP 154
Query: 465 LDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
I + + + +P D+Q+C FGS H+ +D
Sbjct: 155 AIIKSECKIDVRFFPFDVQSCELTFGSWTHDGLKID 190
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLS 305
+++ L Y +D+ P D + + L + LR ++ E E + ++ W D L
Sbjct: 453 LLNYLFQNYSKDARPVLNVDDPVQLKLGIMLRQVIDLDEREQILTTNVWIRQYWADHFLQ 512
Query: 306 WNAGEW-GCSTWLVSSERLWRPDVVLLN 386
WN ++ G + +++ +++W+PDV+L N
Sbjct: 513 WNPDDFSGIKSIIIAPDKVWKPDVLLFN 540
>SB_49329| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 716
Score = 64.1 bits (149), Expect = 2e-10
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 5/116 (4%)
Frame = +3
Query: 240 ESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGD-- 410
E +++ ++ W + LSWNA E+G S + ++LW+PD+ L N A ++A
Sbjct: 104 EKYELLKLSLYVRQIWKNPLLSWNASEYGGISQVNLEPDQLWKPDIYLYNNADSSADGSL 163
Query: 411 YALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
Y +A+ VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 164 YGFKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 219
>SB_52663| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.50006e-41)
Length = 342
Score = 62.1 bits (144), Expect = 6e-10
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Frame = +3
Query: 207 LTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL 383
LTL+ H ++E ++ L+ W D RL+WN E+G + S+ +W PD+ +L
Sbjct: 22 LTLYDFHTQDEKNE-VIQTFLILEQMWNDTRLAWNETEYGGIKQMTLRSKLIWTPDISVL 80
Query: 384 NAAATTAG--DYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHN 557
N+A + +R +++ G V W+ L + T M + ++P D Q C +FGS +
Sbjct: 81 NSANKDMDLREKNIRLFINSAGEVLWMNPLILHTSCGMDIAHFPFDNQACELRFGSWSTS 140
Query: 558 SDXMD 572
MD
Sbjct: 141 LRYMD 145
>SB_31676| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 422
Score = 58.8 bits (136), Expect = 6e-09
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYALRARV------ 431
+++ W D L+WN ++G + V +W+PD++L N A+T +L ++
Sbjct: 26 IRLYWKDHLLNWNPEDFGGVKSINVEPNNVWKPDILLYNPASTDLRVESLYKKIDTKVIL 85
Query: 432 SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVIDK 587
S++GS +W+ I T + + +P D+Q C KFGS H+ +D + K
Sbjct: 86 SSDGSAAWLSPAIIKTECKVDVRLFPFDVQYCDLKFGSWTHDGLKIDIQLRK 137
>SB_17986| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 724
Score = 58.0 bits (134), Expect = 1e-08
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Frame = +3
Query: 252 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLNAAATTAGDYALR- 422
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN A ++ +
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLNNAEKSSMGKPVNE 91
Query: 423 ---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
V +NG V W+ + + + M + ++P D Q C KF S
Sbjct: 92 GNPVLVESNGVVRWLAPVVLKSRCKMDVRSYPFDEQYCGLKFAS 135
>SB_59159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Frame = +3
Query: 225 HANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA-AT 398
H + + TV L W D L+WN ++G + V +W PD+VL N +
Sbjct: 199 HQQLMGAPVTVACFLPLLQKWYDPWLTWNESDFGGMKSIKVDPSCVWVPDIVLYNNVDSD 258
Query: 399 TAGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
++G+ + + + ++G+V W+ + + + + + N+P D Q C +FGS
Sbjct: 259 SSGEMYKFTTKVNIHSDGTVQWLSPIQVKSECKIDITNFPLDEQFCKLEFGS 310
>SB_37593| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 548
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +3
Query: 216 HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
HLR + V + ++ W + L+WN ++G + ++ ++W PD++L N A
Sbjct: 106 HLRFDISEQQAQLVTVSVWIRQKWTNPMLAWNTSKYGGIESVNLNPAKVWIPDIILYNNA 165
Query: 393 ATT-AGD---YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
T AG Y S++G+ W ++ ++ + +P D Q C+ KFGS
Sbjct: 166 DETYAGGLEKYKTSVIASSDGTQEWNSPASFTSTCNINVRYFPFDSQNCSLKFGS 220
>SB_38489| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.1e-24)
Length = 445
Score = 53.6 bits (123), Expect = 2e-07
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA--ATTAGD----------Y 413
+ + W + LSWNA E+ G S VS +R W PD++L N+ +A + Y
Sbjct: 21 IAVRWTNPDLSWNASEYGGVSQIYVSPKRPWTPDILLYNSVRFVDSAEEDDRLGGGTEKY 80
Query: 414 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 584
+ + +NG SW+ + + +P D Q CT +FGS ++ +D ID
Sbjct: 81 KTQIEIRSNGYNSWLSPAMFKSTCDVNTRYFPFDDQHCTLEFGSWAFDASQLDLQID 137
>SB_7484| Best HMM Match : Neur_chan_memb (HMM E-Value=1.3e-10)
Length = 384
Score = 51.2 bits (117), Expect = 1e-06
Identities = 28/115 (24%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSER-LWRPDVVLL-NAAATTAG--DYA-LRARVSNNGSV 449
W+++ +W+ E+G +V R +W+PD++L N G D+ R R++++G
Sbjct: 2 WLNQLTTWDPEEYGGVKEVVLQARDVWQPDIILYQNIIQDFDGRLDHTNTRVRITSSGMT 61
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVIDKRIYXMFRVR 614
W + T ++ + ++P D Q C FGS H+ + ++ + D++ + + R
Sbjct: 62 YWSMPFVVVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTR 116
>SB_59781| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 275
Score = 50.8 bits (116), Expect = 2e-06
Identities = 25/105 (23%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAT----TAGDYALRARVSN 437
+ + W + ++WN E+G + + LW+PD+ L N A + + + + +V+
Sbjct: 44 MDVKWENPLVAWNKSEYGGIVQVNLDPSTLWKPDIYLYNNADSGYDGSLYGFTAKIKVNY 103
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
+G+ +W+ +T + + +P D Q C KFGS ++++ +D
Sbjct: 104 SGTNTWLAPKIFTTSCKINVKYFPFDQQECRLKFGSWTYDANSVD 148
>SB_27375| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.3e-07)
Length = 240
Score = 50.8 bits (116), Expect = 2e-06
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 7/105 (6%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATT---AGDYAL---RARVS 434
+ W + L W+ ++ + + +W PD+ LLN T AG ++ V
Sbjct: 123 ERTWRNPYLKWDKAKYQNRDRVHFDPKEIWVPDISLLNNGDNTVKMAGGRSIFLTNVVVE 182
Query: 435 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXM 569
N G W + + SM L WP D QTC KFGS + S+ M
Sbjct: 183 NTGKCVWSGPVTFTFTCSMALSRWPFDQQTCAMKFGSLSYGSNLM 227
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 50.8 bits (116), Expect = 2e-06
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN--AAATTAGDYAL--RARVSN 437
+ + W++ L+W+ +G T + V+ +W+PD+VL + T Y RA + +
Sbjct: 64 INLRWVNPFLTWDPKMYGGLTSINVNPNMIWKPDIVLYHNIGFGETGAIYKFDTRATIMH 123
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
NG W +I + ++ + +P D Q C KFGS
Sbjct: 124 NGYTEWFAPTEIHSICAIDITYFPFDEQFCKMKFGS 159
>SB_54107| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.4e-35)
Length = 479
Score = 50.0 bits (114), Expect = 3e-06
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAG---DYALRARVSNNGSV 449
W + L WN +G + VS ++W PD+VL N A A+T G ++ R VS++G
Sbjct: 40 WYNPFLRWNETFYGGIKEINVSPLQVWTPDLVLYNNADASTDGSLENFKTRIIVSSDGKN 99
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
W+ + S+ ++++ +P D Q C+ KFGS
Sbjct: 100 MWLAPVIFSSSCTIKIKYFPFDDQYCSLKFGS 131
>SB_73| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 930
Score = 49.2 bits (112), Expect = 5e-06
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 5/118 (4%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAA----T 398
+ E L+M W D L WN ++G T + + + +W P V++ N A +
Sbjct: 534 VEEKNMVFTTNVRLRMGWKDAFLQWNPADYGGVTQINLEASDIWTPPVIIYNQAGDLGES 593
Query: 399 TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
R V ++G+V W+ I + + + +P D Q C FGS ++ +D
Sbjct: 594 ITSSNTPRPVVRSDGTVLWMVPTVIKSSCVIDVKYFPFDQQLCKIIFGSWHYDVSKLD 651
>SB_44970| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 506
Score = 49.2 bits (112), Expect = 5e-06
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATTAGD----YALRARVSN 437
+ + W ++ L+W+ + G T + ++ +W PD+VL ++A + Y +S
Sbjct: 45 VNVRWDNELLTWHPSNYEGVQTVRLDAKSVWIPDIVLYDSADSVFSGGHEKYKTHVIISK 104
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
+GS +W + + + +P D QTC KFGS
Sbjct: 105 DGSSAWFSPASFRSTCKIDVTYFPFDEQTCYMKFGS 140
>SB_50983| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 434
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +3
Query: 276 QMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA--ATTAGDYALRARVS--NN 440
+ W D L W+ + G T + V LW+PD+VL N Y +V +
Sbjct: 88 RQTWTDAWLKWDPAKHGGITAINVDPSFLWKPDMVLYNNVNDEDRGEQYLFNTKVIIYST 147
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
G + W + T + + +P D QTC FGS +N +D
Sbjct: 148 GDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 191
>SB_46592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 648
Score = 47.6 bits (108), Expect = 1e-05
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAA---ATTAGDYAL---RARVSNNGS 446
W D L W+ ++ S + +W PDV L+N AG L V +G
Sbjct: 404 WKDPSLQWDKAKYNLHKTRFSPKEIWVPDVSLINNGDKLVHVAGGAELFNADTVVRQSGK 463
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 584
V WI + ++ ++++ WP D Q CT F S + + +D
Sbjct: 464 VDWIAQASFTSTCNLRVRFWPMDDQFCTLTFSSWTYTESEIALKMD 509
>SB_37778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 47.2 bits (107), Expect = 2e-05
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +3
Query: 255 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD---YAL 419
V + + + W + L+W+ +G T + V R+WRPD++L N A T G +
Sbjct: 69 VSLHQIIDLKWNNPLLTWDPTHFGNLTSINVDPLRVWRPDLILYNNADRDTDGALDRFYT 128
Query: 420 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 578
+ ++ +GS W+ + + + +P D Q+C KFGS ++ ++ V
Sbjct: 129 KVQLKFDGSSLWLAPIIFKSTCKFDVAYFPFDEQSCILKFGSWTYDGLRLNIV 181
>SB_38726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 46.0 bits (104), Expect = 4e-05
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Frame = +3
Query: 171 RDSPPDS---KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTW 338
R S PD ++VV+L + + +++ ++ I L+ W D L +N +++
Sbjct: 68 RPSTPDGGPLQVVVDLVI-ISMSSLDDNNMEYTISFYLRQTWHDPLLRYNKSSLVNAASY 126
Query: 339 LVSS----ERLWRPDVVLLNAAATTAG--DYAL---RARVSNNGSVSWIKRLDISTPISM 491
+ +++W+PD L N AG D +L RV NG+V++ R+ + M
Sbjct: 127 ATLNYALVDKIWKPDTYLENVKKIDAGSDDKSLVHKGFRVYPNGNVTFSTRISATLSCKM 186
Query: 492 QLDNWPNDMQTCTFKFGSRMHNSDXMDFVI-DKRIY 596
+ N+P D Q+C S D + ++ D RIY
Sbjct: 187 EFRNFPMDRQSCPVTISSYFFPEDEIYYIWGDLRIY 222
>SB_51056| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.3e-24)
Length = 373
Score = 44.0 bits (99), Expect = 2e-04
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Frame = +3
Query: 153 LLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAG 317
L TY++D P D + V L L L ++ + T+ + ++ W D RL WN
Sbjct: 20 LFRTYNKDVLPKETLDKGVPVRLDLALNQIIDVNKRAQTMTVVIWVRQYWRDPRLRWNVS 79
Query: 318 EW-GCSTWLVSSERLWRPDVVLLNAA 392
+ G ++ + RLW PD+ L N A
Sbjct: 80 AYDGVDNIVIKASRLWLPDITLYNNA 105
>SB_18568| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.5e-22)
Length = 636
Score = 43.6 bits (98), Expect = 2e-04
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSS--ERLWRPDV 374
V L + + H + +Q W DKRL AG+ S L S W+PD
Sbjct: 245 VQLYIQIIHVSPTLLPQEYPVQLYFHQYWTDKRL---AGKLNLSITLTGSAASNAWKPDP 301
Query: 375 VLLNAAATTA----GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 542
NA + D R + +G + + + + I M L ++P D Q C KFG
Sbjct: 302 YCYNARQSNMMLEDKDVNSRLSIDPDGKIFYSRGVSIVASCEMDLHDFPLDTQNCYLKFG 361
Query: 543 S 545
S
Sbjct: 362 S 362
>SB_38490| Best HMM Match : Neur_chan_LBD (HMM E-Value=2e-24)
Length = 478
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 279 MNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAA 392
+ W++ LSWNA E+G +T V +RLW PD+VL N A
Sbjct: 77 VKWVNPSLSWNASEFGGVNTLHVEPDRLWVPDIVLYNNA 115
>SB_30805| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.9e-06)
Length = 147
Score = 42.3 bits (95), Expect = 5e-04
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Frame = +3
Query: 285 WIDKRLSWNA-GEWGCSTWLVSSERLWRPDVVLLNAAATT---AGD---YALRARVSNNG 443
W D L W ++ + S + +W PDV L+N A + AG + V G
Sbjct: 2 WNDVFLKWRGEAKYQVTKTRFSPQEIWVPDVALINNADKSVRLAGGPELFKTDLNVWQGG 61
Query: 444 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVID 584
V W+ ++ +++ WP D Q CT F S + D + +I+
Sbjct: 62 KVEWVAPASFTSDCKLRVRYWPIDDQFCTLTFSSWTY--DDQEIIIE 106
>SB_53336| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.022)
Length = 91
Score = 41.5 bits (93), Expect = 0.001
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCT 530
+++W+PD + N ++T + + G V + +R+ + M L N+P D Q+C+
Sbjct: 26 KQIWKPDTYINNEKSSTVPENQFLLTIDPEGRVVYSQRMTVVASCMMYLRNYPMDTQSCS 85
Query: 531 FKFGS 545
F S
Sbjct: 86 ISFES 90
>SB_37177| Best HMM Match : Neur_chan_LBD (HMM E-Value=5.3)
Length = 79
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 252 TVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSER--LWRPDVVLLN 386
T+R+Q ++ W D +L W+ ++G +V ER +W PDVVLLN
Sbjct: 32 TIRLQQIYELAWWDHKLQWDQSKYGGIKEVVLPERGVIWVPDVVLLN 78
>SB_4545| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 39.9 bits (89), Expect = 0.003
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
Frame = +3
Query: 285 WIDKRLSWNAGEWGCSTWLVSSE--RLWRPDVVLLNA--AATTAGDYALRARVS--NNGS 446
W D+RL A S L E ++WRPD NA ++ TA D + + ++ NG
Sbjct: 12 WKDERL---ANRLNKSVVLKGDEITKMWRPDPFCYNARESSLTASDDDINSMMTIHPNGD 68
Query: 447 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNS 560
V + + I+ M+L ++P D Q C K GS +++
Sbjct: 69 VVYSRMTIITAECEMKLHDFPMDEQQCHLKLGSYSYST 106
>SB_453| Best HMM Match : Neur_chan_LBD (HMM E-Value=2.1e-08)
Length = 362
Score = 38.7 bits (86), Expect = 0.007
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNN 440
+ + W D RL WN ++G +++ S +LW PD+ L N A + V+++
Sbjct: 276 IDLYWTDFRLRWNHTKYGGIKSFVTPSRQLWLPDITLYNNANDNYEKEKEEYYGLTVNSD 335
Query: 441 GSVSWIKRLDISTPISMQLDNWPNDMQ 521
GS+ W + ++ + +P D Q
Sbjct: 336 GSIGWYYPTIFKSSCTIDVTYFPFDDQ 362
>SB_13360| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 480
Score = 38.3 bits (85), Expect = 0.009
Identities = 34/149 (22%), Positives = 60/149 (40%), Gaps = 4/149 (2%)
Frame = +3
Query: 141 MIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSW 308
++ +L YD+ S P + VN+++ ++ + I+ES + L+ W D RL+
Sbjct: 76 VLKRMLRKYDKYSRPYVGRRAVQVNISMAVQSFSQIKESNMEFEVFMYLRQEWNDPRLAH 135
Query: 309 NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPIS 488
S +W PD NA + + NG + + R +
Sbjct: 136 GYRAL-LSLAKDRVNDIWLPDTYFNNANEYEVYIVNQLSLIKPNGDIYYSGRNKVKGACQ 194
Query: 489 MQLDNWPNDMQTCTFKFGSRMHNSDXMDF 575
M L N+P D+Q C+ S + +DF
Sbjct: 195 MDLFNFPLDVQRCSLVLESFAYTGRQIDF 223
>SB_43224| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.002)
Length = 123
Score = 37.1 bits (82), Expect = 0.020
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIR---ESESTVRIQADLQM 281
++ L L+ D Y+++ P D + V + + + + E + + ++M
Sbjct: 27 QDDNELRLIKDLFFRGYNKNVRPVEDKSMPVEVKFGIAYTQVVDLIEKDQVLISNIWVRM 86
Query: 282 NWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
NW + L WNA E+G L +S +W PD+VL N
Sbjct: 87 NWNNHLLRWNASEYGGIDKLNISPTLMWLPDIVLHN 122
>SB_25727| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 28.3 bits (60), Expect(2) = 0.023
Identities = 11/44 (25%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 258 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 386
+++ + + W + L+W+ ++G + V+ E +W PD+V+ N
Sbjct: 1463 KLKQIVDLQWENPILTWDPRDYGGVQEINVAPEEVWVPDIVIYN 1506
Score = 27.5 bits (58), Expect(2) = 0.023
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 504 WPNDMQTCTFKFGSRMHNSDXMD 572
+P D Q C KFGS H+S +D
Sbjct: 1509 FPFDEQKCLLKFGSWTHDSSRLD 1531
>SB_30974| Best HMM Match : Neur_chan_LBD (HMM E-Value=4.9e-07)
Length = 134
Score = 36.7 bits (81), Expect = 0.026
Identities = 15/54 (27%), Positives = 30/54 (55%)
Frame = +3
Query: 411 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
+ + +VS+ G W+ ++T + + +P D Q+CT KFGS +++ +D
Sbjct: 13 FKAKIKVSHTGLNMWLAPTILTTSCKINVKYFPFDQQSCTLKFGSWTYDAGSVD 66
>SB_41593| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 319
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 21 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 59
>SB_32914| Best HMM Match : Neur_chan_memb (HMM E-Value=2.1e-08)
Length = 400
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 545
V+N G V W + S+++ WP D+Q C+ FGS
Sbjct: 102 VANTGKVVWQSPATFRSECSIKIRYWPFDVQKCSMTFGS 140
>SB_55106| Best HMM Match : Neur_chan_memb (HMM E-Value=4.5e-11)
Length = 269
Score = 33.5 bits (73), Expect = 0.25
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 420 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDF 575
+A V +NG W +I + + + +P D Q C KFGS + ++F
Sbjct: 21 KATVKHNGYTEWFAPTEIHSICKIDITFFPFDEQFCKLKFGSWTYTGRQLNF 72
>SB_37942| Best HMM Match : Neur_chan_LBD (HMM E-Value=7.7e-05)
Length = 191
Score = 33.1 bits (72), Expect = 0.33
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 192 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRP 368
K +V LH + A + S S VR+ +++ W + L WN ++ G T V+ +W P
Sbjct: 69 KRIVRPVLHPQDA-VNVSFS-VRLNKLVEVKWENPFLVWNESDYGGVHTLHVTFNDVWVP 126
Query: 369 DVVLLN 386
D+VL N
Sbjct: 127 DIVLYN 132
>SB_37285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 194
Score = 32.7 bits (71), Expect = 0.43
Identities = 17/65 (26%), Positives = 30/65 (46%)
Frame = +3
Query: 384 NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSD 563
N A T + + ++ N+G W I + ++ + +P D Q C KFGS +N
Sbjct: 5 NVPAGTLYQFKTKVQLFNDGLCVWYAPTIIQSGCNIDITYFPFDDQLCELKFGSWTYNGL 64
Query: 564 XMDFV 578
++ V
Sbjct: 65 EVNIV 69
>SB_42075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 127
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 357 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 524
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 17 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 76
Query: 525 CTFKFGS 545
C FGS
Sbjct: 77 CNLVFGS 83
>SB_46603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 346
Score = 32.3 bits (70), Expect = 0.57
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 357 LWRPDVVLLNAAATT--AGDYALRARVS--NNGSVSWIKRLDISTPISMQLDNWPNDMQT 524
LW PD NA + + D + + ++ +GS+ + + I M L ++P D QT
Sbjct: 144 LWFPDTYCSNAKRSDLMSPDTEIHSSLTLEPDGSIFYSRSAHIVASCEMDLRDFPMDTQT 203
Query: 525 CTFKFGS 545
C FGS
Sbjct: 204 CNLVFGS 210
>SB_41503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 31.5 bits (68), Expect = 1.00
Identities = 13/47 (27%), Positives = 26/47 (55%)
Frame = +3
Query: 438 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 578
NG W+ + +++ + + +P D Q C+ KFGS ++ + +D V
Sbjct: 22 NGINIWLAPVLLTSSCKIDVTYFPFDEQHCSLKFGSWTYDGERLDLV 68
>SB_17868| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.7e-36)
Length = 592
Score = 31.5 bits (68), Expect = 1.00
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 435 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
+NG+ W + + +++ +P D QTC KFGS H+ +D
Sbjct: 207 SNGTNKWRSPALLKSICKIKVKFFPFDSQTCKLKFGSFSHDITTLD 252
>SB_51192| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2)
Length = 75
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMD 572
+ + G + W + T + + +P D QTC FGS +N +D
Sbjct: 19 IYSTGDIEWYSPNILKTHCKIDIQYFPFDTQTCKLTFGSWTYNGLKID 66
>SB_27095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 534
Score = 31.1 bits (67), Expect = 1.3
Identities = 33/160 (20%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Frame = +3
Query: 117 ENATSLSLMIDSLLATYDRDSPP---DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMN 284
E A + + +D L ++ D+ P +VV + +++ + I + ++ +
Sbjct: 42 EYAKNTTKTLDRLKSSMDKRLRPFFGGKPVVVYVDIYIVNIGEISVTNMDYKLMLYYRQT 101
Query: 285 WIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATT-----AGDYALRARVSNNGSV 449
W D RL+++ E + +W PD + N ++T +Y L + NG+
Sbjct: 102 WHDPRLAFDLPE-AITVQGGMLNDIWIPDTLFTNEKSSTFHKVTQDNYLLS--IWPNGTT 158
Query: 450 SWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXM 569
R+ ++ M L +P D QTC S ++D +
Sbjct: 159 YLSMRISLTGICPMDLRKYPMDTQTCYLNIMSYSGSTDNL 198
>SB_6619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 942
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 468 PSALSRRRSRY*IHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNSVVCR 289
P + R +SR H R + R+ L+ + PR S+ T K SP+ R S R
Sbjct: 275 PPSEERPKSRLYRHSRSKSKERKTLKSPIRSPRGQSSRERNTKRKSKSPSLERRRSRARR 334
Query: 288 SNSFE 274
S S E
Sbjct: 335 SRSIE 339
>SB_19927| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.9e-07)
Length = 301
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 426 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFK 536
R+ NG++ + RL +++ M L N+P D Q C K
Sbjct: 64 RIFPNGTLLYSMRLKVTSQCPMDLRNFPMDSQKCRLK 100
>SB_4972| Best HMM Match : Neur_chan_LBD (HMM E-Value=0.92)
Length = 88
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVL 380
W + L+WN E+G T VS +W PD+VL
Sbjct: 53 WYNPLLTWNVTEYGGLKTINVSPTIIWLPDIVL 85
>SB_18327| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.2e-05)
Length = 109
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +3
Query: 435 NNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVIDKR 590
N G++ W + + + + +P D Q C+ FGS + S+ + I ++
Sbjct: 12 NTGAIEWYAPTLVKSICKIDITYFPFDKQNCSLVFGSWTYTSEFLSLDIKQK 63
>SB_14827| Best HMM Match : Neur_chan_LBD (HMM E-Value=3.8)
Length = 156
Score = 30.3 bits (65), Expect = 2.3
Identities = 13/35 (37%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 285 WIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 386
W ++ L+W+ E+G ST V+ +++W PD+ L N
Sbjct: 2 WRNEYLTWDPKEFGGISTINVNVDKVWVPDIYLYN 36
>SB_54061| Best HMM Match : Neur_chan_memb (HMM E-Value=2.3e-32)
Length = 363
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/50 (24%), Positives = 26/50 (52%)
Frame = +3
Query: 429 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFV 578
+ ++G+ SW +I + + + +P D Q+C FGS + + ++ V
Sbjct: 10 IDSDGTNSWYAPTEIKSICQIDITYFPFDAQSCPIIFGSWTYTGNYLNLV 59
>SB_15521| Best HMM Match : Neur_chan_LBD (HMM E-Value=1.1e-15)
Length = 296
Score = 29.5 bits (63), Expect = 4.0
Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 3/62 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 521
+ +W P NA D + NG V + RL I+ + L +P+D+Q
Sbjct: 32 DEIWIPSTYFFNAKKAYFHDVTTENYLLMIKPNGDVFYSVRLTITMACKLTLQMFPHDVQ 91
Query: 522 TC 527
C
Sbjct: 92 VC 93
>SB_5179| Best HMM Match : Neur_chan_memb (HMM E-Value=3.5e-08)
Length = 428
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +3
Query: 222 RHANIRESEST-VRIQADLQMNWIDKRLSWNAG-EWGCSTWLVSSERLWRPDVVLLN 386
R+++ ++S++ + + W D L WN G V +W PD+ L+N
Sbjct: 10 RYSSCQDSKAQELTTNLRIYQEWKDPNLKWNKSIAQGVEEIFVDPSDIWTPDIALMN 66
>SB_4912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 257 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 174
HG LG S+S + G+++ D+GVGGGV
Sbjct: 91 HGHLG----SVSMIMGKMNNDYGVGGGV 114
>SB_50413| Best HMM Match : GRP (HMM E-Value=0.15)
Length = 487
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 257 HGGLGLTNVSMSQMQGQVDYDFGVGGGV 174
HG LG S+S + G+++ D+GVGGGV
Sbjct: 358 HGHLG----SVSMIMGKMNNDYGVGGGV 381
>SB_53420| Best HMM Match : Hist_deacetyl (HMM E-Value=0)
Length = 360
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 333 TWLVSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNG 443
TWL+ +WRPD+VL +A D L R ++++NG
Sbjct: 272 TWLLD---MWRPDIVLYDAGVDPHVDDVLGRLKLTDNG 306
>SB_20985| Best HMM Match : Neur_chan_memb (HMM E-Value=4.3e-10)
Length = 517
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 527
+W PD V ++A+ + + + V+ G V W R + M L +P D QTC
Sbjct: 38 VWVPDTVFVDASHAYMHNVMVANHKLDVTPGGRVFWGTRATLIARCHMNLRRYPMDEQTC 97
>SB_35882| Best HMM Match : Neur_chan_memb (HMM E-Value=8.8e-26)
Length = 360
Score = 29.1 bits (62), Expect = 5.3
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 471 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDXMDFVIDKRIYXMFRVR 614
+ T ++ + ++P D Q C FGS H+ + ++ + D++ + + R
Sbjct: 5 VVTLCTINVSDFPFDTQQCKLTFGSWQHDGNEINLINDRKQALLAKTR 52
>SB_25129| Best HMM Match : 7tm_1 (HMM E-Value=2.4e-24)
Length = 540
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/65 (35%), Positives = 29/65 (44%)
Frame = +2
Query: 116 RKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPAFETC*HS*VRVHRANTGRSSNELDRQ 295
R+ N H R A + SG P R SQ T HS VR R N G S+ DR+
Sbjct: 425 RQTNPARNHHRSASVSNMSGPPRRGTGASQVGRP-RTSTHSDVRESRDNPGMKSDSRDRE 483
Query: 296 TTELE 310
+ + E
Sbjct: 484 SRDSE 488
>SB_11346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1706
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = -1
Query: 470 VQALYPGDGAVIRYTGAESVVPGGGCSRV*QYHVRP-PQAFRGHQPSAAAP-LPCVPTQS 297
VQ + DG + Y S VP G S + V+P QA G +P A P +P T +
Sbjct: 1172 VQQVSASDGLCVTYAVGPSAVPAGIPSTLLLTGVKPVQQASSGVRPVAVTPRIPVTLTPN 1231
Query: 296 FVDP 285
+ P
Sbjct: 1232 AIRP 1235
>SB_30491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -1
Query: 242 LTNVSMSQMQGQVDYDFGVGGGVPIVRCEERVDHE 138
L+++S +G VD FGV +R +++D+E
Sbjct: 594 LSHISGGDKEGDVDLHFGVNSQTGAIRLNKKLDYE 628
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,680,408
Number of Sequences: 59808
Number of extensions: 490558
Number of successful extensions: 1456
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2681370225
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -